BLASTX nr result

ID: Coptis21_contig00017452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017452
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525253.1| conserved hypothetical protein [Ricinus comm...    60   2e-07
ref|XP_002304832.1| hypothetical protein POPTRDRAFT_555141 [Popu...    59   3e-07
ref|XP_002297698.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|NP_195115.1| uncharacterized protein [Arabidopsis thaliana] ...    58   7e-07
emb|CBI22475.3| unnamed protein product [Vitis vinifera]               58   9e-07

>ref|XP_002525253.1| conserved hypothetical protein [Ricinus communis]
           gi|223535411|gb|EEF37081.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 354

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/51 (52%), Positives = 39/51 (76%)
 Frame = -2

Query: 155 MPPYRHSSRTDTLELKAQIVSNIGSEKAEKYFNYISRFLSLKLTKFEFNKL 3
           MP  RH SR DTLE+K QI   +G  KA+KYF+ +++FLSLK++K +F++L
Sbjct: 1   MPAARHCSRIDTLEIKLQIERKLGHLKAQKYFDLLTKFLSLKISKCDFDRL 51


>ref|XP_002304832.1| hypothetical protein POPTRDRAFT_555141 [Populus trichocarpa]
           gi|222842264|gb|EEE79811.1| hypothetical protein
           POPTRDRAFT_555141 [Populus trichocarpa]
          Length = 350

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/51 (54%), Positives = 38/51 (74%)
 Frame = -2

Query: 155 MPPYRHSSRTDTLELKAQIVSNIGSEKAEKYFNYISRFLSLKLTKFEFNKL 3
           M P    SR + +ELK QIV  IG+E+++ YF Y+++FLSLKL+K EFNKL
Sbjct: 1   MQPSTQHSRVNLVELKVQIVKRIGAERSKLYFYYLNKFLSLKLSKAEFNKL 51


>ref|XP_002297698.1| predicted protein [Populus trichocarpa] gi|222844956|gb|EEE82503.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/51 (54%), Positives = 37/51 (72%)
 Frame = -2

Query: 155 MPPYRHSSRTDTLELKAQIVSNIGSEKAEKYFNYISRFLSLKLTKFEFNKL 3
           M P    SR +  ELK QIV  IG+++++ YF Y++RFLSLKL+K EFNKL
Sbjct: 1   MQPSSQHSRVNLAELKVQIVKRIGADRSKLYFYYLNRFLSLKLSKVEFNKL 51


>ref|NP_195115.1| uncharacterized protein [Arabidopsis thaliana]
           gi|42573161|ref|NP_974677.1| uncharacterized protein
           [Arabidopsis thaliana] gi|3297813|emb|CAA19871.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|7270338|emb|CAB80106.1| hypothetical protein
           [Arabidopsis thaliana] gi|20260336|gb|AAM13066.1|
           unknown protein [Arabidopsis thaliana]
           gi|30984566|gb|AAP42746.1| At4g33890 [Arabidopsis
           thaliana] gi|332660888|gb|AEE86288.1| uncharacterized
           protein [Arabidopsis thaliana]
           gi|332660889|gb|AEE86289.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 342

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/45 (60%), Positives = 35/45 (77%)
 Frame = -2

Query: 137 SSRTDTLELKAQIVSNIGSEKAEKYFNYISRFLSLKLTKFEFNKL 3
           SSR DTLE+KA I   IG+++AE YFN + RF +LK+TK EF+KL
Sbjct: 7   SSRLDTLEIKALIYREIGNQRAESYFNQLGRFFALKITKSEFDKL 51


>emb|CBI22475.3| unnamed protein product [Vitis vinifera]
          Length = 264

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/50 (58%), Positives = 37/50 (74%)
 Frame = -2

Query: 155 MPPYRHSSRTDTLELKAQIVSNIGSEKAEKYFNYISRFLSLKLTKFEFNK 6
           M P ++ +R DTLELKA IV  IG +KAEKYF+ + R  SLKL+K EF+K
Sbjct: 1   MVPNQNFTRIDTLELKALIVRRIGRQKAEKYFDQLKRLFSLKLSKREFDK 50


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