BLASTX nr result
ID: Coptis21_contig00017741
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00017741
(686 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002534293.1| nucleic acid binding protein, putative [Rici... 173 7e-48
ref|XP_002283220.2| PREDICTED: uncharacterized protein LOC100260... 165 2e-44
ref|XP_003534121.1| PREDICTED: uncharacterized protein LOC100800... 159 5e-42
ref|XP_003528998.1| PREDICTED: uncharacterized protein LOC100785... 157 3e-40
ref|XP_002318320.1| predicted protein [Populus trichocarpa] gi|2... 157 5e-39
>ref|XP_002534293.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223525559|gb|EEF28090.1| nucleic acid binding
protein, putative [Ricinus communis]
Length = 442
Score = 173 bits (438), Expect(2) = 7e-48
Identities = 97/149 (65%), Positives = 108/149 (72%)
Frame = +1
Query: 1 HATQLQLSIGSSDHGEKNEVSKSKINNNDAVKSPPKNKNTNEESMSIASRMKEQAQEQLK 180
H+TQLQLSIGSSD EKNE S N DA K P+ N +E+ S A R+KEQA+EQL+
Sbjct: 274 HSTQLQLSIGSSDLSEKNE-SHIASTNKDAGKLSPRESNNSEKPESAALRLKEQAREQLR 332
Query: 181 LAMAEKAYAEEARQQAKRXXXXXXXXXXXXXXXXXXIELAEQEFTNAKRIRQQAQAELDK 360
LAMAEKAYAEEARQ+AKR IELAEQEF NAKRIRQQAQAE DK
Sbjct: 333 LAMAEKAYAEEARQRAKRQ-----------------IELAEQEFANAKRIRQQAQAEFDK 375
Query: 361 AQILKEHATKQINSTILQITCHACKQQFQ 447
AQ L+EHA KQINST+LQ+TCHACKQQFQ
Sbjct: 376 AQALREHAMKQINSTLLQVTCHACKQQFQ 404
Score = 43.9 bits (102), Expect(2) = 7e-48
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +2
Query: 542 TPPDENSLVAASYMSSAITEGEGENDN 622
TPPDENSLV S+MSSA+TEGE ENDN
Sbjct: 407 TPPDENSLVL-SHMSSAVTEGEVENDN 432
>ref|XP_002283220.2| PREDICTED: uncharacterized protein LOC100260988 [Vitis vinifera]
Length = 455
Score = 165 bits (417), Expect(2) = 2e-44
Identities = 94/151 (62%), Positives = 110/151 (72%), Gaps = 2/151 (1%)
Frame = +1
Query: 1 HATQLQLSIGSSDHGEKNEVSKSKINNND--AVKSPPKNKNTNEESMSIASRMKEQAQEQ 174
H+TQLQLSIGSSD EKNE S + N + A P+ NT+E++ A+R+KE+A+EQ
Sbjct: 277 HSTQLQLSIGSSDFNEKNESSIINLINKEYSAPARCPRECNTSEKATFGAARLKEEAREQ 336
Query: 175 LKLAMAEKAYAEEARQQAKRXXXXXXXXXXXXXXXXXXIELAEQEFTNAKRIRQQAQAEL 354
L+LAM EK YAEEARQQAKR IELA++EFT+AKRIRQQAQAEL
Sbjct: 337 LRLAMEEKVYAEEARQQAKRQ-----------------IELADKEFTHAKRIRQQAQAEL 379
Query: 355 DKAQILKEHATKQINSTILQITCHACKQQFQ 447
DKAQ LKEHA KQINSTILQITCHACKQQF+
Sbjct: 380 DKAQALKEHARKQINSTILQITCHACKQQFR 410
Score = 40.0 bits (92), Expect(2) = 2e-44
Identities = 23/36 (63%), Positives = 26/36 (72%)
Frame = +2
Query: 545 PPDENSLVAASYMSSAITEGEGENDNRNHHGKRTQT 652
PPDENSLV SYMSSAITEGE +N +H R +T
Sbjct: 419 PPDENSLVL-SYMSSAITEGE-VVENNHHRSVRAKT 452
>ref|XP_003534121.1| PREDICTED: uncharacterized protein LOC100800187 [Glycine max]
Length = 474
Score = 159 bits (403), Expect(2) = 5e-42
Identities = 88/150 (58%), Positives = 103/150 (68%)
Frame = +1
Query: 1 HATQLQLSIGSSDHGEKNEVSKSKINNNDAVKSPPKNKNTNEESMSIASRMKEQAQEQLK 180
H+T LQLSIGSSD EKNE +++ + +N N + + R++EQA+E L+
Sbjct: 299 HSTHLQLSIGSSDMSEKNESNRNSSEKSSNSNINDQNNNNKQSNNMALLRVQEQAREHLR 358
Query: 181 LAMAEKAYAEEARQQAKRXXXXXXXXXXXXXXXXXXIELAEQEFTNAKRIRQQAQAELDK 360
+AMAEKAYAEEAR+QAKR IELAEQEFTNAKRIRQQAQAELDK
Sbjct: 359 IAMAEKAYAEEARKQAKRQ-----------------IELAEQEFTNAKRIRQQAQAELDK 401
Query: 361 AQILKEHATKQINSTILQITCHACKQQFQA 450
A LKEHA KQINST+LQITCH CKQQFQA
Sbjct: 402 AYSLKEHAMKQINSTMLQITCHGCKQQFQA 431
Score = 37.7 bits (86), Expect(2) = 5e-42
Identities = 24/40 (60%), Positives = 30/40 (75%), Gaps = 4/40 (10%)
Frame = +2
Query: 533 SSSTPPDENSLVAASYMSSAI-TEGEGENDNRNH---HGK 640
+++T PDENSLV SY+SSAI TEG GE +N N+ HGK
Sbjct: 433 NAATTPDENSLV-LSYVSSAITTEGGGEVENDNNAKDHGK 471
>ref|XP_003528998.1| PREDICTED: uncharacterized protein LOC100785333 [Glycine max]
Length = 483
Score = 157 bits (396), Expect(2) = 3e-40
Identities = 92/156 (58%), Positives = 106/156 (67%), Gaps = 6/156 (3%)
Frame = +1
Query: 1 HATQLQLSIGSSDHGEKNEVSKSKINNNDAVKSPPKNKNTNEESMSIAS------RMKEQ 162
H+T LQLSIGSSD EKN+ S N N + KS + N N+++ S R++EQ
Sbjct: 306 HSTHLQLSIGSSDMSEKNDQS----NRNSSEKSSNNSNNINDQNNKQQSNNMALLRVQEQ 361
Query: 163 AQEQLKLAMAEKAYAEEARQQAKRXXXXXXXXXXXXXXXXXXIELAEQEFTNAKRIRQQA 342
A+E L++AMAEKAYAEEAR+QAKR IELAEQEFTNAKRIRQQA
Sbjct: 362 AREHLRIAMAEKAYAEEARKQAKRQ-----------------IELAEQEFTNAKRIRQQA 404
Query: 343 QAELDKAQILKEHATKQINSTILQITCHACKQQFQA 450
Q ELDKA LKEHA KQINST+LQITCH CKQQFQA
Sbjct: 405 QVELDKAYALKEHAMKQINSTMLQITCHFCKQQFQA 440
Score = 34.3 bits (77), Expect(2) = 3e-40
Identities = 20/32 (62%), Positives = 25/32 (78%), Gaps = 2/32 (6%)
Frame = +2
Query: 533 SSSTPPDENSLVAASYMSSAITE--GEGENDN 622
+++T PD+NSLV SY+SSAIT GE ENDN
Sbjct: 443 ATTTSPDDNSLVL-SYVSSAITTEGGEVENDN 473
>ref|XP_002318320.1| predicted protein [Populus trichocarpa] gi|222858993|gb|EEE96540.1|
predicted protein [Populus trichocarpa]
Length = 456
Score = 157 bits (397), Expect(2) = 5e-39
Identities = 91/151 (60%), Positives = 105/151 (69%), Gaps = 1/151 (0%)
Frame = +1
Query: 1 HATQLQLSIGSSDHGEKNEVSKSKINNNDAVKSPPKNKNTNEESMSIASRMKEQA-QEQL 177
H+TQLQLSIGSSD ++NE + S + + SP +N N + ASR+KEQ +EQL
Sbjct: 286 HSTQLQLSIGSSDVSDRNESNISYTDKDHGKSSPRENNNGSPRPELGASRLKEQVIREQL 345
Query: 178 KLAMAEKAYAEEARQQAKRXXXXXXXXXXXXXXXXXXIELAEQEFTNAKRIRQQAQAELD 357
+AMAEK +AEEARQQAKR IELAEQEF NAKRIRQQAQAELD
Sbjct: 346 MMAMAEKIHAEEARQQAKRQ-----------------IELAEQEFANAKRIRQQAQAELD 388
Query: 358 KAQILKEHATKQINSTILQITCHACKQQFQA 450
KAQ LK+HA KQINSTILQITCHACKQ+F A
Sbjct: 389 KAQALKQHAIKQINSTILQITCHACKQKFHA 419
Score = 30.0 bits (66), Expect(2) = 5e-39
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +2
Query: 542 TPPDENSLVAASYMSSAITEGEGENDN 622
T DENSLV SYMSSA TE E E+ N
Sbjct: 421 TQADENSLVM-SYMSSATTEDEVEHIN 446