BLASTX nr result

ID: Coptis21_contig00017805 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017805
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509397.1| predicted protein [Micromonas sp. RCC299] gi...   164   2e-48
ref|XP_003061371.1| predicted protein [Micromonas pusilla CCMP15...   164   2e-48
emb|CCO20677.1| predicted protein [Bathycoccus prasinos]              164   3e-48
dbj|BAJ94469.1| predicted protein [Hordeum vulgare subsp. vulgare]    162   5e-48
ref|XP_003424117.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-pro...   163   1e-47

>ref|XP_002509397.1| predicted protein [Micromonas sp. RCC299] gi|226524675|gb|ACO70655.1|
            predicted protein [Micromonas sp. RCC299]
          Length = 2336

 Score =  164 bits (416), Expect(2) = 2e-48
 Identities = 78/94 (82%), Positives = 87/94 (92%), Gaps = 1/94 (1%)
 Frame = -1

Query: 281  YGKIFNNQMVWFVDDTNVYRVAVHKTFEGNVAPKPMNGAIFIFNTQTGQMFLKVIHTSVW 102
            YG++F+NQ +WFVDDTNVYRV +HKTFEGN+  KP+NGAIFIFN +TGQ+FLKVIHTSVW
Sbjct: 1755 YGELFSNQTIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVW 1814

Query: 101  AGQKCLGQLAKWKTAEEVAALVRSLP-EEQPKQI 3
            AGQK LGQLAKWKTAEEVAALVRSLP EEQPKQI
Sbjct: 1815 AGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQI 1848



 Score = 52.8 bits (125), Expect(2) = 2e-48
 Identities = 25/30 (83%), Positives = 27/30 (90%)
 Frame = -2

Query: 370  PALCVLREHIRKGLQLCSSEPTEPYLSSQN 281
            PAL VLRE +RKGLQL SSEPTEPYL+SQN
Sbjct: 1725 PALYVLRERVRKGLQLYSSEPTEPYLNSQN 1754


>ref|XP_003061371.1| predicted protein [Micromonas pusilla CCMP1545]
            gi|226456701|gb|EEH54001.1| predicted protein [Micromonas
            pusilla CCMP1545]
          Length = 2333

 Score =  164 bits (416), Expect(2) = 2e-48
 Identities = 78/94 (82%), Positives = 87/94 (92%), Gaps = 1/94 (1%)
 Frame = -1

Query: 281  YGKIFNNQMVWFVDDTNVYRVAVHKTFEGNVAPKPMNGAIFIFNTQTGQMFLKVIHTSVW 102
            YG++F+NQ +WFVDDTNVYRV +HKTFEGN+  KP+NGAIFIFN +TGQ+FLKVIHTSVW
Sbjct: 1754 YGELFSNQTIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVW 1813

Query: 101  AGQKCLGQLAKWKTAEEVAALVRSLP-EEQPKQI 3
            AGQK LGQLAKWKTAEEVAALVRSLP EEQPKQI
Sbjct: 1814 AGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQI 1847



 Score = 52.8 bits (125), Expect(2) = 2e-48
 Identities = 25/30 (83%), Positives = 27/30 (90%)
 Frame = -2

Query: 370  PALCVLREHIRKGLQLCSSEPTEPYLSSQN 281
            PAL VLRE +RKGLQL SSEPTEPYL+SQN
Sbjct: 1724 PALYVLRERVRKGLQLYSSEPTEPYLNSQN 1753


>emb|CCO20677.1| predicted protein [Bathycoccus prasinos]
          Length = 2412

 Score =  164 bits (415), Expect(2) = 3e-48
 Identities = 77/94 (81%), Positives = 87/94 (92%), Gaps = 1/94 (1%)
 Frame = -1

Query: 281  YGKIFNNQMVWFVDDTNVYRVAVHKTFEGNVAPKPMNGAIFIFNTQTGQMFLKVIHTSVW 102
            YG++F+NQ +WF+DDTNVYRV +HKTFEGN+  KP+NGAIFIFN +TGQ+FLKVIHTSVW
Sbjct: 1825 YGELFSNQCIWFIDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVW 1884

Query: 101  AGQKCLGQLAKWKTAEEVAALVRSLP-EEQPKQI 3
            AGQK LGQLAKWKTAEEVAALVRSLP EEQPKQI
Sbjct: 1885 AGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQI 1918



 Score = 52.8 bits (125), Expect(2) = 3e-48
 Identities = 25/30 (83%), Positives = 27/30 (90%)
 Frame = -2

Query: 370  PALCVLREHIRKGLQLCSSEPTEPYLSSQN 281
            PAL VLRE +RKGLQL SSEPTEPYL+SQN
Sbjct: 1795 PALYVLRERVRKGLQLYSSEPTEPYLNSQN 1824


>dbj|BAJ94469.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 707

 Score =  162 bits (409), Expect(2) = 5e-48
 Identities = 75/94 (79%), Positives = 86/94 (91%), Gaps = 1/94 (1%)
 Frame = -1

Query: 281 YGKIFNNQMVWFVDDTNVYRVAVHKTFEGNVAPKPMNGAIFIFNTQTGQMFLKVIHTSVW 102
           YG++F+NQ +WFVDDTNVYRV +HKTFEGN+  KP+NGAIFIFN +TGQ+FLKVIHTS W
Sbjct: 268 YGELFSNQTIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSTW 327

Query: 101 AGQKCLGQLAKWKTAEEVAALVRSLP-EEQPKQI 3
           AGQK LGQLAKWKTAEEVAAL+RSLP EEQPKQ+
Sbjct: 328 AGQKRLGQLAKWKTAEEVAALIRSLPIEEQPKQL 361



 Score = 54.3 bits (129), Expect(2) = 5e-48
 Identities = 27/30 (90%), Positives = 27/30 (90%)
 Frame = -2

Query: 370 PALCVLREHIRKGLQLCSSEPTEPYLSSQN 281
           PAL VLRE IRKGLQL SSEPTEPYLSSQN
Sbjct: 238 PALYVLRERIRKGLQLYSSEPTEPYLSSQN 267


>ref|XP_003424117.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing-splicing factor 8
            [Nasonia vitripennis]
          Length = 2380

 Score =  163 bits (412), Expect(2) = 1e-47
 Identities = 76/94 (80%), Positives = 87/94 (92%), Gaps = 1/94 (1%)
 Frame = -1

Query: 281  YGKIFNNQMVWFVDDTNVYRVAVHKTFEGNVAPKPMNGAIFIFNTQTGQMFLKVIHTSVW 102
            YG++F NQ++WFVDDTNVYRV +HKTFEGN+  KP+NGAIFIFN +TGQ+FLK+IHTSVW
Sbjct: 1813 YGELFCNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVW 1872

Query: 101  AGQKCLGQLAKWKTAEEVAALVRSLP-EEQPKQI 3
            AGQK LGQLAKWKTAEEVAAL+RSLP EEQPKQI
Sbjct: 1873 AGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQI 1906



 Score = 52.0 bits (123), Expect(2) = 1e-47
 Identities = 26/30 (86%), Positives = 26/30 (86%)
 Frame = -2

Query: 370  PALCVLREHIRKGLQLCSSEPTEPYLSSQN 281
            PAL VLRE IRK LQL SSEPTEPYLSSQN
Sbjct: 1783 PALYVLRERIRKALQLYSSEPTEPYLSSQN 1812


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