BLASTX nr result

ID: Coptis21_contig00017520 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017520
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004172685.1| PREDICTED: kinesin-1-like [Cucumis sativus]        72   8e-12
gb|ABR67411.1| kinesin [Cucumis melo subsp. melo]                      72   8e-12
ref|XP_004139357.1| PREDICTED: kinesin-1-like [Cucumis sativus]        72   8e-12
ref|XP_002512378.1| Kinesin-3, putative [Ricinus communis] gi|22...    67   5e-11
ref|XP_003591111.1| Kinesin [Medicago truncatula] gi|355480159|g...    68   2e-10

>ref|XP_004172685.1| PREDICTED: kinesin-1-like [Cucumis sativus]
          Length = 794

 Score = 71.6 bits (174), Expect(2) = 8e-12
 Identities = 34/46 (73%), Positives = 40/46 (86%)
 Frame = +3

Query: 117 TVWVLGTEHETLKKK*VKECLERKRLFNEEIELKGNIRVFCRCRPL 254
           T+ +LGTE+E LKKK ++E  ERKRL+NE IELKGNIRVFCRCRPL
Sbjct: 105 TLHLLGTENERLKKKYLEESTERKRLYNEVIELKGNIRVFCRCRPL 150



 Score = 23.1 bits (48), Expect(2) = 8e-12
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 241 DVGHYNELHIVSGDSSRKL 297
           D    NE+ ++S DSS+KL
Sbjct: 166 DSSQENEIQVLSSDSSKKL 184


>gb|ABR67411.1| kinesin [Cucumis melo subsp. melo]
          Length = 791

 Score = 71.6 bits (174), Expect(2) = 8e-12
 Identities = 34/46 (73%), Positives = 40/46 (86%)
 Frame = +3

Query: 117 TVWVLGTEHETLKKK*VKECLERKRLFNEEIELKGNIRVFCRCRPL 254
           T+ +LGTE+E LKKK ++E  ERKRL+NE IELKGNIRVFCRCRPL
Sbjct: 105 TLHLLGTENERLKKKYLEESTERKRLYNEVIELKGNIRVFCRCRPL 150



 Score = 23.1 bits (48), Expect(2) = 8e-12
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 241 DVGHYNELHIVSGDSSRKL 297
           D    NE+ ++S DSS+KL
Sbjct: 166 DSSQENEIQVLSSDSSKKL 184


>ref|XP_004139357.1| PREDICTED: kinesin-1-like [Cucumis sativus]
          Length = 789

 Score = 71.6 bits (174), Expect(2) = 8e-12
 Identities = 34/46 (73%), Positives = 40/46 (86%)
 Frame = +3

Query: 117 TVWVLGTEHETLKKK*VKECLERKRLFNEEIELKGNIRVFCRCRPL 254
           T+ +LGTE+E LKKK ++E  ERKRL+NE IELKGNIRVFCRCRPL
Sbjct: 105 TLHLLGTENERLKKKYLEESTERKRLYNEVIELKGNIRVFCRCRPL 150



 Score = 23.1 bits (48), Expect(2) = 8e-12
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 241 DVGHYNELHIVSGDSSRKL 297
           D    NE+ ++S DSS+KL
Sbjct: 166 DSSQENEIQVLSSDSSKKL 184


>ref|XP_002512378.1| Kinesin-3, putative [Ricinus communis] gi|223548339|gb|EEF49830.1|
           Kinesin-3, putative [Ricinus communis]
          Length = 786

 Score = 67.4 bits (163), Expect(2) = 5e-11
 Identities = 32/46 (69%), Positives = 38/46 (82%)
 Frame = +3

Query: 117 TVWVLGTEHETLKKK*VKECLERKRLFNEEIELKGNIRVFCRCRPL 254
           T+ +L  EHE LKKK ++E  ERKRL+NE IELKGNIRVFCRCRP+
Sbjct: 102 TLRLLCNEHELLKKKYLEESSERKRLYNEVIELKGNIRVFCRCRPI 147



 Score = 24.6 bits (52), Expect(2) = 5e-11
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +1

Query: 256 NELHIVSGDSSRK 294
           NELHI S D+SRK
Sbjct: 168 NELHITSSDASRK 180


>ref|XP_003591111.1| Kinesin [Medicago truncatula] gi|355480159|gb|AES61362.1| Kinesin
           [Medicago truncatula]
          Length = 778

 Score = 67.8 bits (164), Expect(2) = 2e-10
 Identities = 35/63 (55%), Positives = 47/63 (74%)
 Frame = +3

Query: 66  IKDEMQENTSLEKNDDGTVWVLGTEHETLKKK*VKECLERKRLFNEEIELKGNIRVFCRC 245
           +K   +  TSLE  +  ++ +LG+E+E LK+K + E  ER+RL+NE IELKGNIRVFCRC
Sbjct: 97  VKTATESFTSLEVLN--SIQLLGSEYELLKRKYLDESSERRRLYNEIIELKGNIRVFCRC 154

Query: 246 RPL 254
           RPL
Sbjct: 155 RPL 157



 Score = 22.3 bits (46), Expect(2) = 2e-10
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 256 NELHIVSGDSSRK 294
           NEL ++S DSS+K
Sbjct: 178 NELQVISSDSSKK 190


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