BLASTX nr result

ID: Coptis21_contig00017811 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017811
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18544.3| unnamed protein product [Vitis vinifera]              167   1e-39
ref|XP_002267287.1| PREDICTED: tyrosine-protein phosphatase non-...   167   1e-39
emb|CAJ77612.1| protein tyrosine phosphatase [Fagus sylvatica]        163   1e-38
ref|XP_002887394.1| hypothetical protein ARALYDRAFT_339406 [Arab...   162   3e-38
ref|NP_974127.1| tyrosine phosphatase 1 [Arabidopsis thaliana] g...   161   6e-38

>emb|CBI18544.3| unnamed protein product [Vitis vinifera]
          Length = 342

 Score =  167 bits (422), Expect = 1e-39
 Identities = 81/124 (65%), Positives = 94/124 (75%), Gaps = 6/124 (4%)
 Frame = -3

Query: 359 DHNRVILKS------HGSGYINASFIKAGSSERVSEFIATQGPLPQTYQDFWEMVIQYRC 198
           D  RV+L S         GYINASFI+  S+E +S FIATQGPLP TY+DFWEMVIQY C
Sbjct: 98  DKTRVVLNSCKDYRPSARGYINASFIETSSTESISRFIATQGPLPHTYEDFWEMVIQYHC 157

Query: 197 PVIVMLTKLVDNCTMVKCGDYFQVQDGSKEFGKISVSTKWTRTTDTSLILRCLEVKYKES 18
           PVIVMLT+LVDN   VKCGDYFQ +DG +EFG I + TKW +TT+TSL+LR LEV YKES
Sbjct: 158 PVIVMLTRLVDNYKTVKCGDYFQAEDGPREFGNIFIVTKWIKTTETSLVLRHLEVNYKES 217

Query: 17  DETS 6
           +E S
Sbjct: 218 EEPS 221


>ref|XP_002267287.1| PREDICTED: tyrosine-protein phosphatase non-receptor type 20-like
           [Vitis vinifera]
          Length = 339

 Score =  167 bits (422), Expect = 1e-39
 Identities = 81/124 (65%), Positives = 94/124 (75%), Gaps = 6/124 (4%)
 Frame = -3

Query: 359 DHNRVILKS------HGSGYINASFIKAGSSERVSEFIATQGPLPQTYQDFWEMVIQYRC 198
           D  RV+L S         GYINASFI+  S+E +S FIATQGPLP TY+DFWEMVIQY C
Sbjct: 98  DKTRVVLNSCKDYRPSARGYINASFIETSSTESISRFIATQGPLPHTYEDFWEMVIQYHC 157

Query: 197 PVIVMLTKLVDNCTMVKCGDYFQVQDGSKEFGKISVSTKWTRTTDTSLILRCLEVKYKES 18
           PVIVMLT+LVDN   VKCGDYFQ +DG +EFG I + TKW +TT+TSL+LR LEV YKES
Sbjct: 158 PVIVMLTRLVDNYKTVKCGDYFQAEDGPREFGNIFIVTKWIKTTETSLVLRHLEVNYKES 217

Query: 17  DETS 6
           +E S
Sbjct: 218 EEPS 221


>emb|CAJ77612.1| protein tyrosine phosphatase [Fagus sylvatica]
          Length = 330

 Score =  163 bits (413), Expect = 1e-38
 Identities = 81/122 (66%), Positives = 94/122 (77%), Gaps = 6/122 (4%)
 Frame = -3

Query: 359 DHNRVILKS------HGSGYINASFIKAGSSERVSEFIATQGPLPQTYQDFWEMVIQYRC 198
           D NRV+L S         GYINASFI   SSE +S+FIATQGPLPQTY+DFWEMV+Q RC
Sbjct: 89  DKNRVVLNSCKDYRPAAKGYINASFITTSSSESISQFIATQGPLPQTYEDFWEMVMQNRC 148

Query: 197 PVIVMLTKLVDNCTMVKCGDYFQVQDGSKEFGKISVSTKWTRTTDTSLILRCLEVKYKES 18
           PV+VMLT+LVD   MVKCGDYFQ +DG +E G I + TKW +T DTSL+LR LEVKYKES
Sbjct: 149 PVVVMLTRLVDK--MVKCGDYFQAEDGPREIGNIHIVTKWIKTIDTSLVLRHLEVKYKES 206

Query: 17  DE 12
           +E
Sbjct: 207 EE 208


>ref|XP_002887394.1| hypothetical protein ARALYDRAFT_339406 [Arabidopsis lyrata subsp.
           lyrata] gi|297333235|gb|EFH63653.1| hypothetical protein
           ARALYDRAFT_339406 [Arabidopsis lyrata subsp. lyrata]
          Length = 342

 Score =  162 bits (410), Expect = 3e-38
 Identities = 76/122 (62%), Positives = 95/122 (77%), Gaps = 6/122 (4%)
 Frame = -3

Query: 359 DHNRVIL------KSHGSGYINASFIKAGSSERVSEFIATQGPLPQTYQDFWEMVIQYRC 198
           D NR++L      +S   GY+NAS IK   SE +S+FIATQGPLP T +DFWEMVIQ  C
Sbjct: 100 DKNRIVLNPCKDYRSSAKGYVNASLIKTSDSESISQFIATQGPLPHTMEDFWEMVIQQHC 159

Query: 197 PVIVMLTKLVDNCTMVKCGDYFQVQDGSKEFGKISVSTKWTRTTDTSLILRCLEVKYKES 18
           P+IVMLT+LVDN   VKCGDYFQ +DGS+EFG ISV+TKW ++T+TSL+LR LEV YKE+
Sbjct: 160 PIIVMLTRLVDNNRTVKCGDYFQAEDGSREFGNISVTTKWIKSTETSLMLRNLEVNYKET 219

Query: 17  DE 12
           ++
Sbjct: 220 ED 221


>ref|NP_974127.1| tyrosine phosphatase 1 [Arabidopsis thaliana]
           gi|332197120|gb|AEE35241.1| tyrosine phosphatase 1
           [Arabidopsis thaliana]
          Length = 277

 Score =  161 bits (407), Expect = 6e-38
 Identities = 76/120 (63%), Positives = 93/120 (77%), Gaps = 4/120 (3%)
 Frame = -3

Query: 359 DHNRVILK----SHGSGYINASFIKAGSSERVSEFIATQGPLPQTYQDFWEMVIQYRCPV 192
           D NR++L     S   GY+NAS IK   SE +S+FIATQGPLP T +DFWEMVIQ  CP+
Sbjct: 100 DKNRIVLNPCKDSSAKGYVNASLIKTSESESISQFIATQGPLPHTMEDFWEMVIQQHCPI 159

Query: 191 IVMLTKLVDNCTMVKCGDYFQVQDGSKEFGKISVSTKWTRTTDTSLILRCLEVKYKESDE 12
           IVMLT+LVDN   VKCGDYFQ +DG +EFG IS++TKW +TTDTSL+LR LEV YKE+++
Sbjct: 160 IVMLTRLVDNNRTVKCGDYFQDEDGPREFGNISLTTKWIKTTDTSLMLRNLEVNYKETED 219


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