BLASTX nr result
ID: Coptis21_contig00017520
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00017520 (320 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004172685.1| PREDICTED: kinesin-1-like [Cucumis sativus] 72 8e-12 gb|ABR67411.1| kinesin [Cucumis melo subsp. melo] 72 8e-12 ref|XP_004139357.1| PREDICTED: kinesin-1-like [Cucumis sativus] 72 8e-12 ref|XP_002512378.1| Kinesin-3, putative [Ricinus communis] gi|22... 67 5e-11 ref|XP_003591111.1| Kinesin [Medicago truncatula] gi|355480159|g... 68 2e-10 >ref|XP_004172685.1| PREDICTED: kinesin-1-like [Cucumis sativus] Length = 794 Score = 71.6 bits (174), Expect(2) = 8e-12 Identities = 34/46 (73%), Positives = 40/46 (86%) Frame = +3 Query: 117 TVWVLGTEHETLKKK*VKECLERKRLFNEEIELKGNIRVFCRCRPL 254 T+ +LGTE+E LKKK ++E ERKRL+NE IELKGNIRVFCRCRPL Sbjct: 105 TLHLLGTENERLKKKYLEESTERKRLYNEVIELKGNIRVFCRCRPL 150 Score = 23.1 bits (48), Expect(2) = 8e-12 Identities = 9/19 (47%), Positives = 13/19 (68%) Frame = +1 Query: 241 DVGHYNELHIVSGDSSRKL 297 D NE+ ++S DSS+KL Sbjct: 166 DSSQENEIQVLSSDSSKKL 184 >gb|ABR67411.1| kinesin [Cucumis melo subsp. melo] Length = 791 Score = 71.6 bits (174), Expect(2) = 8e-12 Identities = 34/46 (73%), Positives = 40/46 (86%) Frame = +3 Query: 117 TVWVLGTEHETLKKK*VKECLERKRLFNEEIELKGNIRVFCRCRPL 254 T+ +LGTE+E LKKK ++E ERKRL+NE IELKGNIRVFCRCRPL Sbjct: 105 TLHLLGTENERLKKKYLEESTERKRLYNEVIELKGNIRVFCRCRPL 150 Score = 23.1 bits (48), Expect(2) = 8e-12 Identities = 9/19 (47%), Positives = 13/19 (68%) Frame = +1 Query: 241 DVGHYNELHIVSGDSSRKL 297 D NE+ ++S DSS+KL Sbjct: 166 DSSQENEIQVLSSDSSKKL 184 >ref|XP_004139357.1| PREDICTED: kinesin-1-like [Cucumis sativus] Length = 789 Score = 71.6 bits (174), Expect(2) = 8e-12 Identities = 34/46 (73%), Positives = 40/46 (86%) Frame = +3 Query: 117 TVWVLGTEHETLKKK*VKECLERKRLFNEEIELKGNIRVFCRCRPL 254 T+ +LGTE+E LKKK ++E ERKRL+NE IELKGNIRVFCRCRPL Sbjct: 105 TLHLLGTENERLKKKYLEESTERKRLYNEVIELKGNIRVFCRCRPL 150 Score = 23.1 bits (48), Expect(2) = 8e-12 Identities = 9/19 (47%), Positives = 13/19 (68%) Frame = +1 Query: 241 DVGHYNELHIVSGDSSRKL 297 D NE+ ++S DSS+KL Sbjct: 166 DSSQENEIQVLSSDSSKKL 184 >ref|XP_002512378.1| Kinesin-3, putative [Ricinus communis] gi|223548339|gb|EEF49830.1| Kinesin-3, putative [Ricinus communis] Length = 786 Score = 67.4 bits (163), Expect(2) = 5e-11 Identities = 32/46 (69%), Positives = 38/46 (82%) Frame = +3 Query: 117 TVWVLGTEHETLKKK*VKECLERKRLFNEEIELKGNIRVFCRCRPL 254 T+ +L EHE LKKK ++E ERKRL+NE IELKGNIRVFCRCRP+ Sbjct: 102 TLRLLCNEHELLKKKYLEESSERKRLYNEVIELKGNIRVFCRCRPI 147 Score = 24.6 bits (52), Expect(2) = 5e-11 Identities = 10/13 (76%), Positives = 11/13 (84%) Frame = +1 Query: 256 NELHIVSGDSSRK 294 NELHI S D+SRK Sbjct: 168 NELHITSSDASRK 180 >ref|XP_003591111.1| Kinesin [Medicago truncatula] gi|355480159|gb|AES61362.1| Kinesin [Medicago truncatula] Length = 778 Score = 67.8 bits (164), Expect(2) = 2e-10 Identities = 35/63 (55%), Positives = 47/63 (74%) Frame = +3 Query: 66 IKDEMQENTSLEKNDDGTVWVLGTEHETLKKK*VKECLERKRLFNEEIELKGNIRVFCRC 245 +K + TSLE + ++ +LG+E+E LK+K + E ER+RL+NE IELKGNIRVFCRC Sbjct: 97 VKTATESFTSLEVLN--SIQLLGSEYELLKRKYLDESSERRRLYNEIIELKGNIRVFCRC 154 Query: 246 RPL 254 RPL Sbjct: 155 RPL 157 Score = 22.3 bits (46), Expect(2) = 2e-10 Identities = 8/13 (61%), Positives = 11/13 (84%) Frame = +1 Query: 256 NELHIVSGDSSRK 294 NEL ++S DSS+K Sbjct: 178 NELQVISSDSSKK 190