BLASTX nr result

ID: Coptis21_contig00017443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017443
         (1097 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525504.1| conserved hypothetical protein [Ricinus comm...   142   1e-31
ref|XP_002325938.1| predicted protein [Populus trichocarpa] gi|2...   131   3e-28
emb|CBI31246.3| unnamed protein product [Vitis vinifera]              130   4e-28
ref|XP_002274203.1| PREDICTED: uncharacterized protein LOC100241...   130   4e-28
ref|XP_002327305.1| predicted protein [Populus trichocarpa] gi|2...   125   1e-26

>ref|XP_002525504.1| conserved hypothetical protein [Ricinus communis]
           gi|223535183|gb|EEF36862.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 325

 Score =  142 bits (358), Expect = 1e-31
 Identities = 108/325 (33%), Positives = 151/325 (46%), Gaps = 72/325 (22%)
 Frame = -3

Query: 960 GELEDWEVLQSPETSFV--------------ISGDSESLVIRSDYF-------------I 862
           GE +DWE+L + +T  V              I  DSE  V+R DYF             +
Sbjct: 7   GEFQDWELLVNSDTDMVHSPNSVNNSRNLEEIEADSEG-VLRLDYFSLENDSRYAKTAAV 65

Query: 861 VDSNSQLMV--------------------------SESGIEEVVSPKVIDFEEKQDLS-- 766
           VD++ +  V                          S+SG +     K  DF+ K +L   
Sbjct: 66  VDASDEGSVESDNPSWIDPGPETRYNQITNSGEFWSDSGSDRSDERKASDFDVKNELGVV 125

Query: 765 ----------------CEDNHSGLVSELFRGNNNELDCENGMKDDVCTIEAIGETQVVE- 637
                           C+D+  G   E F G+ + L+ +N M  +      +G    V+ 
Sbjct: 126 DNVKMEGGFQGIGEIECKDDTEGKF-ESFEGSLSNLEGKNEMGFEESLKNEMGTGDFVDN 184

Query: 636 VHSDNDXXXXXXXXXXXXXEMGNNEIEPRAVDEVNSGGEGKAIVVWYKLPFELLKFCIFR 457
           +  D D                +N      V++ + G E K  VVW+K+PFELL++C+FR
Sbjct: 185 LSMDKDLGESNVENSSKE----DNLSVVAVVEKKSEGDEEKRKVVWWKVPFELLRYCVFR 240

Query: 456 VSPVWTVSVAAALMGLVILKRRLSRMKAKSRSIPIKLTVDDKKVSQFMMRASRLNEAFSX 277
           +SPVWT S+AAA+MG VIL RRL +MK K+RS+P+K+TVDDKKVSQFM RA+RLNEAFS 
Sbjct: 241 ISPVWTFSMAAAVMGFVILGRRLYKMKRKTRSLPLKVTVDDKKVSQFMSRAARLNEAFSV 300

Query: 276 XXXXXXXXXXXPGAGVTPWSMVNLR 202
                      P  GV  W ++ LR
Sbjct: 301 VRRVPIVRPLLPAGGVNSWPVMTLR 325


>ref|XP_002325938.1| predicted protein [Populus trichocarpa] gi|222862813|gb|EEF00320.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  131 bits (329), Expect = 3e-28
 Identities = 64/118 (54%), Positives = 89/118 (75%), Gaps = 2/118 (1%)
 Frame = -3

Query: 549 AVDEVNSGGEG--KAIVVWYKLPFELLKFCIFRVSPVWTVSVAAALMGLVILKRRLSRMK 376
           AV +   G EG  + +VVW+K+PFE+L++C+FR++PVW+VS+AAA+MG VIL RRL +M+
Sbjct: 185 AVRDTKPGDEGEKRKVVVWWKVPFEVLRYCVFRLNPVWSVSMAAAVMGFVILGRRLYKMR 244

Query: 375 AKSRSIPIKLTVDDKKVSQFMMRASRLNEAFSXXXXXXXXXXXXPGAGVTPWSMVNLR 202
            K++S+ +K+TVDDKKVSQFM RA+RLNEAFS            P AGV PW +++LR
Sbjct: 245 RKTKSLQLKVTVDDKKVSQFMTRATRLNEAFSVVRRVPIVRPLLPAAGVNPWPVMSLR 302


>emb|CBI31246.3| unnamed protein product [Vitis vinifera]
          Length = 132

 Score =  130 bits (328), Expect = 4e-28
 Identities = 69/118 (58%), Positives = 85/118 (72%), Gaps = 2/118 (1%)
 Frame = -3

Query: 549 AVDEVNSGG--EGKAIVVWYKLPFELLKFCIFRVSPVWTVSVAAALMGLVILKRRLSRMK 376
           A+ EV S G  E K  VVW+K+P E  ++C FRVSPVW+ SVAAA++G+VIL RRL RMK
Sbjct: 15  AIKEVESKGDKELKRRVVWWKVPLEFFRYCAFRVSPVWSFSVAAAILGIVILGRRLYRMK 74

Query: 375 AKSRSIPIKLTVDDKKVSQFMMRASRLNEAFSXXXXXXXXXXXXPGAGVTPWSMVNLR 202
            KSRS+ +K+TVDDKKVSQFM RA+RLNEAFS            P AGV PW +++LR
Sbjct: 75  RKSRSLQLKVTVDDKKVSQFMSRAARLNEAFSVVRRVPIIRPALPAAGVNPWPVMSLR 132


>ref|XP_002274203.1| PREDICTED: uncharacterized protein LOC100241424 [Vitis vinifera]
          Length = 415

 Score =  130 bits (328), Expect = 4e-28
 Identities = 69/118 (58%), Positives = 85/118 (72%), Gaps = 2/118 (1%)
 Frame = -3

Query: 549 AVDEVNSGG--EGKAIVVWYKLPFELLKFCIFRVSPVWTVSVAAALMGLVILKRRLSRMK 376
           A+ EV S G  E K  VVW+K+P E  ++C FRVSPVW+ SVAAA++G+VIL RRL RMK
Sbjct: 298 AIKEVESKGDKELKRRVVWWKVPLEFFRYCAFRVSPVWSFSVAAAILGIVILGRRLYRMK 357

Query: 375 AKSRSIPIKLTVDDKKVSQFMMRASRLNEAFSXXXXXXXXXXXXPGAGVTPWSMVNLR 202
            KSRS+ +K+TVDDKKVSQFM RA+RLNEAFS            P AGV PW +++LR
Sbjct: 358 RKSRSLQLKVTVDDKKVSQFMSRAARLNEAFSVVRRVPIIRPALPAAGVNPWPVMSLR 415


>ref|XP_002327305.1| predicted protein [Populus trichocarpa] gi|222835675|gb|EEE74110.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score =  125 bits (315), Expect = 1e-26
 Identities = 96/297 (32%), Positives = 150/297 (50%), Gaps = 39/297 (13%)
 Frame = -3

Query: 975 NTVAMGELEDWEVLQSPETSFV---------------ISGDSESLVIRSDYFIVDSNSQ- 844
           +  A+ + +DWE+L + ++  V               I  D+E +  R DYF ++++++ 
Sbjct: 4   DAAAVTDFQDWELLANSDSDLVNSPISVADSSRSFEEIVADTEGM-FRLDYFSLENDNRY 62

Query: 843 ----LMVSESGIEEVVSPKVID------FEEKQDLS---------CEDNHSG---LVSEL 730
               L  ++ G  E  +P  ID      F+ +  +           +D   G   + +EL
Sbjct: 63  VKTTLDATDEGSVESDNPSWIDPGSETRFQRRNSVEFWPDSGSDRSDDRKLGDFDVKNEL 122

Query: 729 FRGNNNELDCENGMKDDVCTIEAIGETQV-VEVHSDNDXXXXXXXXXXXXXEMGNNEIEP 553
               N   D  +    D      +G+ QV  E+  +++              +G    E 
Sbjct: 123 GVVENERTDFWSDSGGDDLFSGDVGKDQVGSEILGESEGENESKDVNLSVVAVG----ET 178

Query: 552 RAVDEVNSGGEGKAIVVWYKLPFELLKFCIFRVSPVWTVSVAAALMGLVILKRRLSRMKA 373
           +  DEV    E + +V+W K+PFE+L++C+FR SPVW+VSVAAA+MG VIL RRL +MK 
Sbjct: 179 KPGDEV----EKRKVVLW-KVPFEMLRYCVFRFSPVWSVSVAAAVMGFVILGRRLYKMKR 233

Query: 372 KSRSIPIKLTVDDKKVSQFMMRASRLNEAFSXXXXXXXXXXXXPGAGVTPWSMVNLR 202
           K++S+ +K+TVDDKKVS FM RA+RLNE FS            P AGV PW +++LR
Sbjct: 234 KTKSLQLKVTVDDKKVSHFMSRAARLNETFSVVRRVPIVRPLLPAAGVNPWPVMSLR 290


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