BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017568
         (2828 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270874.1| PREDICTED: F-box protein SKIP14 [Vitis vinif...   322   5e-85
emb|CBI40086.3| unnamed protein product [Vitis vinifera]              315   4e-83
ref|XP_002315636.1| predicted protein [Populus trichocarpa] gi|2...   312   3e-82
ref|XP_002266763.1| PREDICTED: F-box protein SKIP14 [Vitis vinif...   306   2e-80
emb|CBI27542.3| unnamed protein product [Vitis vinifera]              303   2e-79

>ref|XP_002270874.1| PREDICTED: F-box protein SKIP14 [Vitis vinifera]
          Length = 480

 Score =  322 bits (824), Expect = 5e-85
 Identities = 170/315 (53%), Positives = 207/315 (65%), Gaps = 2/315 (0%)
 Frame = +2

Query: 134  KLLSFNCEDMSASSHQSEQSGQGTATCPGVDEGAPNDGLLFALGYLCVWDLLSTERVCNS 313
            + LSF+      + +Q ++    T   P  + G P+D L F+L YL V DLL  ERVC S
Sbjct: 166  EFLSFSRHGNRINGNQEKEFQACTKVHPDDETGEPHDALFFSLAYLGVQDLLVVERVCRS 225

Query: 314  LRSAIQTDVLLWRNIHIDQSLSMKITDDALLRLSNRAQXXXXXXXXXXXXRITDNGLKRV 493
            L + +++D LLWRNI IDQ LS KITDDALL+L+ RAQ            RITD+GLKRV
Sbjct: 226  LCNVVRSDPLLWRNICIDQPLSDKITDDALLQLTGRAQGSLQGLSLVQCPRITDSGLKRV 285

Query: 494  LECNPKLKKLNVAGCIGLSIDGIVNNLKDFKSSGMSGIKHLRIGGRYGVNHKHFEELKSL 673
            LE NP+L KL V GC+ LS+D I+ NLK FKS+G  GIKHLRI G  GV  +HFEELK L
Sbjct: 286  LENNPRLTKLCVPGCVRLSVDCILLNLKAFKSAGTLGIKHLRISGLNGVTDQHFEELKLL 345

Query: 674  ISADNCMQPKATKPRFYPYGHSSPSCEDDRAIDIEICPRCQNMRLVYDCPAESCQEKEPG 853
            +  DN  Q +  KPRFY       SC+DDRAIDIE+CPRCQ +RLVYDCP+ESCQ K   
Sbjct: 346  LGVDNHKQLRTHKPRFYHGEQLYLSCDDDRAIDIEVCPRCQKVRLVYDCPSESCQGKHQS 405

Query: 854  AQXXXXXXXXXXXXVECGRCLNDSEYEETFCLDVLCLDCWQQLLSCQKGQEK--GTYLEH 1027
            AQ              CGRC+ND +YEETFCLD+LCLDC++QLL+CQ+ QE+      +H
Sbjct: 406  AQLCRACTLCIARCFHCGRCINDCDYEETFCLDLLCLDCFKQLLNCQERQEEMGAPSSKH 465

Query: 1028 TIFHHETRYCFQLCG 1072
            TIFH ETRY F L G
Sbjct: 466  TIFHQETRYRFCLYG 480


>emb|CBI40086.3| unnamed protein product [Vitis vinifera]
          Length = 489

 Score =  315 bits (807), Expect = 4e-83
 Identities = 167/313 (53%), Positives = 204/313 (65%), Gaps = 2/313 (0%)
 Frame = +2

Query: 134  KLLSFNCEDMSASSHQSEQSGQGTATCPGVDEGAPNDGLLFALGYLCVWDLLSTERVCNS 313
            + LSF+      + +Q ++    T   P  + G P+D L F+L YL V DLL  ERVC S
Sbjct: 166  EFLSFSRHGNRINGNQEKEFQACTKVHPDDETGEPHDALFFSLAYLGVQDLLVVERVCRS 225

Query: 314  LRSAIQTDVLLWRNIHIDQSLSMKITDDALLRLSNRAQXXXXXXXXXXXXRITDNGLKRV 493
            L + +++D LLWRNI IDQ LS KITDDALL+L+ RAQ            RITD+GLKRV
Sbjct: 226  LCNVVRSDPLLWRNICIDQPLSDKITDDALLQLTGRAQGSLQGLSLVQCPRITDSGLKRV 285

Query: 494  LECNPKLKKLNVAGCIGLSIDGIVNNLKDFKSSGMSGIKHLRIGGRYGVNHKHFEELKSL 673
            LE NP+L KL V GC+ LS+D I+ NLK FKS+G  GIKHLRI G  GV  +HFEELK L
Sbjct: 286  LENNPRLTKLCVPGCVRLSVDCILLNLKAFKSAGTLGIKHLRISGLNGVTDQHFEELKLL 345

Query: 674  ISADNCMQPKATKPRFYPYGHSSPSCEDDRAIDIEICPRCQNMRLVYDCPAESCQEKEPG 853
            +  DN  Q +  KPRFY       SC+DDRAIDIE+CPRCQ +RLVYDCP+ESCQ K   
Sbjct: 346  LGVDNHKQLRTHKPRFYHGEQLYLSCDDDRAIDIEVCPRCQKVRLVYDCPSESCQGKHQS 405

Query: 854  AQXXXXXXXXXXXXVECGRCLNDSEYEETFCLDVLCLDCWQQLLSCQKGQEK--GTYLEH 1027
            AQ              CGRC+ND +YEETFCLD+LCLDC++QLL+CQ+ QE+      +H
Sbjct: 406  AQLCRACTLCIARCFHCGRCINDCDYEETFCLDLLCLDCFKQLLNCQERQEEMGAPSSKH 465

Query: 1028 TIFHHETRYCFQL 1066
            TIFH ET   F L
Sbjct: 466  TIFHQETSIPFLL 478


>ref|XP_002315636.1| predicted protein [Populus trichocarpa] gi|222864676|gb|EEF01807.1|
           predicted protein [Populus trichocarpa]
          Length = 449

 Score =  312 bits (800), Expect = 3e-82
 Identities = 157/272 (57%), Positives = 187/272 (68%), Gaps = 3/272 (1%)
 Frame = +2

Query: 185 EQSGQ---GTATCPGVDEGAPNDGLLFALGYLCVWDLLSTERVCNSLRSAIQTDVLLWRN 355
           E SG+   G   C   D+ AP+    FALGYL V DLL  E VC SLRS +Q+D LLWR+
Sbjct: 178 ESSGEFQNGHLVCSEGDKEAPHAAFAFALGYLGVRDLLVVETVCRSLRSTVQSDPLLWRS 237

Query: 356 IHIDQSLSMKITDDALLRLSNRAQXXXXXXXXXXXXRITDNGLKRVLECNPKLKKLNVAG 535
           IHIDQ L+ KITDD LL+L+NRAQ            RITD+GLK VLE NP+L KL+V  
Sbjct: 238 IHIDQPLNEKITDDVLLQLTNRAQGNLQCLSLVECPRITDDGLKHVLENNPRLTKLSVPA 297

Query: 536 CIGLSIDGIVNNLKDFKSSGMSGIKHLRIGGRYGVNHKHFEELKSLISADNCMQPKATKP 715
           C  LSI+GIV +LK FK++G  G+KHLRIGG YGV  KHFEEL  L+  D+ +Q  A KP
Sbjct: 298 CTRLSIEGIVTSLKAFKATGTHGVKHLRIGGLYGVTQKHFEELMFLLGPDSHIQQNAHKP 357

Query: 716 RFYPYGHSSPSCEDDRAIDIEICPRCQNMRLVYDCPAESCQEKEPGAQXXXXXXXXXXXX 895
            FY  G+   SCEDDRAIDIE+CPRCQN+RL+YDCP E CQ KE  +Q            
Sbjct: 358 HFYHRGNLYLSCEDDRAIDIEMCPRCQNLRLIYDCPVEGCQGKEHPSQACRACSLCIARC 417

Query: 896 VECGRCLNDSEYEETFCLDVLCLDCWQQLLSC 991
           V+CGRC+NDSEYEETFCL++LC DCW+QLL C
Sbjct: 418 VQCGRCINDSEYEETFCLELLCSDCWKQLLKC 449


>ref|XP_002266763.1| PREDICTED: F-box protein SKIP14 [Vitis vinifera]
          Length = 458

 Score =  306 bits (784), Expect = 2e-80
 Identities = 158/296 (53%), Positives = 197/296 (66%)
 Frame = +2

Query: 110  FALITDADKLLSFNCEDMSASSHQSEQSGQGTATCPGVDEGAPNDGLLFALGYLCVWDLL 289
            F  I   + +LS   E++  +S Q+E+  +   +C   D  AP+  + FALGYL + DLL
Sbjct: 155  FGPICVVEDVLSSGNENVCGASCQAEEFREFNGSCYDGDGAAPHAAVSFALGYLGLRDLL 214

Query: 290  STERVCNSLRSAIQTDVLLWRNIHIDQSLSMKITDDALLRLSNRAQXXXXXXXXXXXXRI 469
            S ERVC SLR+ +Q+D LLWR+IH+DQ L+ +ITDD LL+L+ RAQ            RI
Sbjct: 215  SVERVCRSLRATVQSDPLLWRSIHVDQPLNERITDDILLQLTRRAQGNLQGLHLVECPRI 274

Query: 470  TDNGLKRVLECNPKLKKLNVAGCIGLSIDGIVNNLKDFKSSGMSGIKHLRIGGRYGVNHK 649
            TD+GLKRVLE NP+L KL V GC  LSI+G+VN L+ F+S+G  GIKHLRIGG YGV HK
Sbjct: 275  TDDGLKRVLESNPRLTKLCVPGCTRLSIEGVVNMLRAFQSTGTPGIKHLRIGGLYGVAHK 334

Query: 650  HFEELKSLISADNCMQPKATKPRFYPYGHSSPSCEDDRAIDIEICPRCQNMRLVYDCPAE 829
            HFEELK L+  D   Q  A KP FY  G+     +DDRAIDIE CPRCQN+RLVYDCPA+
Sbjct: 335  HFEELKLLLGIDIHEQKNAHKPHFYNRGNFYLLGDDDRAIDIETCPRCQNLRLVYDCPAD 394

Query: 830  SCQEKEPGAQXXXXXXXXXXXXVECGRCLNDSEYEETFCLDVLCLDCWQQLLSCQK 997
             CQ KE  AQ            V+CGRC+ND EYEETFCL+ LC DC++Q   CQ+
Sbjct: 395  GCQVKENAAQVCRACTLCIARCVQCGRCINDGEYEETFCLEWLCSDCFKQQPQCQE 450


>emb|CBI27542.3| unnamed protein product [Vitis vinifera]
          Length = 400

 Score =  303 bits (776), Expect = 2e-79
 Identities = 154/281 (54%), Positives = 191/281 (67%)
 Frame = +2

Query: 155 EDMSASSHQSEQSGQGTATCPGVDEGAPNDGLLFALGYLCVWDLLSTERVCNSLRSAIQT 334
           E++  +S Q+E+  +   +C   D  AP+  + FALGYL + DLLS ERVC SLR+ +Q+
Sbjct: 112 ENVCGASCQAEEFREFNGSCYDGDGAAPHAAVSFALGYLGLRDLLSVERVCRSLRATVQS 171

Query: 335 DVLLWRNIHIDQSLSMKITDDALLRLSNRAQXXXXXXXXXXXXRITDNGLKRVLECNPKL 514
           D LLWR+IH+DQ L+ +ITDD LL+L+ RAQ            RITD+GLKRVLE NP+L
Sbjct: 172 DPLLWRSIHVDQPLNERITDDILLQLTRRAQGNLQGLHLVECPRITDDGLKRVLESNPRL 231

Query: 515 KKLNVAGCIGLSIDGIVNNLKDFKSSGMSGIKHLRIGGRYGVNHKHFEELKSLISADNCM 694
            KL V GC  LSI+G+VN L+ F+S+G  GIKHLRIGG YGV HKHFEELK L+  D   
Sbjct: 232 TKLCVPGCTRLSIEGVVNMLRAFQSTGTPGIKHLRIGGLYGVAHKHFEELKLLLGIDIHE 291

Query: 695 QPKATKPRFYPYGHSSPSCEDDRAIDIEICPRCQNMRLVYDCPAESCQEKEPGAQXXXXX 874
           Q  A KP FY  G+     +DDRAIDIE CPRCQN+RLVYDCPA+ CQ KE  AQ     
Sbjct: 292 QKNAHKPHFYNRGNFYLLGDDDRAIDIETCPRCQNLRLVYDCPADGCQVKENAAQVCRAC 351

Query: 875 XXXXXXXVECGRCLNDSEYEETFCLDVLCLDCWQQLLSCQK 997
                  V+CGRC+ND EYEETFCL+ LC DC++Q   CQ+
Sbjct: 352 TLCIARCVQCGRCINDGEYEETFCLEWLCSDCFKQQPQCQE 392