BLASTX nr result

ID: Coptis21_contig00017598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017598
         (723 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK94840.1| unknown [Populus trichocarpa]                          190   3e-46
ref|XP_002322115.1| predicted protein [Populus trichocarpa] gi|2...   187   1e-45
ref|XP_002317865.1| predicted protein [Populus trichocarpa] gi|2...   185   7e-45
ref|XP_003525184.1| PREDICTED: uncharacterized protein LOC100820...   182   5e-44
ref|XP_002278985.1| PREDICTED: uncharacterized protein LOC100257...   182   5e-44

>gb|ABK94840.1| unknown [Populus trichocarpa]
          Length = 162

 Score =  190 bits (482), Expect = 3e-46
 Identities = 93/163 (57%), Positives = 121/163 (74%), Gaps = 2/163 (1%)
 Frame = +1

Query: 121 MGNTASCAPSXXXXXXXXXXXXDGRVQVFTKPVKAVEIMLEHPRHFVCDFSDLKVGHRIP 300
           MGN  SCAPS             G +Q++TKPVKA E+MLE+P  FVCD + LKVGHR+ 
Sbjct: 1   MGNATSCAPSIISNGVVKVLTNGGNLQIYTKPVKAAELMLENPGQFVCDSTSLKVGHRVH 60

Query: 301 GLAADEELERRRLYFILPIEMLYSVLVNDEMDALSCKASRVMKNGGANNIGKIFPIFSEF 480
           GL AD++LERR+ YF+LP+E+LYSVL ++EM +L+ KA++ +K    NN GKIFP+ SEF
Sbjct: 61  GLLADDQLERRQFYFVLPMELLYSVLTHEEMSSLTYKATKALK---YNNFGKIFPVLSEF 117

Query: 481 CIFPSDSKALDSV-RDSNHVERYSKQRSWKPALDTILETP-CR 603
           CIFPS+ K +DS+  +   +ERYSKQRSWKPAL+TI+ETP CR
Sbjct: 118 CIFPSEGKTMDSMATEPQPMERYSKQRSWKPALETIVETPNCR 160


>ref|XP_002322115.1| predicted protein [Populus trichocarpa] gi|222869111|gb|EEF06242.1|
           predicted protein [Populus trichocarpa]
          Length = 162

 Score =  187 bits (476), Expect = 1e-45
 Identities = 92/163 (56%), Positives = 120/163 (73%), Gaps = 2/163 (1%)
 Frame = +1

Query: 121 MGNTASCAPSXXXXXXXXXXXXDGRVQVFTKPVKAVEIMLEHPRHFVCDFSDLKVGHRIP 300
           MGN  SCAPS             G +Q++TKPVKA E+MLE+P  FVCD + LKVGHR+ 
Sbjct: 1   MGNATSCAPSIISNGVVKVLTNGGNLQIYTKPVKAAELMLENPGQFVCDSTSLKVGHRVH 60

Query: 301 GLAADEELERRRLYFILPIEMLYSVLVNDEMDALSCKASRVMKNGGANNIGKIFPIFSEF 480
           GL AD++LERR+ YF+LP+E+LYSVL ++EM +L+ KA++ +K    NN  KIFP+ SEF
Sbjct: 61  GLLADDQLERRQFYFVLPMELLYSVLTHEEMSSLTYKATKALK---YNNFSKIFPVLSEF 117

Query: 481 CIFPSDSKALDSV-RDSNHVERYSKQRSWKPALDTILETP-CR 603
           CIFPS+ K +DS+  +   +ERYSKQRSWKPAL+TI+ETP CR
Sbjct: 118 CIFPSEGKTMDSMATEPQPMERYSKQRSWKPALETIVETPNCR 160


>ref|XP_002317865.1| predicted protein [Populus trichocarpa] gi|222858538|gb|EEE96085.1|
           predicted protein [Populus trichocarpa]
          Length = 163

 Score =  185 bits (470), Expect = 7e-45
 Identities = 93/164 (56%), Positives = 121/164 (73%), Gaps = 3/164 (1%)
 Frame = +1

Query: 121 MGNTASCAPSXXXXXXXXXXXX--DGRVQVFTKPVKAVEIMLEHPRHFVCDFSDLKVGHR 294
           MGN  SCAPS              +G +Q++TKPVKA E+MLE+P  FVCD + LKVG+R
Sbjct: 1   MGNATSCAPSIISSNGVVKVLFSDNGNLQIYTKPVKAAELMLENPGQFVCDSASLKVGYR 60

Query: 295 IPGLAADEELERRRLYFILPIEMLYSVLVNDEMDALSCKASRVMKNGGANNIGKIFPIFS 474
           I  L+AD+ELERR+LYF+LP E+LYSVL ++E+ +L+ KA++ +K    NN GKIFP+ S
Sbjct: 61  IHCLSADDELERRQLYFVLPTELLYSVLTHEELSSLTYKATKALK---YNNFGKIFPVLS 117

Query: 475 EFCIFPSDSKALDSV-RDSNHVERYSKQRSWKPALDTILETPCR 603
           EFCIFPS+ K  DS+  +   +ERYSKQRSWKPAL+TI+ETPCR
Sbjct: 118 EFCIFPSEGKTTDSMATEPQPMERYSKQRSWKPALETIVETPCR 161


>ref|XP_003525184.1| PREDICTED: uncharacterized protein LOC100820022 [Glycine max]
          Length = 167

 Score =  182 bits (463), Expect = 5e-44
 Identities = 92/166 (55%), Positives = 119/166 (71%), Gaps = 8/166 (4%)
 Frame = +1

Query: 121 MGNTASCAPSXXXXXXXXXXXXDGRVQVFTKPVKAVEIMLEHPRHFVCDFSDLKVGHRIP 300
           MGN ASC PS            DGR++ +TKP++A E+MLE+   FVCD S LKVGHRI 
Sbjct: 1   MGNVASCTPSLTPNGVFKVLFLDGRLEAYTKPMRAAELMLEYSGQFVCDSSYLKVGHRIH 60

Query: 301 GLAADEELERRRLYFILPIEMLYSVLVNDEMDALSCKASRVMKNGGANNIGKIFPIFSEF 480
           GL AD++LE+R+ YF+LPIE+L+SVL ++EM +L+ KASR  K+   NN+GKIFP+FSEF
Sbjct: 61  GLLADDQLEKRKFYFLLPIELLFSVLTHEEMSSLNYKASRATKHASFNNLGKIFPVFSEF 120

Query: 481 CIFPSDSKALDS-------VRDSN-HVERYSKQRSWKPALDTILET 594
           C+FPS+ K L+        VRD    V+RYSKQRSW+PAL+TI ET
Sbjct: 121 CMFPSELKRLEEADNQLQVVRDPEPAVKRYSKQRSWRPALETIDET 166


>ref|XP_002278985.1| PREDICTED: uncharacterized protein LOC100257591 [Vitis vinifera]
          Length = 167

 Score =  182 bits (463), Expect = 5e-44
 Identities = 94/167 (56%), Positives = 126/167 (75%), Gaps = 5/167 (2%)
 Frame = +1

Query: 121 MGNTASCAPSXXXXXXXXXXXX-DGRVQVFTKPVKAVEIMLEHPRHFVCDFSDLKVGHRI 297
           MGN  SCAPS             DGR++V+T+PVKA E+ML+ P HFVC+ +DLKVG RI
Sbjct: 1   MGNATSCAPSILSNTGVVKVLSSDGRLEVYTRPVKAAELMLDKPGHFVCNSTDLKVGQRI 60

Query: 298 PGLAADEELERRRLYFILPIEMLYSVLVNDEMDALSCKASRVMKN-GGANNIGKIFPI-F 471
           PGL+ADEELE R+LYF+LP+EMLYSVL ++E+ +LS KAS+V+K+   +NN G+IFP+  
Sbjct: 61  PGLSADEELELRQLYFLLPMEMLYSVLTHEEISSLSYKASKVVKHRSTSNNFGRIFPLGL 120

Query: 472 SEFCIFPSDSKALDSVRDSN--HVERYSKQRSWKPALDTILETPCRM 606
           S+FC+FPS++K L S    +   V+RYS+QRSW PAL+TI+ETP R+
Sbjct: 121 SDFCMFPSETKTLASPTTDHPEPVQRYSRQRSWSPALETIVETPSRL 167