BLASTX nr result

ID: Coptis21_contig00017620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017620
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26976.3| unnamed protein product [Vitis vinifera]              115   5e-24
ref|XP_002282955.1| PREDICTED: reticulon-like protein B9-like [V...   115   5e-24
gb|EAY98925.1| hypothetical protein OsI_20880 [Oryza sativa Indi...   108   6e-22
ref|XP_003528960.1| PREDICTED: reticulon-like protein B9-like [G...   107   1e-21
ref|NP_001238292.1| uncharacterized protein LOC100306402 [Glycin...   106   2e-21

>emb|CBI26976.3| unnamed protein product [Vitis vinifera]
          Length = 267

 Score =  115 bits (287), Expect = 5e-24
 Identities = 52/76 (68%), Positives = 65/76 (85%)
 Frame = -1

Query: 240 TPGRLFRRERPLHSILGGGQVANVLLWRNKNVSAAILIAFTAIWFLFEVVEYHFLTLLCH 61
           TP RLF  ++ +H++LGGG+VA++LLWRNK VSAAILI FT IWFLFEV+EYHF+TLLC+
Sbjct: 65  TPIRLFDHQKSIHALLGGGKVADILLWRNKYVSAAILIGFTIIWFLFEVLEYHFVTLLCY 124

Query: 60  ISITVMLVIFIWSNGA 13
             + +ML IFIWSNGA
Sbjct: 125 SMLFLMLAIFIWSNGA 140


>ref|XP_002282955.1| PREDICTED: reticulon-like protein B9-like [Vitis vinifera]
          Length = 216

 Score =  115 bits (287), Expect = 5e-24
 Identities = 52/76 (68%), Positives = 65/76 (85%)
 Frame = -1

Query: 240 TPGRLFRRERPLHSILGGGQVANVLLWRNKNVSAAILIAFTAIWFLFEVVEYHFLTLLCH 61
           TP RLF  ++ +H++LGGG+VA++LLWRNK VSAAILI FT IWFLFEV+EYHF+TLLC+
Sbjct: 14  TPIRLFDHQKSIHALLGGGKVADILLWRNKYVSAAILIGFTIIWFLFEVLEYHFVTLLCY 73

Query: 60  ISITVMLVIFIWSNGA 13
             + +ML IFIWSNGA
Sbjct: 74  SMLFLMLAIFIWSNGA 89


>gb|EAY98925.1| hypothetical protein OsI_20880 [Oryza sativa Indica Group]
           gi|222632469|gb|EEE64601.1| hypothetical protein
           OsJ_19453 [Oryza sativa Japonica Group]
          Length = 220

 Score =  108 bits (269), Expect = 6e-22
 Identities = 47/77 (61%), Positives = 63/77 (81%)
 Frame = -1

Query: 231 RLFRRERPLHSILGGGQVANVLLWRNKNVSAAILIAFTAIWFLFEVVEYHFLTLLCHISI 52
           RLF R++P+H ILGG +VA+++LWR++N+SA IL   T IWFLF+V EY+ +TLLCHI++
Sbjct: 18  RLFHRQKPVHKILGGRKVADIMLWRDRNLSAGILAGATLIWFLFDVAEYNLVTLLCHIAL 77

Query: 51  TVMLVIFIWSNGAALFD 1
             MLV+FIWSN A LFD
Sbjct: 78  LGMLVLFIWSNAAPLFD 94


>ref|XP_003528960.1| PREDICTED: reticulon-like protein B9-like [Glycine max]
          Length = 222

 Score =  107 bits (266), Expect = 1e-21
 Identities = 47/76 (61%), Positives = 62/76 (81%)
 Frame = -1

Query: 231 RLFRRERPLHSILGGGQVANVLLWRNKNVSAAILIAFTAIWFLFEVVEYHFLTLLCHISI 52
           +LF  E+P+H +LGGG+VA++LLWR++ VS A+L   T IWFLFE+VEY+F+ LLCHISI
Sbjct: 19  KLFGHEKPIHEVLGGGKVADMLLWRDRYVSGALLGGMTVIWFLFEIVEYNFVALLCHISI 78

Query: 51  TVMLVIFIWSNGAALF 4
           T MLV+FIWS  A +F
Sbjct: 79  TTMLVLFIWSTVADIF 94


>ref|NP_001238292.1| uncharacterized protein LOC100306402 [Glycine max]
           gi|255628421|gb|ACU14555.1| unknown [Glycine max]
          Length = 212

 Score =  106 bits (264), Expect = 2e-21
 Identities = 47/77 (61%), Positives = 65/77 (84%)
 Frame = -1

Query: 237 PGRLFRRERPLHSILGGGQVANVLLWRNKNVSAAILIAFTAIWFLFEVVEYHFLTLLCHI 58
           PG L  R+RPLH++LGGG++A++LLW++K +SAA++  F+ IWFLFEVVEY+FLTLLCHI
Sbjct: 12  PG-LLDRQRPLHAVLGGGKLADILLWKDKILSAAMVAGFSIIWFLFEVVEYNFLTLLCHI 70

Query: 57  SITVMLVIFIWSNGAAL 7
            + VML++F+W N A L
Sbjct: 71  LMAVMLILFVWYNAAGL 87


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