BLASTX nr result

ID: Coptis21_contig00017790 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017790
         (993 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519035.1| conserved hypothetical protein [Ricinus comm...   402   e-110
ref|XP_002305811.1| predicted protein [Populus trichocarpa] gi|2...   400   e-109
ref|XP_002305810.1| predicted protein [Populus trichocarpa] gi|2...   399   e-109
ref|XP_002267898.2| PREDICTED: uncharacterized protein LOC100265...   391   e-106
emb|CBI41050.3| unnamed protein product [Vitis vinifera]              391   e-106

>ref|XP_002519035.1| conserved hypothetical protein [Ricinus communis]
            gi|223541698|gb|EEF43246.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1255

 Score =  402 bits (1032), Expect = e-110
 Identities = 211/337 (62%), Positives = 247/337 (73%), Gaps = 7/337 (2%)
 Frame = +3

Query: 3    QGGHSGSTSLNESSQVSAGLQGAIAKITSTTDGVSSLASKPMS-PSTFTPISINTGTFPG 179
            QGG +G+TS   S+Q+ A +QGAIAKI+ST DGVS+    P+S PS+F PISINTGTFPG
Sbjct: 848  QGGQNGTTSSTGSTQMQAWVQGAIAKISSTNDGVSNATPNPISGPSSFMPISINTGTFPG 907

Query: 180  IPAVRLVGDCHFLHRLCQLLYFCYIFWRRQMRRHTGGAHRYPDSNMQKPQPVAPGKAEEP 359
             PAVRL+GDCHFLHRLCQLL FC+ F R Q+ R  G A R  D+NMQKPQ  APGK EE 
Sbjct: 908  TPAVRLIGDCHFLHRLCQLLLFCFFFRRTQLPRFIGVAQRSTDTNMQKPQSGAPGKVEEA 967

Query: 360  NTASTRAGPGLVKSEEVQASRAEL----GVKVFERPKNRAQRLGSGNAGHGYTYEEVKVL 527
            N+ S++    +V+S+EVQ +R       G  V E P  R+ RLG GNAG GYT+EEVKVL
Sbjct: 968  NSVSSKPAQAMVRSDEVQTARGGQLVPGGKGVEEGPAGRS-RLGYGNAGQGYTFEEVKVL 1026

Query: 528  FLILMELCTRTTGLAHPFPASEVGGNNIQIHLHYIDGNYTVLQEVVEASLLPYIQNMPRP 707
            FLILM+LC RT  LAHP P S+VG +NIQ+ LHYI+GNYTVL EVVEASL P++QNMPRP
Sbjct: 1027 FLILMDLCRRTAALAHPLPVSQVGSSNIQVRLHYINGNYTVLPEVVEASLGPHMQNMPRP 1086

Query: 708  RGADAAGMLLHELELHSPAEKWHKRNMFGGPWSDTE-CDLLDDTLRPSS-SXXXXXXXXX 881
            RGADAAG+LL ELELH P+E+WH+RNMFGGPWSD E     DDT R SS +         
Sbjct: 1087 RGADAAGLLLRELELHPPSEEWHRRNMFGGPWSDPEDITSADDTPRMSSYTDSLDFSSLE 1146

Query: 882  XXXXXXXPQGLWPRKRRLSEREAAFGLKTSVGLGAYL 992
                     GLWPRKRR+SER+AAFGL TSVGLGAYL
Sbjct: 1147 NCDVYYGVNGLWPRKRRMSERDAAFGLNTSVGLGAYL 1183


>ref|XP_002305811.1| predicted protein [Populus trichocarpa] gi|222848775|gb|EEE86322.1|
            predicted protein [Populus trichocarpa]
          Length = 607

 Score =  400 bits (1028), Expect = e-109
 Identities = 206/335 (61%), Positives = 240/335 (71%), Gaps = 5/335 (1%)
 Frame = +3

Query: 3    QGGHSGSTSLNESSQVSAGLQGAIAKITSTTDGVSSLASKPMS-PSTFTPISINTGTFPG 179
            QGG SG TS   S+Q+ A +QGAIAKI+STTDGVS+    P+S PS+F PISINTGTFPG
Sbjct: 149  QGGQSGGTSSTGSTQMQAWVQGAIAKISSTTDGVSTATPNPISGPSSFMPISINTGTFPG 208

Query: 180  IPAVRLVGDCHFLHRLCQLLYFCYIFWRRQMRRHTGGAHRYP-DSNMQKPQPVAPGKAEE 356
             PAVRL+GDCHFLHRLCQLL FC+ F R Q+ R  GG  R P D+N QKPQ  A GK EE
Sbjct: 209  TPAVRLIGDCHFLHRLCQLLLFCFFFRRTQLPRFAGGTQRNPTDTNAQKPQSGAAGKVEE 268

Query: 357  PNTASTRAGPGLVKSEEVQASRAEL---GVKVFERPKNRAQRLGSGNAGHGYTYEEVKVL 527
             NT S++  P +V+S+E QA R      G K  E       R+G+GNAG GY++EEV VL
Sbjct: 269  INTVSSKPAPAVVRSDEGQAVRGSQVVPGAKAVEEGPAGRHRVGNGNAGQGYSFEEVTVL 328

Query: 528  FLILMELCTRTTGLAHPFPASEVGGNNIQIHLHYIDGNYTVLQEVVEASLLPYIQNMPRP 707
            FLILM+LC RT  L HP P S+VG +NIQ+ LHYIDGNYTVL EVVEASL P++QNMPRP
Sbjct: 329  FLILMDLCRRTASLGHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRP 388

Query: 708  RGADAAGMLLHELELHSPAEKWHKRNMFGGPWSDTECDLLDDTLRPSSSXXXXXXXXXXX 887
            RGADAAG+LL ELELH P+E+WH+RNMFGGPWSD E    DDT + +S+           
Sbjct: 389  RGADAAGLLLRELELHPPSEEWHRRNMFGGPWSDPEDIGSDDTSKLNSTNSLDFSSLENC 448

Query: 888  XXXXXPQGLWPRKRRLSEREAAFGLKTSVGLGAYL 992
                   GLWPRKRRLSER+AA GL TS GLGAYL
Sbjct: 449  DVYYGAHGLWPRKRRLSERDAAVGLNTSAGLGAYL 483


>ref|XP_002305810.1| predicted protein [Populus trichocarpa] gi|222848774|gb|EEE86321.1|
            predicted protein [Populus trichocarpa]
          Length = 1328

 Score =  399 bits (1024), Expect = e-109
 Identities = 207/335 (61%), Positives = 238/335 (71%), Gaps = 5/335 (1%)
 Frame = +3

Query: 3    QGGHSGSTSLNESSQVSAGLQGAIAKITSTTDGVSSLASKPMS-PSTFTPISINTGTFPG 179
            QGG SG TS   S+Q+ A +QGAIAKI+STTDGVS+    P+S PS+F PISINTGTFPG
Sbjct: 922  QGGQSGGTSSTGSTQMQAWVQGAIAKISSTTDGVSTATPNPISGPSSFMPISINTGTFPG 981

Query: 180  IPAVRLVGDCHFLHRLCQLLYFCYIFWRRQMRRHTGGAHRYP-DSNMQKPQPVAPGKAEE 356
             PAVRL+GDCHFLHRLCQLL FC+ F R Q+ R  GG  R P D+N QKPQ  A GK EE
Sbjct: 982  TPAVRLIGDCHFLHRLCQLLLFCFFFRRTQLPRFAGGTQRNPTDTNAQKPQSGAAGKVEE 1041

Query: 357  PNTASTRAGPGLVKSEEVQASRAEL---GVKVFERPKNRAQRLGSGNAGHGYTYEEVKVL 527
             NT S++  P  V+S+E QA R      G K  E       R+GSGNAG GY+ EEV VL
Sbjct: 1042 INTVSSKPAPAAVRSDEGQAVRGSQVVPGAKAVEEGPAGRHRVGSGNAGQGYSSEEVTVL 1101

Query: 528  FLILMELCTRTTGLAHPFPASEVGGNNIQIHLHYIDGNYTVLQEVVEASLLPYIQNMPRP 707
            FLILM+LC RT  L HP P S+VG +NIQ+ LHYIDGNYTVL EVVEASL P++QNMPRP
Sbjct: 1102 FLILMDLCRRTASLGHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRP 1161

Query: 708  RGADAAGMLLHELELHSPAEKWHKRNMFGGPWSDTECDLLDDTLRPSSSXXXXXXXXXXX 887
            RGADAAG+LL ELELH P+E+WH+RNMFGGPWSD E    DDT + +S+           
Sbjct: 1162 RGADAAGLLLRELELHPPSEEWHRRNMFGGPWSDPEDMGSDDTSKLNSTNSLDFSSLENC 1221

Query: 888  XXXXXPQGLWPRKRRLSEREAAFGLKTSVGLGAYL 992
                   GLWPRKRRLSER+AA GL TS GLGAYL
Sbjct: 1222 DVYYGAHGLWPRKRRLSERDAAVGLNTSAGLGAYL 1256


>ref|XP_002267898.2| PREDICTED: uncharacterized protein LOC100265327, partial [Vitis
            vinifera]
          Length = 785

 Score =  391 bits (1005), Expect = e-106
 Identities = 205/336 (61%), Positives = 239/336 (71%), Gaps = 6/336 (1%)
 Frame = +3

Query: 3    QGGHSGSTSLNESSQVSAGLQGAIAKITSTTDGVSSLASKPMS-PSTFTPISINTGTFPG 179
            QGG SG+TS   S+Q+ A +QGAIAKI+STTDGV +    P++ P +F PISINTGTFPG
Sbjct: 379  QGGQSGTTSSTGSTQMQAWVQGAIAKISSTTDGVPNSTPNPINGPPSFIPISINTGTFPG 438

Query: 180  IPAVRLVGDCHFLHRLCQLLYFCYIFWRRQMRRHTGGAHRYPDSNMQKPQPVAPGKAEEP 359
             PAVRL+GDCHFLHRLCQLL FC+ F R Q+ R  G A R  D+NM KPQ     K EE 
Sbjct: 439  TPAVRLIGDCHFLHRLCQLLLFCFFFRRTQLPRVIGVAQRNADTNMHKPQATGTSKVEEN 498

Query: 360  NTASTRAGPGLVKSEEVQASRAEL---GVKVFERPKNRAQRLGSGNAGHGYTYEEVKVLF 530
            +T S +    + +SEE Q +RA     G K  E       RLGSGNAG GYT+EEVKVLF
Sbjct: 499  STVSNKLASAMARSEEGQVARANHAINGAKGAEEGPTGRSRLGSGNAGQGYTFEEVKVLF 558

Query: 531  LILMELCTRTTGLAHPFPASEVGGNNIQIHLHYIDGNYTVLQEVVEASLLPYIQNMPRPR 710
            LILM+LC RT  L HP P S+VG NNIQ+ LHYIDG+YTVL EVVEASL P++QNMPRPR
Sbjct: 559  LILMDLCRRTAALQHPLPISQVGSNNIQVRLHYIDGSYTVLPEVVEASLGPHMQNMPRPR 618

Query: 711  GADAAGMLLHELELHSPAEKWHKRNMFGGPWSDTE-CDLLDDTLRPSS-SXXXXXXXXXX 884
            GADAAG+LL ELELH PAE+WH+RNMFGGPWSD E    +DDT + S+ +          
Sbjct: 619  GADAAGLLLRELELHPPAEEWHRRNMFGGPWSDPEDMGSVDDTPKLSTYADPLESNSFEN 678

Query: 885  XXXXXXPQGLWPRKRRLSEREAAFGLKTSVGLGAYL 992
                   +GLWPRKRRLSER+AAFGL TSVGLGAYL
Sbjct: 679  NDTYYGARGLWPRKRRLSERDAAFGLNTSVGLGAYL 714


>emb|CBI41050.3| unnamed protein product [Vitis vinifera]
          Length = 792

 Score =  391 bits (1005), Expect = e-106
 Identities = 205/336 (61%), Positives = 239/336 (71%), Gaps = 6/336 (1%)
 Frame = +3

Query: 3    QGGHSGSTSLNESSQVSAGLQGAIAKITSTTDGVSSLASKPMS-PSTFTPISINTGTFPG 179
            QGG SG+TS   S+Q+ A +QGAIAKI+STTDGV +    P++ P +F PISINTGTFPG
Sbjct: 386  QGGQSGTTSSTGSTQMQAWVQGAIAKISSTTDGVPNSTPNPINGPPSFIPISINTGTFPG 445

Query: 180  IPAVRLVGDCHFLHRLCQLLYFCYIFWRRQMRRHTGGAHRYPDSNMQKPQPVAPGKAEEP 359
             PAVRL+GDCHFLHRLCQLL FC+ F R Q+ R  G A R  D+NM KPQ     K EE 
Sbjct: 446  TPAVRLIGDCHFLHRLCQLLLFCFFFRRTQLPRVIGVAQRNADTNMHKPQATGTSKVEEN 505

Query: 360  NTASTRAGPGLVKSEEVQASRAEL---GVKVFERPKNRAQRLGSGNAGHGYTYEEVKVLF 530
            +T S +    + +SEE Q +RA     G K  E       RLGSGNAG GYT+EEVKVLF
Sbjct: 506  STVSNKLASAMARSEEGQVARANHAINGAKGAEEGPTGRSRLGSGNAGQGYTFEEVKVLF 565

Query: 531  LILMELCTRTTGLAHPFPASEVGGNNIQIHLHYIDGNYTVLQEVVEASLLPYIQNMPRPR 710
            LILM+LC RT  L HP P S+VG NNIQ+ LHYIDG+YTVL EVVEASL P++QNMPRPR
Sbjct: 566  LILMDLCRRTAALQHPLPISQVGSNNIQVRLHYIDGSYTVLPEVVEASLGPHMQNMPRPR 625

Query: 711  GADAAGMLLHELELHSPAEKWHKRNMFGGPWSDTE-CDLLDDTLRPSS-SXXXXXXXXXX 884
            GADAAG+LL ELELH PAE+WH+RNMFGGPWSD E    +DDT + S+ +          
Sbjct: 626  GADAAGLLLRELELHPPAEEWHRRNMFGGPWSDPEDMGSVDDTPKLSTYADPLESNSFEN 685

Query: 885  XXXXXXPQGLWPRKRRLSEREAAFGLKTSVGLGAYL 992
                   +GLWPRKRRLSER+AAFGL TSVGLGAYL
Sbjct: 686  NDTYYGARGLWPRKRRLSERDAAFGLNTSVGLGAYL 721


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