BLASTX nr result

ID: Coptis21_contig00017780 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017780
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633963.1| PREDICTED: golgin candidate 4-like isoform 2...    75   4e-12
emb|CBI40445.3| unnamed protein product [Vitis vinifera]               75   4e-12
ref|XP_002279017.1| PREDICTED: golgin candidate 4-like isoform 1...    75   4e-12
ref|XP_003529912.1| PREDICTED: golgin candidate 3-like [Glycine ...    74   1e-11
ref|XP_003624094.1| Golgin candidate [Medicago truncatula] gi|35...    73   2e-11

>ref|XP_003633963.1| PREDICTED: golgin candidate 4-like isoform 2 [Vitis vinifera]
          Length = 776

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 42/74 (56%), Positives = 46/74 (62%)
 Frame = -3

Query: 253 VLDLMVRMLGFSEEDKQRIGVAQQXXXXXXXXXXXXXXXXXXXXXXXGSSADGSSQVPSD 74
           VLDLMVRMLGFS+EDKQRIGVAQQ                       GSS +  + V S+
Sbjct: 609 VLDLMVRMLGFSDEDKQRIGVAQQGTGKGVVRGVLGLPGRLVGGILGGSSGEAQANVASE 668

Query: 73  NQSFADLWVDFLLK 32
           NQSFADLWVDFLLK
Sbjct: 669 NQSFADLWVDFLLK 682


>emb|CBI40445.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 42/74 (56%), Positives = 46/74 (62%)
 Frame = -3

Query: 253 VLDLMVRMLGFSEEDKQRIGVAQQXXXXXXXXXXXXXXXXXXXXXXXGSSADGSSQVPSD 74
           VLDLMVRMLGFS+EDKQRIGVAQQ                       GSS +  + V S+
Sbjct: 622 VLDLMVRMLGFSDEDKQRIGVAQQGTGKGVVRGVLGLPGRLVGGILGGSSGEAQANVASE 681

Query: 73  NQSFADLWVDFLLK 32
           NQSFADLWVDFLLK
Sbjct: 682 NQSFADLWVDFLLK 695


>ref|XP_002279017.1| PREDICTED: golgin candidate 4-like isoform 1 [Vitis vinifera]
          Length = 790

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 42/74 (56%), Positives = 46/74 (62%)
 Frame = -3

Query: 253 VLDLMVRMLGFSEEDKQRIGVAQQXXXXXXXXXXXXXXXXXXXXXXXGSSADGSSQVPSD 74
           VLDLMVRMLGFS+EDKQRIGVAQQ                       GSS +  + V S+
Sbjct: 623 VLDLMVRMLGFSDEDKQRIGVAQQGTGKGVVRGVLGLPGRLVGGILGGSSGEAQANVASE 682

Query: 73  NQSFADLWVDFLLK 32
           NQSFADLWVDFLLK
Sbjct: 683 NQSFADLWVDFLLK 696


>ref|XP_003529912.1| PREDICTED: golgin candidate 3-like [Glycine max]
          Length = 782

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 42/74 (56%), Positives = 45/74 (60%)
 Frame = -3

Query: 253 VLDLMVRMLGFSEEDKQRIGVAQQXXXXXXXXXXXXXXXXXXXXXXXGSSADGSSQVPSD 74
           VLDLMVRMLGFS+EDKQRIG AQQ                       GSS D ++   SD
Sbjct: 613 VLDLMVRMLGFSDEDKQRIGGAQQGSGKGVVRGVLGLPGRLVGGILGGSSTDAAANAGSD 672

Query: 73  NQSFADLWVDFLLK 32
           NQSFADLWVDFLLK
Sbjct: 673 NQSFADLWVDFLLK 686


>ref|XP_003624094.1| Golgin candidate [Medicago truncatula] gi|355499109|gb|AES80312.1|
           Golgin candidate [Medicago truncatula]
          Length = 755

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 41/74 (55%), Positives = 45/74 (60%)
 Frame = -3

Query: 253 VLDLMVRMLGFSEEDKQRIGVAQQXXXXXXXXXXXXXXXXXXXXXXXGSSADGSSQVPSD 74
           VLDLMVRMLGFS EDKQRIG+AQQ                       GSS + +  V SD
Sbjct: 590 VLDLMVRMLGFSNEDKQRIGLAQQGPGKGVVRGVLGLPGRLVGGILGGSSTESAVNVGSD 649

Query: 73  NQSFADLWVDFLLK 32
           NQSFAD+WVDFLLK
Sbjct: 650 NQSFADMWVDFLLK 663


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