BLASTX nr result

ID: Coptis21_contig00017475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017475
         (988 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265343.1| PREDICTED: uncharacterized protein LOC100245...   355   9e-96
ref|XP_004144551.1| PREDICTED: transmembrane emp24 domain-contai...   349   7e-94
gb|AFK47679.1| unknown [Lotus japonicus]                              348   1e-93
ref|XP_003618034.1| Transmembrane emp24 domain-containing protei...   347   2e-93
ref|XP_003618033.1| Transmembrane emp24 domain-containing protei...   347   2e-93

>ref|XP_002265343.1| PREDICTED: uncharacterized protein LOC100245903 isoform 2 [Vitis
           vinifera] gi|225447506|ref|XP_002265305.1| PREDICTED:
           uncharacterized protein LOC100245903 isoform 1 [Vitis
           vinifera] gi|296085048|emb|CBI28463.3| unnamed protein
           product [Vitis vinifera]
          Length = 214

 Score =  355 bits (911), Expect = 9e-96
 Identities = 167/202 (82%), Positives = 184/202 (91%)
 Frame = -2

Query: 903 LVVLAYFFSLQYVSGIRFVIDREECFSHSVESEGDTVHVSFVVIKADAPWHYSEDGVDLI 724
           +VV+     LQ V GIRFV+DRE+CFSH V+ EGDTVHVSFVVIKADA WHY+EDGVDL+
Sbjct: 13  IVVMLLLSDLQGVVGIRFVVDREDCFSHDVQYEGDTVHVSFVVIKADASWHYAEDGVDLV 72

Query: 723 VKGPSGDQIHDSRDKTSEKFEFVVHRKGLHQFCFTNKSPYHETIDFDVHVGHFTYFDQHA 544
           +KGPSGDQIHD RDKTSEKFEFV  +KGLH+FCFTNKSPY ETIDFDVHVGHFTY+DQHA
Sbjct: 73  IKGPSGDQIHDFRDKTSEKFEFVAQKKGLHRFCFTNKSPYQETIDFDVHVGHFTYYDQHA 132

Query: 543 KDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQTVVNEGMSKRAIHKAMFESAALIG 364
           KDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQ +VNEGMS+RA+HKAMFES AL+G
Sbjct: 133 KDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQAIVNEGMSQRAVHKAMFESVALVG 192

Query: 363 ASVLQVYLLKRLFERKLSTSRV 298
           ASVLQ+YLL+RLFERKL  SRV
Sbjct: 193 ASVLQIYLLQRLFERKLGISRV 214


>ref|XP_004144551.1| PREDICTED: transmembrane emp24 domain-containing protein
           p24beta2-like [Cucumis sativus]
          Length = 214

 Score =  349 bits (895), Expect = 7e-94
 Identities = 164/214 (76%), Positives = 188/214 (87%), Gaps = 2/214 (0%)
 Frame = -2

Query: 933 MELRSYKYVILVVLA--YFFSLQYVSGIRFVIDREECFSHSVESEGDTVHVSFVVIKADA 760
           ME  + ++V+++        SL+   GIRFVIDREECFSH V+ EGDTVHVSFVVIKAD+
Sbjct: 1   MERWAMRFVMMMAFVGVLLLSLRKSEGIRFVIDREECFSHHVQYEGDTVHVSFVVIKADS 60

Query: 759 PWHYSEDGVDLIVKGPSGDQIHDSRDKTSEKFEFVVHRKGLHQFCFTNKSPYHETIDFDV 580
           PWHY +DGVDL++KGPSG+ +HD RDKTSEK EF+ H KGLH+FCFTNKSPYHETIDFDV
Sbjct: 61  PWHYGDDGVDLVIKGPSGEHLHDFRDKTSEKHEFIAHNKGLHRFCFTNKSPYHETIDFDV 120

Query: 579 HVGHFTYFDQHAKDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQTVVNEGMSKRAI 400
           HVGHF+Y +QHAKDEHFNPL++QI+KLEEALYNIQFEQHWLEAQTDRQ +VNEGM KRAI
Sbjct: 121 HVGHFSYHEQHAKDEHFNPLMDQISKLEEALYNIQFEQHWLEAQTDRQAIVNEGMGKRAI 180

Query: 399 HKAMFESAALIGASVLQVYLLKRLFERKLSTSRV 298
           HKAMFESAAL+GASVLQVYLL+RLFERKL TSRV
Sbjct: 181 HKAMFESAALVGASVLQVYLLQRLFERKLGTSRV 214


>gb|AFK47679.1| unknown [Lotus japonicus]
          Length = 212

 Score =  348 bits (892), Expect = 1e-93
 Identities = 161/212 (75%), Positives = 188/212 (88%)
 Frame = -2

Query: 933 MELRSYKYVILVVLAYFFSLQYVSGIRFVIDREECFSHSVESEGDTVHVSFVVIKADAPW 754
           M L     ++  ++  F++L+   GIRFVIDR+ECFSH V+ EGDTVH+SFVVIKAD+PW
Sbjct: 1   MGLSLIHVLLFALIGVFWNLKASEGIRFVIDRDECFSHDVKYEGDTVHISFVVIKADSPW 60

Query: 753 HYSEDGVDLIVKGPSGDQIHDSRDKTSEKFEFVVHRKGLHQFCFTNKSPYHETIDFDVHV 574
           HY ++GVDL+VKGP+G+QIHD RDKTSEKFEFV H+ G+H+FCFTNKSPYHETIDFDVHV
Sbjct: 61  HYGDEGVDLVVKGPAGEQIHDFRDKTSEKFEFVAHKSGVHKFCFTNKSPYHETIDFDVHV 120

Query: 573 GHFTYFDQHAKDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQTVVNEGMSKRAIHK 394
           GHF+Y++QHAKDEHF PLLEQIAKLEEALYNIQFEQHWLEAQTDRQ +VN+ MS+RAIHK
Sbjct: 121 GHFSYYEQHAKDEHFTPLLEQIAKLEEALYNIQFEQHWLEAQTDRQAIVNDAMSRRAIHK 180

Query: 393 AMFESAALIGASVLQVYLLKRLFERKLSTSRV 298
           A+FESAALIGAS LQVYLL+RLFERKL TSRV
Sbjct: 181 ALFESAALIGASALQVYLLQRLFERKLGTSRV 212


>ref|XP_003618034.1| Transmembrane emp24 domain-containing protein [Medicago truncatula]
           gi|355519369|gb|AET00993.1| Transmembrane emp24
           domain-containing protein [Medicago truncatula]
          Length = 213

 Score =  347 bits (891), Expect = 2e-93
 Identities = 161/213 (75%), Positives = 189/213 (88%)
 Frame = -2

Query: 936 LMELRSYKYVILVVLAYFFSLQYVSGIRFVIDREECFSHSVESEGDTVHVSFVVIKADAP 757
           +M   S   +++V++    + +   GIRFVIDR+ECFSH V+ EGDTVHVSFVVIKAD+P
Sbjct: 1   MMMRHSCCVMVIVLIGMLLNWKETEGIRFVIDRDECFSHDVKYEGDTVHVSFVVIKADSP 60

Query: 756 WHYSEDGVDLIVKGPSGDQIHDSRDKTSEKFEFVVHRKGLHQFCFTNKSPYHETIDFDVH 577
           WHY ++GVDL+VKGP+G+QI D RDKTS+KFEFV H+ G+H+FCFTNKSPYHETIDFDVH
Sbjct: 61  WHYGDEGVDLVVKGPAGEQIQDFRDKTSDKFEFVAHKPGVHKFCFTNKSPYHETIDFDVH 120

Query: 576 VGHFTYFDQHAKDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQTVVNEGMSKRAIH 397
           VGHF+YF+QHAKDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQ +VN+GMS+RA+H
Sbjct: 121 VGHFSYFEQHAKDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSRRAVH 180

Query: 396 KAMFESAALIGASVLQVYLLKRLFERKLSTSRV 298
           KA+FESAALIGAS LQVYLL+RLFERKL TSRV
Sbjct: 181 KAIFESAALIGASALQVYLLRRLFERKLGTSRV 213


>ref|XP_003618033.1| Transmembrane emp24 domain-containing protein [Medicago truncatula]
           gi|355519368|gb|AET00992.1| Transmembrane emp24
           domain-containing protein [Medicago truncatula]
           gi|388521389|gb|AFK48756.1| unknown [Medicago
           truncatula]
          Length = 214

 Score =  347 bits (891), Expect = 2e-93
 Identities = 161/213 (75%), Positives = 189/213 (88%)
 Frame = -2

Query: 936 LMELRSYKYVILVVLAYFFSLQYVSGIRFVIDREECFSHSVESEGDTVHVSFVVIKADAP 757
           +M   S   +++V++    + +   GIRFVIDR+ECFSH V+ EGDTVHVSFVVIKAD+P
Sbjct: 2   MMMRHSCCVMVIVLIGMLLNWKETEGIRFVIDRDECFSHDVKYEGDTVHVSFVVIKADSP 61

Query: 756 WHYSEDGVDLIVKGPSGDQIHDSRDKTSEKFEFVVHRKGLHQFCFTNKSPYHETIDFDVH 577
           WHY ++GVDL+VKGP+G+QI D RDKTS+KFEFV H+ G+H+FCFTNKSPYHETIDFDVH
Sbjct: 62  WHYGDEGVDLVVKGPAGEQIQDFRDKTSDKFEFVAHKPGVHKFCFTNKSPYHETIDFDVH 121

Query: 576 VGHFTYFDQHAKDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQTVVNEGMSKRAIH 397
           VGHF+YF+QHAKDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQ +VN+GMS+RA+H
Sbjct: 122 VGHFSYFEQHAKDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSRRAVH 181

Query: 396 KAMFESAALIGASVLQVYLLKRLFERKLSTSRV 298
           KA+FESAALIGAS LQVYLL+RLFERKL TSRV
Sbjct: 182 KAIFESAALIGASALQVYLLRRLFERKLGTSRV 214


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