BLASTX nr result

ID: Coptis21_contig00017573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017573
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517183.1| conserved hypothetical protein [Ricinus comm...   221   9e-56
ref|XP_002280710.1| PREDICTED: uncharacterized protein LOC100261...   214   1e-53
ref|XP_002311838.1| predicted protein [Populus trichocarpa] gi|2...   211   7e-53
ref|XP_002302119.1| predicted protein [Populus trichocarpa] gi|2...   210   1e-52
ref|XP_003541625.1| PREDICTED: uncharacterized protein LOC100806...   202   4e-50

>ref|XP_002517183.1| conserved hypothetical protein [Ricinus communis]
           gi|223543818|gb|EEF45346.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 453

 Score =  221 bits (562), Expect = 9e-56
 Identities = 104/167 (62%), Positives = 126/167 (75%), Gaps = 5/167 (2%)
 Frame = +2

Query: 104 MSYFEVLKKFKR---FEPAS--LAFFVITVFGFLCCFFYLDYRVVVSKGFQYNGKGQQRF 268
           M  FE+ KKFKR   FEP+   L FF++TV   +CCFFY D+R  ++KG++  GK + R+
Sbjct: 13  MQVFEIFKKFKRLRLFEPSVGVLGFFLVTVC-VICCFFYFDFRDAITKGYKVPGKSE-RY 70

Query: 269 LWLGFEDGDEVEKSSRVGFLGKGGEKCDLFSGNWVWDEQYPLYESKDCQFLDSGFRCSEN 448
           +WL F +   +    RV FLG+ G+ CD+F G WVWD+ YPLY+SKDC FLD GFRC+EN
Sbjct: 71  MWLQFNESSPIR---RVEFLGQEGDGCDVFDGEWVWDDNYPLYQSKDCSFLDEGFRCTEN 127

Query: 449 GRPDNFYTKWRWQPKDCNLPRFDAKTMLEKLRNRRLVFVGDSIGRNQ 589
           GRPD FYTKWRWQPK CNLPRFDAK MLEKLRN+RLVF GDSIGRNQ
Sbjct: 128 GRPDLFYTKWRWQPKFCNLPRFDAKLMLEKLRNKRLVFAGDSIGRNQ 174


>ref|XP_002280710.1| PREDICTED: uncharacterized protein LOC100261302 [Vitis vinifera]
           gi|297736996|emb|CBI26197.3| unnamed protein product
           [Vitis vinifera]
          Length = 446

 Score =  214 bits (544), Expect = 1e-53
 Identities = 103/167 (61%), Positives = 124/167 (74%), Gaps = 5/167 (2%)
 Frame = +2

Query: 104 MSYFEVLKKFKRF---EPAS--LAFFVITVFGFLCCFFYLDYRVVVSKGFQYNGKGQQRF 268
           + +F+V KKFKRF   EP+   L FF +TV   +CCFFYLDYR   +KGF ++ + + RF
Sbjct: 13  LPFFDVFKKFKRFRLLEPSVGVLGFFFVTV-SVICCFFYLDYRAA-AKGFLFSSQSE-RF 69

Query: 269 LWLGFEDGDEVEKSSRVGFLGKGGEKCDLFSGNWVWDEQYPLYESKDCQFLDSGFRCSEN 448
           +W  F    E     RV FL + G+ CD+F+G WVWDE YPLY+SKDC F+D GFRCSEN
Sbjct: 70  MWFRFGGSSE---DRRVDFLAEQGDGCDVFNGGWVWDEAYPLYQSKDCSFMDDGFRCSEN 126

Query: 449 GRPDNFYTKWRWQPKDCNLPRFDAKTMLEKLRNRRLVFVGDSIGRNQ 589
           GRPD FYTKWRWQPKDCNLPRF+A  MLE+LRN+RL FVGDSIGRNQ
Sbjct: 127 GRPDMFYTKWRWQPKDCNLPRFNATLMLERLRNKRLAFVGDSIGRNQ 173


>ref|XP_002311838.1| predicted protein [Populus trichocarpa] gi|222851658|gb|EEE89205.1|
           predicted protein [Populus trichocarpa]
          Length = 339

 Score =  211 bits (537), Expect = 7e-53
 Identities = 107/169 (63%), Positives = 121/169 (71%), Gaps = 7/169 (4%)
 Frame = +2

Query: 104 MSYFEVLKKFKRF-----EPAS--LAFFVITVFGFLCCFFYLDYRVVVSKGFQYNGKGQQ 262
           M  FE+ KKFKRF     EP+   L FF +TV   +  FFYLDYR V+ K F   GK + 
Sbjct: 13  MQLFEIFKKFKRFQLRFFEPSLGVLGFFFVTVC-VIFSFFYLDYRAVIVKEFIVPGKSE- 70

Query: 263 RFLWLGFEDGDEVEKSSRVGFLGKGGEKCDLFSGNWVWDEQYPLYESKDCQFLDSGFRCS 442
           RF+WL         K+ RV FL + G  CDLF G+WVWDE+YPLY+SKDC FLD GFRC+
Sbjct: 71  RFMWLQLNGSG---KNKRVEFLEEEGNGCDLFDGDWVWDEKYPLYQSKDCSFLDQGFRCT 127

Query: 443 ENGRPDNFYTKWRWQPKDCNLPRFDAKTMLEKLRNRRLVFVGDSIGRNQ 589
           ENGRPD FYTKWRWQPK CNLPRFDAK MLEKLRN+RLVF GDSIGRNQ
Sbjct: 128 ENGRPDLFYTKWRWQPKHCNLPRFDAKMMLEKLRNKRLVFAGDSIGRNQ 176


>ref|XP_002302119.1| predicted protein [Populus trichocarpa] gi|222843845|gb|EEE81392.1|
           predicted protein [Populus trichocarpa]
          Length = 515

 Score =  210 bits (535), Expect = 1e-52
 Identities = 101/175 (57%), Positives = 123/175 (70%), Gaps = 9/175 (5%)
 Frame = +2

Query: 92  PLSNMSYFEVLKKFKRFEPAS-----LAFFVITVFGFLCCFFYLDYRVVVSKGFQYNGKG 256
           P   M++ +  KK KR  P       L FF++TV   +CCFFYLDYR V ++G +++G  
Sbjct: 12  PRDTMTHLDFFKKLKRLNPLEPSLGILGFFLVTVL-LICCFFYLDYRSV-TRGLRHHG-- 67

Query: 257 QQRFLWLGFEDGDEVE----KSSRVGFLGKGGEKCDLFSGNWVWDEQYPLYESKDCQFLD 424
                W G       E     S R+GFL KGG+ CD+F GNWVWD+ YPLY+S+DC F+D
Sbjct: 68  ---ISWSGLVVPSSSELTGGDSGRLGFLDKGGDWCDIFDGNWVWDDNYPLYQSQDCSFID 124

Query: 425 SGFRCSENGRPDNFYTKWRWQPKDCNLPRFDAKTMLEKLRNRRLVFVGDSIGRNQ 589
           +GFRC ENGRPD+FYTKWRWQPK CNLPRFDA+ MLEKLRNRRLVFVGDS+GRNQ
Sbjct: 125 AGFRCLENGRPDSFYTKWRWQPKYCNLPRFDARLMLEKLRNRRLVFVGDSVGRNQ 179


>ref|XP_003541625.1| PREDICTED: uncharacterized protein LOC100806510 [Glycine max]
          Length = 439

 Score =  202 bits (513), Expect = 4e-50
 Identities = 98/158 (62%), Positives = 115/158 (72%), Gaps = 2/158 (1%)
 Frame = +2

Query: 122 LKKFKRFEPASLAFFVITVFGF-LCCFFYLDYRVVVSKGFQYNGKGQQRFLWLGFEDGDE 298
           +K+ + FEP+     V  V  F +C FFYLDYR +  K F ++G+  +RF W   + G  
Sbjct: 10  VKRLRLFEPSVGVGVVFLVSTFVICSFFYLDYRELAEK-FGFSGQPPERFTWSQEKRGSV 68

Query: 299 VEKSSRVGFLG-KGGEKCDLFSGNWVWDEQYPLYESKDCQFLDSGFRCSENGRPDNFYTK 475
            ++  RV FLG KGG +CDLF GNWVWDE YPLY+SKDC FLD GFRCSENGRPD FYTK
Sbjct: 69  EKRVHRVEFLGEKGGGECDLFEGNWVWDESYPLYQSKDCSFLDGGFRCSENGRPDLFYTK 128

Query: 476 WRWQPKDCNLPRFDAKTMLEKLRNRRLVFVGDSIGRNQ 589
           WRWQPK CNLPRF+A  MLE LRN+RLVF GDSIGRNQ
Sbjct: 129 WRWQPKACNLPRFNATKMLENLRNKRLVFAGDSIGRNQ 166


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