BLASTX nr result

ID: Coptis21_contig00017499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017499
         (972 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD38145.1|AF139498_1 porin [Prunus armeniaca]                     218   2e-54
ref|XP_002276636.1| PREDICTED: mitochondrial outer membrane prot...   210   4e-52
ref|XP_004146750.1| PREDICTED: mitochondrial outer membrane prot...   210   5e-52
ref|XP_002312708.1| porin/voltage-dependent anion-selective chan...   210   5e-52
ref|XP_002312786.1| porin/voltage-dependent anion-selective chan...   207   3e-51

>gb|AAD38145.1|AF139498_1 porin [Prunus armeniaca]
          Length = 276

 Score =  218 bits (555), Expect = 2e-54
 Identities = 130/275 (47%), Positives = 174/275 (63%), Gaps = 8/275 (2%)
 Frame = -2

Query: 839 GLYADNDIEIRDMFCKVSSGGLKFTLGRHTSIGTILQ--GIRHSGDTYLADVKTQLK--- 675
           GLY D   + RD+  K      KFT+  +TS G  +   GIR  GD YL DV TQLK   
Sbjct: 6   GLYLDIGKKARDLLYKDYQSDHKFTVTTYTSTGVAISSTGIR-KGDLYLGDVSTQLKNKN 64

Query: 674 --CEISDNIHSRIFATM-ISEPIPGMKTIFNFIIPDCNFGKVELQYQNMFVGISSSLRLT 504
              ++  +  S +  T+ I EP PG+K IF+FI+PD   GKVELQYQ+ + GIS+S+ LT
Sbjct: 65  ITTDVKVDTDSNLRTTITIDEPAPGLKAIFSFIVPDQRSGKVELQYQHEYAGISTSIGLT 124

Query: 503 TMPVVDFSCMLGRDDLSIGTNVSFNPATRKLTECKYGLRSSMPGYIFSCSLNTKNDIVTG 324
             P+V+FS ++G + LS+GT++SF+ A+   T+C  GL  +    I S  LN K D VT 
Sbjct: 125 ANPIVNFSGVVGNNLLSLGTDLSFDTASGNFTKCNAGLNFTHTDLIASLILNDKADTVTA 184

Query: 323 SLYHLVRSSTCTALGYQFTSNISTFQSKLTVGIQHAMDPLTKVKGCVDNFGTVSATVQKC 144
           S YH V   T TA+G + + + S+ ++ LT+G QHA+DPLT VKG V+N+G  SA +Q  
Sbjct: 185 SYYHTVSPLTNTAVGAELSHSFSSNENSLTIGTQHALDPLTTVKGRVNNYGRASALIQH- 243

Query: 143 EWDLWPKSFFTISGEVNVLSILKSAKIGLSLAFYP 39
           EW   PKSFFTISGEV+  +I KSAKIGL+LA  P
Sbjct: 244 EWR--PKSFFTISGEVDTRAIEKSAKIGLALALKP 276


>ref|XP_002276636.1| PREDICTED: mitochondrial outer membrane protein porin of 36 kDa
           isoform 1 [Vitis vinifera]
          Length = 276

 Score =  210 bits (535), Expect = 4e-52
 Identities = 124/274 (45%), Positives = 171/274 (62%), Gaps = 7/274 (2%)
 Frame = -2

Query: 839 GLYADNDIEIRDMFCKVSSGGLKFTLGRHTSIGT-ILQGIRHSGDTYLADVKTQLK---- 675
           GLY+D     RD+  +      KFT+  +TS G  I       G+ ++ADV TQLK    
Sbjct: 6   GLYSDIGKIARDLLYRDYQSDHKFTVTTYTSSGVAITSSGTKKGELFIADVNTQLKNKNI 65

Query: 674 -CEISDNIHSRIFATM-ISEPIPGMKTIFNFIIPDCNFGKVELQYQNMFVGISSSLRLTT 501
             ++  + +S +F T+ + EP PG+KTIF+FIIPD   GKVELQY + + GIS+S+ LT 
Sbjct: 66  TTDVKVDTNSNLFTTITVDEPAPGLKTIFSFIIPDQRSGKVELQYLHEYAGISTSIGLTA 125

Query: 500 MPVVDFSCMLGRDDLSIGTNVSFNPATRKLTECKYGLRSSMPGYIFSCSLNTKNDIVTGS 321
            P+V+FS ++G + LS+GT++SF+ AT   T+C  GL  S    I + +LN K D +  S
Sbjct: 126 NPIVNFSGVVGNNTLSLGTDLSFDTATGNFTKCNAGLGFSNADLIAALTLNDKGDTLNAS 185

Query: 320 LYHLVRSSTCTALGYQFTSNISTFQSKLTVGIQHAMDPLTKVKGCVDNFGTVSATVQKCE 141
            YH V   T TA+G + +   ST ++ LT+G QHA+DPLTKVK   +N G VSA +Q  E
Sbjct: 186 YYHTVSPLTNTAVGAELSHCFSTNENTLTIGTQHALDPLTKVKARANNSGKVSALIQH-E 244

Query: 140 WDLWPKSFFTISGEVNVLSILKSAKIGLSLAFYP 39
           W   PKS FTISGEV+  ++ KSAKIGL+LA  P
Sbjct: 245 WR--PKSLFTISGEVDARAVEKSAKIGLALALKP 276


>ref|XP_004146750.1| PREDICTED: mitochondrial outer membrane protein porin of 36
           kDa-like [Cucumis sativus]
           gi|449505663|ref|XP_004162535.1| PREDICTED:
           mitochondrial outer membrane protein porin of 36
           kDa-like [Cucumis sativus]
          Length = 276

 Score =  210 bits (534), Expect = 5e-52
 Identities = 122/275 (44%), Positives = 175/275 (63%), Gaps = 8/275 (2%)
 Frame = -2

Query: 839 GLYADNDIEIRDMFCKVSSGGLKFTLGRHTSIGTILQ--GIRHSGDTYLADVKTQLK--- 675
           GLY+D   + RD+  K      KFT+  +TS G  +   GI+  G+ +LADV TQLK   
Sbjct: 6   GLYSDIGKKARDLLYKDYQSDHKFTVTTYTSGGVAISSTGIK-KGEIFLADVSTQLKNNN 64

Query: 674 --CEISDNIHSRIFATM-ISEPIPGMKTIFNFIIPDCNFGKVELQYQNMFVGISSSLRLT 504
              ++  + HS +  T+ I EP PG+KTIF+F +PD   GKVELQYQ+ + GIS+ + LT
Sbjct: 65  ITTDVKVDTHSNVHTTVTIDEPAPGLKTIFSFRVPDQRSGKVELQYQHEYAGISTGIGLT 124

Query: 503 TMPVVDFSCMLGRDDLSIGTNVSFNPATRKLTECKYGLRSSMPGYIFSCSLNTKNDIVTG 324
             P+V+F+ ++G D LS+GT++SF+ A+  +T+   GL  +    I + +LN K D +T 
Sbjct: 125 ASPIVNFAGVIGNDKLSLGTDLSFDTASGNITKLNAGLSYTHSDLIAALTLNDKGDALTA 184

Query: 323 SLYHLVRSSTCTALGYQFTSNISTFQSKLTVGIQHAMDPLTKVKGCVDNFGTVSATVQKC 144
           S YHLV   + TA+G + + + S+ ++ LT+G QHA+DPLT VK  V+N+G  SA +Q  
Sbjct: 185 SYYHLVSPLSNTAVGAELSHSFSSNENTLTIGTQHALDPLTSVKARVNNYGRASALIQH- 243

Query: 143 EWDLWPKSFFTISGEVNVLSILKSAKIGLSLAFYP 39
           EW   PKS FTISGEV+  +I KSAKIGL+L   P
Sbjct: 244 EWR--PKSLFTISGEVDTRAIDKSAKIGLALVLKP 276


>ref|XP_002312708.1| porin/voltage-dependent anion-selective channel protein [Populus
           trichocarpa] gi|118484777|gb|ABK94257.1| unknown
           [Populus trichocarpa] gi|222852528|gb|EEE90075.1|
           porin/voltage-dependent anion-selective channel protein
           [Populus trichocarpa]
          Length = 276

 Score =  210 bits (534), Expect = 5e-52
 Identities = 126/275 (45%), Positives = 174/275 (63%), Gaps = 8/275 (2%)
 Frame = -2

Query: 839 GLYADNDIEIRDMFCKVSSGGLKFTLGRHTSIGTILQ--GIRHSGDTYLADVKTQLK--- 675
           GLY D   + RD+  K      KFT+  +TS G  L   GI+  G+ +LADV  QLK   
Sbjct: 6   GLYVDIGKKARDLLYKDYQSDHKFTVTTYTSTGVALTSTGIK-KGELFLADVSGQLKNKN 64

Query: 674 --CEISDNIHSRIFATM-ISEPIPGMKTIFNFIIPDCNFGKVELQYQNMFVGISSSLRLT 504
              +I  + +S +  T+ I EP PG+KTIF+F +PD   GKVELQYQ+ + GIS+SL LT
Sbjct: 65  ITTDIKVDTNSNLLTTITIDEPAPGLKTIFSFKVPDQRSGKVELQYQHEYAGISTSLGLT 124

Query: 503 TMPVVDFSCMLGRDDLSIGTNVSFNPATRKLTECKYGLRSSMPGYIFSCSLNTKNDIVTG 324
             P+V+FS ++G + +S+GT++SF+ AT   T+   GL  +    I S ++N K D +T 
Sbjct: 125 ANPIVNFSGVIGSNVVSLGTDLSFDTATGNFTKYNAGLSYTNADLIASLTVNDKGDTLTA 184

Query: 323 SLYHLVRSSTCTALGYQFTSNISTFQSKLTVGIQHAMDPLTKVKGCVDNFGTVSATVQKC 144
           S YH VR  T TA+G + T + S+ ++ LT+G QHA+DPLT VK  ++N+G  SA +Q  
Sbjct: 185 SYYHTVRPLTSTAVGAELTRSFSSNENTLTIGTQHALDPLTTVKARLNNYGKASALIQH- 243

Query: 143 EWDLWPKSFFTISGEVNVLSILKSAKIGLSLAFYP 39
           EW   PKS FTISGEV+  +I KSAKIGL+LA  P
Sbjct: 244 EWR--PKSLFTISGEVDTKAIEKSAKIGLALALKP 276


>ref|XP_002312786.1| porin/voltage-dependent anion-selective channel protein [Populus
           trichocarpa] gi|118481103|gb|ABK92505.1| unknown
           [Populus trichocarpa] gi|222852606|gb|EEE90153.1|
           porin/voltage-dependent anion-selective channel protein
           [Populus trichocarpa]
          Length = 276

 Score =  207 bits (527), Expect = 3e-51
 Identities = 120/275 (43%), Positives = 176/275 (64%), Gaps = 8/275 (2%)
 Frame = -2

Query: 839 GLYADNDIEIRDMFCKVSSGGLKFTLGRHTSIGTILQ--GIRHSGDTYLADVKTQLK--- 675
           GLY D   + RD+  K      KFT+  +TS G  +   GI+  G+ +LAD+ +QLK   
Sbjct: 6   GLYFDIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSTGIK-KGELFLADISSQLKNKN 64

Query: 674 --CEISDNIHSRIFATM-ISEPIPGMKTIFNFIIPDCNFGKVELQYQNMFVGISSSLRLT 504
              ++  + +S +  T+ I EP PG+KTIF+F +PD   GKVELQYQ+ + GIS+SL LT
Sbjct: 65  ITTDVKVDTNSNLLTTITIDEPAPGLKTIFSFKVPDQRSGKVELQYQHEYAGISTSLGLT 124

Query: 503 TMPVVDFSCMLGRDDLSIGTNVSFNPATRKLTECKYGLRSSMPGYIFSCSLNTKNDIVTG 324
             P+V+FS ++G + +++GT++SF+ AT   T+C  GL  +    I S ++N K D ++ 
Sbjct: 125 ANPIVNFSGVVGSNVVALGTDLSFDTATGNFTKCNAGLSYTNSDLIASLTVNDKGDTLSA 184

Query: 323 SLYHLVRSSTCTALGYQFTSNISTFQSKLTVGIQHAMDPLTKVKGCVDNFGTVSATVQKC 144
           S YH V   T TA+G + T + S+ ++ LT+G QHA+DPLT VK  ++N+G VSA +Q  
Sbjct: 185 SYYHTVSPLTSTAVGAELTHSFSSNENILTIGTQHALDPLTTVKARLNNYGKVSALIQN- 243

Query: 143 EWDLWPKSFFTISGEVNVLSILKSAKIGLSLAFYP 39
           EW   PKS FTISGEV+  +I KSAK+GL+L+  P
Sbjct: 244 EWR--PKSLFTISGEVDTKAIEKSAKVGLALSLKP 276


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