BLASTX nr result

ID: Coptis21_contig00017439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017439
         (886 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271315.1| PREDICTED: uncharacterized protein LOC100264...   149   8e-34
ref|XP_002325689.1| predicted protein [Populus trichocarpa] gi|2...   138   1e-30
ref|XP_002319928.1| predicted protein [Populus trichocarpa] gi|2...   138   2e-30
gb|ADN33895.1| hypothetical protein [Cucumis melo subsp. melo]        125   1e-26
ref|XP_002517992.1| conserved hypothetical protein [Ricinus comm...   124   4e-26

>ref|XP_002271315.1| PREDICTED: uncharacterized protein LOC100264907 [Vitis vinifera]
          Length = 466

 Score =  149 bits (376), Expect = 8e-34
 Identities = 112/307 (36%), Positives = 158/307 (51%), Gaps = 12/307 (3%)
 Frame = -2

Query: 885 RTDIRRRGLSLGPEQISGGIRSRTKERVGSSISFQSRKNRRKSCFSKLQDIDEEKVAKGR 706
           RT + RRG+SLGP +I  G+R       G S+                     E  A GR
Sbjct: 170 RTKVHRRGVSLGPSEIVAGVRR------GMSLG------------------PSEIAAGGR 205

Query: 705 GISLGLLVNNVNATRKTRVQVENTNIEFAGMSSKKCSFNFKEFNEDKVTKQRG-GRSLSP 529
              LG       +T+  R               K C +  ++ +E KVTK+RG   ++SP
Sbjct: 206 LRHLGKPEVTPISTQSRR---------------KSCFWKLEDIDEGKVTKERGKSMTVSP 250

Query: 528 EPRLPVSMNQALKRGLTSVGLKKLGMKDSGVLSSVQPKKLFKETELSLGSKKAVVRNGKV 349
           + R  +S  QA K+  T++  K+   K+ G +SS+QPKKLF + E S    K  ++NG+V
Sbjct: 251 KNRKIISKTQASKQAATTIASKRPVKKELGFVSSIQPKKLFTDGEKSA---KKPLKNGRV 307

Query: 348 IASRFN--GNQKL----PEQRKRSLPEHNEEDVERCENKCSLITEKSRSYLQDSGLNQVI 187
           +ASR++  GNQ         RKRSLPE NE++ +RC+ + +   EK     Q++G N   
Sbjct: 308 VASRYSLIGNQSTGGCSSSLRKRSLPE-NEDNGKRCDKRRNSSLEKPGGIFQENGENLDK 366

Query: 186 GTRRVKKRWEIPSEVII-----HXXXXXXXXXXXSKMASLLPKIRTNRCTNGSPRDSGPA 22
           G  RVKK+WEIPSEV++                 +KM  +LP IRT+RC N SPR+SGPA
Sbjct: 367 G--RVKKKWEIPSEVVVVHKSLENDESPPSPRSITKMPDILPMIRTDRCINESPRNSGPA 424

Query: 21  KRVVDLI 1
           KRV +LI
Sbjct: 425 KRVAELI 431


>ref|XP_002325689.1| predicted protein [Populus trichocarpa] gi|222862564|gb|EEF00071.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score =  138 bits (348), Expect = 1e-30
 Identities = 102/305 (33%), Positives = 150/305 (49%), Gaps = 10/305 (3%)
 Frame = -2

Query: 885 RTDIRRRGLSLGPEQISGGIRSRTKERVGSSISFQSRKNRRKSCFSKLQDIDEEKVAKGR 706
           ++ I RRG+SLGP +I  G +SR                     F   QD++        
Sbjct: 174 KSKINRRGVSLGPSEILSGSKSRL--------------------FCGKQDMN-------- 205

Query: 705 GISLGLLVNNVNATRKTRVQVENTNIEFAGMSSKKCSFNFKEFNEDKVTKQRG-GRSLSP 529
                           T V ++N          K C +  +E +E K TK+RG   S+SP
Sbjct: 206 ----------------TPVSIQNRR--------KSCFWKLEEIDELKATKERGKSLSVSP 241

Query: 528 EPRLPVSMNQALKRGLTSVGLKKLGMKDSGVLSSVQPKKLFKETELSLGSKKAVVRNGKV 349
             R  VS  Q  K+ +T+VG ++   K+ G+++S+QPK LFK+ E S+ +KK  ++ G+V
Sbjct: 242 RSRKNVSKIQFPKQAVTTVGSRRSVKKEDGIIASIQPKNLFKDGEKSVTNKKP-LKPGRV 300

Query: 348 IASRF--------NGNQKLPEQRKRSLPEHNEEDVERCENKCSLITEKSRSYLQDSGLNQ 193
           +ASR+        NGN    E RKRSLP++ +EDV +            R   + +G  Q
Sbjct: 301 VASRYSQIGTNQSNGNLSASEARKRSLPDNEKEDVNK------------RRASRGNGACQ 348

Query: 192 VIGTRRVKKRWEIPSEVIIHXXXXXXXXXXXSK-MASLLPKIRTNRCTNGSPRDSGPAKR 16
            + + RVKK+WEIP EV+++              +A +LPKIRT RC   +PRDSG AKR
Sbjct: 349 RMDSGRVKKKWEIPIEVVVYKGDDEGESPPTVSTVADVLPKIRTVRCVAETPRDSGAAKR 408

Query: 15  VVDLI 1
           V DL+
Sbjct: 409 VADLV 413


>ref|XP_002319928.1| predicted protein [Populus trichocarpa] gi|222858304|gb|EEE95851.1|
           predicted protein [Populus trichocarpa]
          Length = 446

 Score =  138 bits (347), Expect = 2e-30
 Identities = 102/305 (33%), Positives = 149/305 (48%), Gaps = 10/305 (3%)
 Frame = -2

Query: 885 RTDIRRRGLSLGPEQISGGIRSRTKERVGSSISFQSRKNRRKSCFSKLQDIDEEKVAKGR 706
           ++ I RRG+SLGP +I  G +SR                     F K +           
Sbjct: 174 KSKINRRGVSLGPSEIFSGSKSRL-------------------LFGKQE----------- 203

Query: 705 GISLGLLVNNVNATRKTRVQVENTNIEFAGMSSKKCSFNFKEFNEDKVTKQRG-GRSLSP 529
                          KT V  +N          K C +  +E +E K TK+RG   S+SP
Sbjct: 204 --------------MKTPVSTQNRR--------KSCFWKLEEIDELKATKERGKSLSVSP 241

Query: 528 EPRLPVSMNQALKRGLTSVGLKKLGMKDSGVLSSVQPKKLFKETELSLGSKKAVVRNGKV 349
             R  VS  Q  K+ +T+VG ++   K+ GV++S+QPK LFK+ E S+ +KK  ++ G+V
Sbjct: 242 RSRKNVSKIQVPKQAVTTVGSRRSVKKEDGVIASIQPKNLFKDGERSVPNKKP-LKPGRV 300

Query: 348 IASRF--------NGNQKLPEQRKRSLPEHNEEDVERCENKCSLITEKSRSYLQDSGLNQ 193
           +ASR+        NGN    E RKRSLP++ +EDV +            R   + +G++Q
Sbjct: 301 VASRYNQIGTNQSNGNLTASEARKRSLPDNEKEDVNK------------RRASRGNGVSQ 348

Query: 192 VIGTRRVKKRWEIPSEVIIHXXXXXXXXXXXSKMAS-LLPKIRTNRCTNGSPRDSGPAKR 16
              + RVKKRWEIPSEV+++             + + +LP I+T R    +PRDSGPAKR
Sbjct: 349 RAESGRVKKRWEIPSEVVVYKDDAEEESPQAVSVVTDMLPNIKTVRSVAETPRDSGPAKR 408

Query: 15  VVDLI 1
           V DL+
Sbjct: 409 VADLV 413


>gb|ADN33895.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 458

 Score =  125 bits (315), Expect = 1e-26
 Identities = 92/253 (36%), Positives = 136/253 (53%), Gaps = 10/253 (3%)
 Frame = -2

Query: 729 EEKVAKGRGISLGL--LVNNVNATRKTRVQVENTNIEFAGMSSKKCSFNFKEFNEDKVTK 556
           E K+ K RG+SLG   +   + A R+ + ++  T  +      + C     + +E K   
Sbjct: 190 EPKICKNRGLSLGPSEIHGGIGARRQGKTEI--TPAQRIQNRRQSCLPKLLDIDEVKAKN 247

Query: 555 QRGGR-SLSPEPRLPVSMNQALKRGLTSVGLKKLGMKDSGVLSSVQPKKLFKETELSLG- 382
           +RG   SLSP+ R  +   Q +++  T++ + K  +K  GV  S+QPKKLFK+ E S+  
Sbjct: 248 RRGNSFSLSPKSRRTLIKAQTVRKPATTI-VSKRPVKKDGVFESIQPKKLFKDVEKSVPP 306

Query: 381 -SKKAVVRNGKVIASRFN----GNQKLPEQRKRSLPEHNEEDVERCENKCSLITEKSRSY 217
            S K  +R G++IASR+N     +Q   E RKRSLP + ++D     +K    ++ S+S 
Sbjct: 307 TSVKKPLRTGRIIASRYNQTNESSQVPTENRKRSLPGNCKDDGSSRYDKRRSSSDLSQSK 366

Query: 216 LQDSGLNQVIGTRRVKKRWEIPSEV-IIHXXXXXXXXXXXSKMASLLPKIRTNRCTNGSP 40
              S         RVKKRW+IP+E+ I+            SK+   LP+IRT RC N SP
Sbjct: 367 APQS---------RVKKRWDIPNEIMILQQEMEETCLESVSKVGDKLPRIRTTRCANMSP 417

Query: 39  RDSGPAKRVVDLI 1
           RDSGPAKRV +LI
Sbjct: 418 RDSGPAKRVSELI 430


>ref|XP_002517992.1| conserved hypothetical protein [Ricinus communis]
           gi|223542974|gb|EEF44510.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 443

 Score =  124 bits (310), Expect = 4e-26
 Identities = 93/261 (35%), Positives = 140/261 (53%), Gaps = 16/261 (6%)
 Frame = -2

Query: 735 IDEEKVAKGRGISLGLLVNNVNATRKTRV---QVENTNIEFAGMSSKKCSFNFKEFNEDK 565
           I+E      RG+SLG   + + +  K R+   Q  +T +       K C +  +E +E K
Sbjct: 170 IEEPPKINRRGVSLG--PSEIYSATKARLLSKQEMSTPVSTKNRR-KSCFWKLEEIDELK 226

Query: 564 VTKQRG-GRSLSPEPRLPVSMNQALKRGLTSVGLKKLGMKDSGVLSSVQPKKLFKETELS 388
            TK+RG   S+SP  R  +S  QA K   T++G +K   K+ G+L+S+QPK LFK+ + S
Sbjct: 227 ATKERGKSSSVSPRSRKNLSKVQAPKMAATTIGSRKSVKKEDGILASIQPKTLFKDGQKS 286

Query: 387 LGSKKAVVRNGKVIASRFN--------GNQKLPEQRKRSLPEHNEEDVERCENKCSLITE 232
           + +KK  V+ G+V+ SR+N        GN      RKRSLP+ ++ED  +          
Sbjct: 287 VPNKKP-VKPGRVVPSRYNQIATNQSDGNF---SARKRSLPDSDKEDANK---------- 332

Query: 231 KSRSYLQDSGLNQVI-GTRRVKKRWEIPSEVII---HXXXXXXXXXXXSKMASLLPKIRT 64
             R   +++G NQ I  + + KK+WEIPSE+++               S +A +LPKI+T
Sbjct: 333 --RRASRENGANQRIESSSKAKKKWEIPSELVMFKSDDAIVGESLKVKSPVADVLPKIKT 390

Query: 63  NRCTNGSPRDSGPAKRVVDLI 1
            R  N +PRDSG AKRV DL+
Sbjct: 391 FRSVNETPRDSGAAKRVADLV 411


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