BLASTX nr result

ID: Coptis21_contig00017729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017729
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32094.3| unnamed protein product [Vitis vinifera]              110   2e-23
ref|XP_002280233.2| PREDICTED: uncharacterized protein LOC100242...   112   3e-23
ref|XP_002266599.2| PREDICTED: uncharacterized protein LOC100255...   110   2e-22
ref|XP_002534525.1| nuclease, putative [Ricinus communis] gi|223...   107   1e-21
dbj|BAJ93907.1| predicted protein [Hordeum vulgare subsp. vulgare]    105   5e-21

>emb|CBI32094.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score =  110 bits (274), Expect(2) = 2e-23
 Identities = 53/78 (67%), Positives = 61/78 (78%), Gaps = 4/78 (5%)
 Frame = +1

Query: 1   EKDAFYVVRKGDIVGVYKTLNDCQAQV----CDTSVSVYKGYSLPKEAEEYLTSRGLKNA 168
           EKDAF+VVRKGD+VGVYKT +DCQAQV    CD  VSVYKGY LPK+ EEYL SRGL+NA
Sbjct: 147 EKDAFFVVRKGDVVGVYKTFSDCQAQVGSSICDPPVSVYKGYYLPKDTEEYLVSRGLRNA 206

Query: 169 SYVINAGDAKDDIFSNLI 222
            Y I A D K+D+F  L+
Sbjct: 207 LYTIRAADLKEDLFGKLM 224



 Score = 23.9 bits (50), Expect(2) = 2e-23
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +3

Query: 207 FQQPDSCKVNISSKPSPSKRLQEVFG 284
           FQQ  S K  I SK  P +  QEV G
Sbjct: 228 FQQTASSKGEILSKDLPRESSQEVMG 253


>ref|XP_002280233.2| PREDICTED: uncharacterized protein LOC100242330 [Vitis vinifera]
           gi|296087711|emb|CBI34967.3| unnamed protein product
           [Vitis vinifera]
          Length = 287

 Score =  112 bits (280), Expect = 3e-23
 Identities = 56/77 (72%), Positives = 62/77 (80%), Gaps = 4/77 (5%)
 Frame = +1

Query: 1   EKDAFYVVRKGDIVGVYKTLNDCQAQ----VCDTSVSVYKGYSLPKEAEEYLTSRGLKNA 168
           EKDAFYVVRKGDIVG+YK+ ++CQAQ    VCD SVSVYKGY LPK+AE +L S GLKNA
Sbjct: 4   EKDAFYVVRKGDIVGLYKSFSECQAQAGFSVCDPSVSVYKGYCLPKDAEVFLASHGLKNA 63

Query: 169 SYVINAGDAKDDIFSNL 219
           SYVINA D K DIF  L
Sbjct: 64  SYVINAADVKGDIFGKL 80


>ref|XP_002266599.2| PREDICTED: uncharacterized protein LOC100255243 [Vitis vinifera]
          Length = 453

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/78 (67%), Positives = 61/78 (78%), Gaps = 4/78 (5%)
 Frame = +1

Query: 1   EKDAFYVVRKGDIVGVYKTLNDCQAQV----CDTSVSVYKGYSLPKEAEEYLTSRGLKNA 168
           EKDAF+VVRKGD+VGVYKT +DCQAQV    CD  VSVYKGY LPK+ EEYL SRGL+NA
Sbjct: 4   EKDAFFVVRKGDVVGVYKTFSDCQAQVGSSICDPPVSVYKGYYLPKDTEEYLVSRGLRNA 63

Query: 169 SYVINAGDAKDDIFSNLI 222
            Y I A D K+D+F  L+
Sbjct: 64  LYTIRAADLKEDLFGKLM 81


>ref|XP_002534525.1| nuclease, putative [Ricinus communis] gi|223525106|gb|EEF27855.1|
           nuclease, putative [Ricinus communis]
          Length = 262

 Score =  107 bits (266), Expect = 1e-21
 Identities = 52/78 (66%), Positives = 60/78 (76%), Gaps = 4/78 (5%)
 Frame = +1

Query: 1   EKDAFYVVRKGDIVGVYKTLNDCQAQV----CDTSVSVYKGYSLPKEAEEYLTSRGLKNA 168
           EKDAF+VVRKGD+VGVYK+  DCQAQV    CD  VSVYKGYSL K+ EEYL SRGL+NA
Sbjct: 4   EKDAFFVVRKGDVVGVYKSFTDCQAQVGSSVCDPPVSVYKGYSLSKDTEEYLVSRGLQNA 63

Query: 169 SYVINAGDAKDDIFSNLI 222
            Y I A D K+D+F  L+
Sbjct: 64  LYAIRAQDLKEDLFGTLV 81


>dbj|BAJ93907.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 266

 Score =  105 bits (261), Expect = 5e-21
 Identities = 50/75 (66%), Positives = 59/75 (78%), Gaps = 4/75 (5%)
 Frame = +1

Query: 7   DAFYVVRKGDIVGVYKTLNDCQAQV----CDTSVSVYKGYSLPKEAEEYLTSRGLKNASY 174
           D FYVVRKGD++G+Y  L DCQAQV    CD SV+VYKGYSL K+ EEYL +RGLKNA Y
Sbjct: 7   DPFYVVRKGDVIGIYNNLADCQAQVSNSVCDPSVTVYKGYSLRKDTEEYLAARGLKNAPY 66

Query: 175 VINAGDAKDDIFSNL 219
            INA DAKD++F +L
Sbjct: 67  SINAADAKDELFDDL 81


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