BLASTX nr result

ID: Coptis21_contig00017548 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017548
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147438.1| PREDICTED: uncharacterized protein LOC101217...    63   3e-08
ref|XP_002305043.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
emb|CAN78668.1| hypothetical protein VITISV_031288 [Vitis vinifera]    61   1e-07
ref|XP_002521341.1| conserved hypothetical protein [Ricinus comm...    57   1e-06

>ref|XP_004147438.1| PREDICTED: uncharacterized protein LOC101217056 [Cucumis sativus]
           gi|449527135|ref|XP_004170568.1| PREDICTED:
           uncharacterized LOC101217056 [Cucumis sativus]
          Length = 231

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 44/97 (45%), Positives = 56/97 (57%), Gaps = 7/97 (7%)
 Frame = -2

Query: 270 SNPPQEFLSHSPDFNAPPSNISKHDQN----IDEETEHSKDDIEQVLELLGLLEM--NKE 109
           S  P EFLS S    +PPS+  K + N    ID       DDI+++++LLGL +    KE
Sbjct: 78  SQAPLEFLSSSSQ--SPPSH-PKSESNPPKPIDRGQNRDVDDIQRLIQLLGLEDSCDEKE 134

Query: 108 EGKNETMNVNNGCGS-FYSKIVGVKGPKSEKEMERLD 1
            G     N   GC S FYSKIVG+KGPK  KE+ERL+
Sbjct: 135 FGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLN 171


>ref|XP_002305043.1| predicted protein [Populus trichocarpa] gi|222848007|gb|EEE85554.1|
           predicted protein [Populus trichocarpa]
          Length = 217

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 40/104 (38%), Positives = 56/104 (53%), Gaps = 14/104 (13%)
 Frame = -2

Query: 270 SNPPQEFLSHSPDFNAPPSNISKHDQNIDEETEHSKDDIEQVLELLGLLEMNK------- 112
           S PP  FLS  P   + P     + + I E   +  DDI+ +++LLGL ++ +       
Sbjct: 59  SEPPLPFLS--PSLQSSPKTSHFYPKIIKESKTNDIDDIQHLIQLLGLSDIRERNRRHQE 116

Query: 111 EEGKNETMNVNNG------C-GSFYSKIVGVKGPKSEKEMERLD 1
           E+  NE + V  G      C G F+ KIVGVKGPK EKE+ERL+
Sbjct: 117 EDDVNERVCVGGGGGECCGCEGGFFEKIVGVKGPKCEKEVERLE 160


>emb|CAN78668.1| hypothetical protein VITISV_031288 [Vitis vinifera]
          Length = 224

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
 Frame = -2

Query: 270 SNPPQEFLSHSPDF-----NAPPSNISKHDQNIDEETEHSKDDIEQVLELLGLLEMNKEE 106
           S  P+ FLS SPDF     ++ PSN        +   +   DDI+ +++LLGL E  +EE
Sbjct: 60  SETPRAFLSDSPDFLPAHEDSSPSNGPYLPVPANGVEDDXVDDIQLLIQLLGLSEWIQEE 119

Query: 105 GKNETMNVNNGCGS--------FYSKIVGVKGPKSEKEMERLD 1
            K+  + + +G           FYS+IVGVKGPK  KE+ERL+
Sbjct: 120 QKSVGLGLRSGDDGGFCCCEVGFYSRIVGVKGPKCGKEVERLE 162


>ref|XP_002521341.1| conserved hypothetical protein [Ricinus communis]
           gi|223539419|gb|EEF41009.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 221

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
 Frame = -2

Query: 270 SNPPQEFLSHSPDFNAPPSNISKHDQNIDEETEHSKDDIEQVLELLGLLEMNKEEGKNET 91
           S  P  FLS SP    P     +  ++I E+     DDI+ ++++LGL ++ K   K + 
Sbjct: 77  SEAPLAFLSSSPSQFLPNPPEEEQSRSIHED---GVDDIQLLMQVLGLSDIRKRN-KGQQ 132

Query: 90  MNVNNGC---GSFYSKIVGVKGPKSEKEMERLD 1
           +  N  C   G FY KIVGVKGPK + EM+RL+
Sbjct: 133 VEGNECCECEGGFYEKIVGVKGPKCKIEMDRLE 165


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