BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017451
         (2060 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270788.1| PREDICTED: pentatricopeptide repeat-containi...   578   e-162
ref|XP_002524769.1| pentatricopeptide repeat-containing protein,...   548   e-153
ref|XP_004147968.1| PREDICTED: pentatricopeptide repeat-containi...   508   e-141
ref|XP_003520548.1| PREDICTED: pentatricopeptide repeat-containi...   504   e-140
ref|XP_003553441.1| PREDICTED: pentatricopeptide repeat-containi...   488   e-135

>ref|XP_002270788.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30780
            [Vitis vinifera] gi|296086664|emb|CBI32299.3| unnamed
            protein product [Vitis vinifera]
          Length = 494

 Score =  578 bits (1489), Expect = e-162
 Identities = 285/459 (62%), Positives = 357/459 (77%)
 Frame = +1

Query: 175  LINLFTDKETNGRIIHKTNRRIMRRMEGVFLNNKVAQLCDELVSNQFDSKKLFGILEDKA 354
            +I LF+DK +      + + R    + G     KV+QL DELV +  DS  +  +LE+K 
Sbjct: 43   MIGLFSDKHS------ELDLRAREELRG-----KVSQLRDELVPSGDDSDMVVRVLEEKG 91

Query: 355  VSLIRIYSDGAGFVSLLEKLKPWPLLFIEVFNWRREKCEAGLGMVSEEYAKGITIAGRTK 534
             SL R YS+G+ FV LL++L  WP L ++VFNWRR + +  + M SEEYAKGI++AGRTK
Sbjct: 92   ESLFRSYSNGSAFVELLKQLSSWPYLALQVFNWRRNQTDYSIPMTSEEYAKGISVAGRTK 151

Query: 535  NVDLAVILFKEASDKGIKTSSTYNALMGAYMYNGLADKCQLLFRDLKREITCGPTIVTYN 714
            NVDLAV LF EA++K IKT+STYNALMGAYM NG A+KCQ LFRDLKRE +C PTIVTYN
Sbjct: 152  NVDLAVELFTEAANKQIKTTSTYNALMGAYMCNGHAEKCQALFRDLKREASCSPTIVTYN 211

Query: 715  ILLTVFGRLMLVNHMEATFREIENSNLTPNLNTYNHIISGYVTAWMWEDMERVYRTMEEG 894
            IL++VFGRLMLV+HMEATFREI+   L+PN++TYN+II+GYVTAWMW  ME  +RTM+E 
Sbjct: 212  ILISVFGRLMLVDHMEATFREIKELELSPNISTYNNIIAGYVTAWMWNRMEDTFRTMKED 271

Query: 895  PVKPEVSTHLLMLRGYSHSVNLEKMEKTYEIVKDHINENEVPLIRAMISAYCKSSDKDRV 1074
             ++P+++THLLMLRGY+HS NL+KME+TYE++K H+N+ E+PLIRAMI AYCKSS  DRV
Sbjct: 272  NIQPDINTHLLMLRGYAHSGNLQKMEETYELIKGHVNDKEIPLIRAMICAYCKSSITDRV 331

Query: 1075 SKVEALLKFIPEDEYRAWLNVILIKLYAQEDLVDTMENFIGQAFEHNTSVNTVGVMHLII 1254
             K+ AL+K IPE+EYR WLNV+LI++YAQED V+ MEN I +AFEH TSV T+ VM  II
Sbjct: 332  EKIGALMKLIPENEYRPWLNVMLIRVYAQEDWVEEMENSINEAFEHKTSVKTMRVMRSII 391

Query: 1255 ASYFRCDTVERLTSFVKRAESSDWRICRSLYHCKMVMYSSANRLEEMENVLKEMERFNLD 1434
            A+YFRC+ V+RL +FVKRAE   W ICRSLYHCKMVMY+S  RLEEME+VL EME  N  
Sbjct: 392  ATYFRCNAVDRLANFVKRAECGGWHICRSLYHCKMVMYASQKRLEEMESVLNEMESSNFC 451

Query: 1435 PTKRTFLIMYKAYSHWGQRSRVMRLLGTMCKHGFQIPSD 1551
             TK+TF I+YKAYS W QR +V ++ G MCKHG+ IPSD
Sbjct: 452  CTKKTFWILYKAYSMWDQRHKVEQVKGLMCKHGYGIPSD 490


>ref|XP_002524769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223535953|gb|EEF37612.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 509

 Score =  548 bits (1411), Expect = e-153
 Identities = 285/522 (54%), Positives = 372/522 (71%), Gaps = 6/522 (1%)
 Frame = +1

Query: 7    MRRVLKITDASAKAESLRLYQRPIFPR---PNILIXXXXXXXXXXLTKSQTRFFDGYRKL 177
            M+RV KI+D + +AE L L + P   +   P IL           LTKS         KL
Sbjct: 1    MKRVSKISDLAVQAELLSLNKFPSITQTLTPYILT----------LTKSPIY------KL 44

Query: 178  INLFTDKETN--GRIIHKTNRRIMRRMEGVF-LNNKVAQLCDELVSNQFDSKKLFGILED 348
                T +  +    II   +RR     + +  L+  V+ L DELV +  DS K F +LE+
Sbjct: 45   ARAHTSEPVSFFPNIISLFSRRFPVDNKAIEDLSKTVSHLRDELVQHAEDSDKFFRVLEE 104

Query: 349  KAVSLIRIYSDGAGFVSLLEKLKPWPLLFIEVFNWRREKCEAGLGMVSEEYAKGITIAGR 528
            +  SL R+ SD +  V LL +L   P L +EVFNWRR++ E    M  EEYAKGITIAGR
Sbjct: 105  QGDSLFRMRSDRSALVELLRQLVSLPHLAVEVFNWRRKQTEWSTPMTHEEYAKGITIAGR 164

Query: 529  TKNVDLAVILFKEASDKGIKTSSTYNALMGAYMYNGLADKCQLLFRDLKREITCGPTIVT 708
             KNVDLA+ +F EA  K  K +  YNALMGAYMYNG  DKCQ LF D K+E   GP++VT
Sbjct: 165  AKNVDLAIEIFAEACSKRRKKTCIYNALMGAYMYNGHYDKCQSLFLDFKKEANIGPSVVT 224

Query: 709  YNILLTVFGRLMLVNHMEATFREIENSNLTPNLNTYNHIISGYVTAWMWEDMERVYRTME 888
            YNIL++VFGR MLV+HMEATFRE+ N N++PN++TYN++I+GYVTAWMW+DME+V++ M+
Sbjct: 225  YNILISVFGRSMLVDHMEATFRELMNLNISPNVSTYNNLIAGYVTAWMWDDMEQVFQLMK 284

Query: 889  EGPVKPEVSTHLLMLRGYSHSVNLEKMEKTYEIVKDHINENEVPLIRAMISAYCKSSDKD 1068
            EGP+ P + T+LLMLRGY+HS N+EKME+ Y++V+DH+N NEVPLIR MI AYCKSS  D
Sbjct: 285  EGPIYPHLDTYLLMLRGYAHSGNIEKMEEMYKLVQDHVNVNEVPLIRTMICAYCKSSITD 344

Query: 1069 RVSKVEALLKFIPEDEYRAWLNVILIKLYAQEDLVDTMENFIGQAFEHNTSVNTVGVMHL 1248
            R+ K+E LL+ IPE+EYR WLNV+LIK+YAQ++L++ MEN I +AF+H T++ TVG+M  
Sbjct: 345  RIKKIEELLRLIPEEEYRPWLNVLLIKVYAQQNLLEAMENKIDEAFKHETTITTVGIMRT 404

Query: 1249 IIASYFRCDTVERLTSFVKRAESSDWRICRSLYHCKMVMYSSANRLEEMENVLKEMERFN 1428
            IIASYFRC+ V+RL  FVKRAE S WRICRSLYHCKMVMY+S  RL+EME+VL +ME FN
Sbjct: 405  IIASYFRCNAVDRLADFVKRAECSGWRICRSLYHCKMVMYASEKRLDEMESVLNDMENFN 464

Query: 1429 LDPTKRTFLIMYKAYSHWGQRSRVMRLLGTMCKHGFQIPSDA 1554
            L  TK+TF+I+YKAY   G++ +V ++LG M KHG+++P  A
Sbjct: 465  LGRTKKTFVILYKAYLMCGKKYKVEQVLGLMYKHGYEVPEGA 506


>ref|XP_004147968.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30780-like
            [Cucumis sativus] gi|449494249|ref|XP_004159492.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At2g30780-like [Cucumis sativus]
          Length = 514

 Score =  508 bits (1307), Expect = e-141
 Identities = 259/457 (56%), Positives = 334/457 (73%)
 Frame = +1

Query: 175  LINLFTDKETNGRIIHKTNRRIMRRMEGVFLNNKVAQLCDELVSNQFDSKKLFGILEDKA 354
            LI LF++K  +  I+      IM R        KV ++  EL+ N  DS K+  ILED  
Sbjct: 62   LIELFSNKPDDHEILAIC---IMER--------KVLEVSHELILNSEDSNKIVKILEDSK 110

Query: 355  VSLIRIYSDGAGFVSLLEKLKPWPLLFIEVFNWRREKCEAGLGMVSEEYAKGITIAGRTK 534
              L+  ++DG+ FV LL++L   P L +EVFNWRR +      +  EEYAKGI +AG++K
Sbjct: 111  DLLLWKHTDGSAFVELLKQLGSQPNLALEVFNWRRRQ-GGSFPLTVEEYAKGIAVAGKSK 169

Query: 535  NVDLAVILFKEASDKGIKTSSTYNALMGAYMYNGLADKCQLLFRDLKREITCGPTIVTYN 714
            ++DLAV LF EAS+K +K +STYNALMG +M+NGLADKC  +FRDLKR+  C P IVTYN
Sbjct: 170  HIDLAVGLFNEASNKRVKATSTYNALMGVFMFNGLADKCNSVFRDLKRDAGCVPNIVTYN 229

Query: 715  ILLTVFGRLMLVNHMEATFREIENSNLTPNLNTYNHIISGYVTAWMWEDMERVYRTMEEG 894
            IL++VFGRLMLV+HMEAT REI N NL+PN+NTYN +I+GY+TAWMW+ ME+ +  M+  
Sbjct: 230  ILISVFGRLMLVDHMEATMREIHNLNLSPNVNTYNSLIAGYITAWMWKRMEQAFMKMKAS 289

Query: 895  PVKPEVSTHLLMLRGYSHSVNLEKMEKTYEIVKDHINENEVPLIRAMISAYCKSSDKDRV 1074
             + P   T LLMLRGY+HS NLEKME+ +  +KDH+N+N  PLIRAMI AY +SS  D+V
Sbjct: 290  SITPNTETFLLMLRGYAHSDNLEKMEEMHHFLKDHVNKNNFPLIRAMIYAYSRSSITDKV 349

Query: 1075 SKVEALLKFIPEDEYRAWLNVILIKLYAQEDLVDTMENFIGQAFEHNTSVNTVGVMHLII 1254
             K++ALLK IPE+EYR WLNV LI++YAQ D ++ MEN I +AFEH TSV TV VM  II
Sbjct: 350  HKIDALLKLIPEEEYRPWLNVKLIRVYAQADCLERMENSINEAFEHGTSVYTVHVMRSII 409

Query: 1255 ASYFRCDTVERLTSFVKRAESSDWRICRSLYHCKMVMYSSANRLEEMENVLKEMERFNLD 1434
            ASYFRC+ V++L +F+ RAESS WRICRSLYHCKMVM++S NRLEEME VL EM+ FNLD
Sbjct: 410  ASYFRCNAVDKLINFISRAESSGWRICRSLYHCKMVMFASQNRLEEMECVLDEMKNFNLD 469

Query: 1435 PTKRTFLIMYKAYSHWGQRSRVMRLLGTMCKHGFQIP 1545
             +K+TF I+YKAYS  G R +  +++  MCK G+ +P
Sbjct: 470  WSKKTFYILYKAYSTSGCRYKANQVVCRMCKLGYGVP 506


>ref|XP_003520548.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30780-like
            [Glycine max]
          Length = 442

 Score =  504 bits (1299), Expect = e-140
 Identities = 247/437 (56%), Positives = 326/437 (74%)
 Frame = +1

Query: 247  RMEGVFLNNKVAQLCDELVSNQFDSKKLFGILEDKAVSLIRIYSDGAGFVSLLEKLKPWP 426
            R+ G+ L NKV  L +EL+ +  DS ++  IL+D   +L R + +G+  + L+ +L   P
Sbjct: 5    RLIGLDLINKVTILKNELIRDSCDSARVQTILDDSFDTLFRRHPNGSALLKLMNQLNSNP 64

Query: 427  LLFIEVFNWRREKCEAGLGMVSEEYAKGITIAGRTKNVDLAVILFKEASDKGIKTSSTYN 606
             L ++VF+WRR++  A   M + EY+KGI  AGR+ NVDLAV LFKEA+ KGIKT+ TYN
Sbjct: 65   SLALQVFSWRRKRSNAENPMDAYEYSKGIKAAGRSGNVDLAVKLFKEAAVKGIKTTGTYN 124

Query: 607  ALMGAYMYNGLADKCQLLFRDLKREITCGPTIVTYNILLTVFGRLMLVNHMEATFREIEN 786
            ALMGA+M+NGL D CQ LF DLKR++TC P+I TYNILL+V+GRLMLV+HMEATF EI+ 
Sbjct: 125  ALMGAFMFNGLPDNCQSLFCDLKRDLTCDPSIATYNILLSVYGRLMLVDHMEATFSEIQR 184

Query: 787  SNLTPNLNTYNHIISGYVTAWMWEDMERVYRTMEEGPVKPEVSTHLLMLRGYSHSVNLEK 966
             NL  N+ TYNH+I+GY+TAWMW+DME+V++ ++   V+P + THLLMLRGY++S NLEK
Sbjct: 185  LNLAMNICTYNHLIAGYITAWMWDDMEKVFQMLKLSSVEPNMKTHLLMLRGYANSGNLEK 244

Query: 967  MEKTYEIVKDHINENEVPLIRAMISAYCKSSDKDRVSKVEALLKFIPEDEYRAWLNVILI 1146
            ME+ Y  ++DH+N  E+ LIR MI AYC+SS  DR+ K+E LLKFIP+ EYR WLNV+LI
Sbjct: 245  MEEMYSFIRDHVNIKEISLIRCMICAYCRSSHADRLKKIELLLKFIPQKEYRPWLNVLLI 304

Query: 1147 KLYAQEDLVDTMENFIGQAFEHNTSVNTVGVMHLIIASYFRCDTVERLTSFVKRAESSDW 1326
            KLYA+ED +  MEN I +AFEH TS+ T G++  IIA+Y+RC+ VE+L +FV+RAE S W
Sbjct: 305  KLYAKEDWLAKMENAINEAFEHGTSITTKGILRRIIATYYRCNAVEKLENFVRRAEISGW 364

Query: 1327 RICRSLYHCKMVMYSSANRLEEMENVLKEMERFNLDPTKRTFLIMYKAYSHWGQRSRVMR 1506
             ICRSLYHCK+VMY S   L EM NVL+EME   L  +K+T  IMYKAY   GQ S V++
Sbjct: 365  SICRSLYHCKLVMYGSQMTLLEMHNVLEEMENVKLKCSKKTLWIMYKAYMSRGQISMVLK 424

Query: 1507 LLGTMCKHGFQIPSDAF 1557
             LG M KHG+++P  AF
Sbjct: 425  TLGQMFKHGYEVPLSAF 441


>ref|XP_003553441.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30780-like
            [Glycine max]
          Length = 504

 Score =  488 bits (1255), Expect = e-135
 Identities = 242/431 (56%), Positives = 319/431 (74%)
 Frame = +1

Query: 265  LNNKVAQLCDELVSNQFDSKKLFGILEDKAVSLIRIYSDGAGFVSLLEKLKPWPLLFIEV 444
            L NK + L +EL+    DS ++  IL+D + +LI+ + DG+  + L+ +L   P L ++V
Sbjct: 74   LINKASILKNELIRESSDSARVLSILDDNSDTLIQRHPDGSVLLRLMNQLNSNPSLALQV 133

Query: 445  FNWRREKCEAGLGMVSEEYAKGITIAGRTKNVDLAVILFKEASDKGIKTSSTYNALMGAY 624
            F+WRR++      M + EY+KGI  AGR+ NVDLAV LFKEA+ KGIKT+STYNALMGA 
Sbjct: 134  FSWRRKRSNVENPMDAYEYSKGIKAAGRSGNVDLAVKLFKEAAVKGIKTTSTYNALMGAC 193

Query: 625  MYNGLADKCQLLFRDLKREITCGPTIVTYNILLTVFGRLMLVNHMEATFREIENSNLTPN 804
            M NGLAD CQ LF DLKR+ TC P+I TYNILL+VFGRLMLV+HMEATFREI+    T N
Sbjct: 194  MSNGLADNCQSLFCDLKRDPTCDPSIATYNILLSVFGRLMLVDHMEATFREIQKLTFTMN 253

Query: 805  LNTYNHIISGYVTAWMWEDMERVYRTMEEGPVKPEVSTHLLMLRGYSHSVNLEKMEKTYE 984
            + TYNH+I+GY+TAWMW+DME V++ ++  PV+P + T++LMLRGY++S NLEKME+ Y 
Sbjct: 254  ICTYNHMIAGYITAWMWDDMENVFQMLKRSPVEPNMKTYMLMLRGYANSGNLEKMEEIYS 313

Query: 985  IVKDHINENEVPLIRAMISAYCKSSDKDRVSKVEALLKFIPEDEYRAWLNVILIKLYAQE 1164
             + D ++  E+ LIR MI AY +SSD DR+ K+E LLKFIP  EYR WLNV+LIKLYA+E
Sbjct: 314  FITDRVDIKEISLIRCMICAYSRSSDADRLKKIELLLKFIPGKEYRPWLNVLLIKLYAKE 373

Query: 1165 DLVDTMENFIGQAFEHNTSVNTVGVMHLIIASYFRCDTVERLTSFVKRAESSDWRICRSL 1344
            D ++ MEN I +AFEH TS+ T G++  I+A+Y+R + VE+L +FV+RAE S W ICRS 
Sbjct: 374  DWLEKMENAINEAFEHGTSITTKGILRCIVATYYRYNAVEKLENFVRRAEISGWSICRSA 433

Query: 1345 YHCKMVMYSSANRLEEMENVLKEMERFNLDPTKRTFLIMYKAYSHWGQRSRVMRLLGTMC 1524
            YHCK+VMY S  +L  M NVL+EME  NL+ TK+T  IMYKAY   GQ S V++ LG M 
Sbjct: 434  YHCKLVMYGS--QLPLMHNVLEEMEMVNLECTKKTLWIMYKAYMRNGQSSMVLKTLGQMF 491

Query: 1525 KHGFQIPSDAF 1557
            KHG+++P  AF
Sbjct: 492  KHGYEVPLSAF 502