BLASTX nr result

ID: Coptis21_contig00017438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017438
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323957.1| predicted protein [Populus trichocarpa] gi|2...   217   7e-55
emb|CBI38223.3| unnamed protein product [Vitis vinifera]              216   1e-54
ref|XP_002269775.1| PREDICTED: uncharacterized protein LOC100267...   216   1e-54
emb|CAN80154.1| hypothetical protein VITISV_038130 [Vitis vinifera]   216   1e-54
ref|XP_002522617.1| conserved hypothetical protein [Ricinus comm...   214   8e-54

>ref|XP_002323957.1| predicted protein [Populus trichocarpa] gi|222866959|gb|EEF04090.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score =  217 bits (553), Expect = 7e-55
 Identities = 98/125 (78%), Positives = 114/125 (91%)
 Frame = -1

Query: 376 LRFVLQVNLMNSTDILVSTHGAQLTNMFLMDRNSSVMEFFPKGWLKLAGVGQYVYHFIAS 197
           L F  QV +M+ TDILVSTHGAQLTNMFLMD+NSSVMEFFPKGWLK+AGVGQYVYH+IAS
Sbjct: 327 LTFCEQVKMMSLTDILVSTHGAQLTNMFLMDKNSSVMEFFPKGWLKVAGVGQYVYHWIAS 386

Query: 196 WSGMKHRGAWRDPNGEECPFPEDDRRCMSIYKGGMIGYNETYFTEWARNVLNDVKINKLE 17
           WSGM+H+GAWRD NG+ECP+ EDDRRCMSIYK G +G+NETYF+EWAR+VLN+VKI KLE
Sbjct: 387 WSGMRHQGAWRDLNGDECPYAEDDRRCMSIYKNGKVGFNETYFSEWARDVLNEVKIRKLE 446

Query: 16  EASKR 2
           EA+ +
Sbjct: 447 EAASK 451


>emb|CBI38223.3| unnamed protein product [Vitis vinifera]
          Length = 471

 Score =  216 bits (551), Expect = 1e-54
 Identities = 98/122 (80%), Positives = 109/122 (89%)
 Frame = -1

Query: 376 LRFVLQVNLMNSTDILVSTHGAQLTNMFLMDRNSSVMEFFPKGWLKLAGVGQYVYHFIAS 197
           L F  QV LM+ TDILVS HGAQLTNMFLMDRNS+VMEFFPKGWLKLAGVGQYVYH+IAS
Sbjct: 335 LTFCQQVKLMSLTDILVSPHGAQLTNMFLMDRNSNVMEFFPKGWLKLAGVGQYVYHWIAS 394

Query: 196 WSGMKHRGAWRDPNGEECPFPEDDRRCMSIYKGGMIGYNETYFTEWARNVLNDVKINKLE 17
           WSGMKH GAWRDPNG++CP+PEDDRRCMSIYK G IGYN+T+F EWARN+L +VK  K+E
Sbjct: 395 WSGMKHEGAWRDPNGDDCPYPEDDRRCMSIYKNGRIGYNDTFFEEWARNILVEVKTRKME 454

Query: 16  EA 11
           EA
Sbjct: 455 EA 456


>ref|XP_002269775.1| PREDICTED: uncharacterized protein LOC100267753 [Vitis vinifera]
          Length = 491

 Score =  216 bits (551), Expect = 1e-54
 Identities = 98/122 (80%), Positives = 109/122 (89%)
 Frame = -1

Query: 376 LRFVLQVNLMNSTDILVSTHGAQLTNMFLMDRNSSVMEFFPKGWLKLAGVGQYVYHFIAS 197
           L F  QV LM+ TDILVS HGAQLTNMFLMDRNS+VMEFFPKGWLKLAGVGQYVYH+IAS
Sbjct: 355 LTFCQQVKLMSLTDILVSPHGAQLTNMFLMDRNSNVMEFFPKGWLKLAGVGQYVYHWIAS 414

Query: 196 WSGMKHRGAWRDPNGEECPFPEDDRRCMSIYKGGMIGYNETYFTEWARNVLNDVKINKLE 17
           WSGMKH GAWRDPNG++CP+PEDDRRCMSIYK G IGYN+T+F EWARN+L +VK  K+E
Sbjct: 415 WSGMKHEGAWRDPNGDDCPYPEDDRRCMSIYKNGRIGYNDTFFEEWARNILVEVKTRKME 474

Query: 16  EA 11
           EA
Sbjct: 475 EA 476


>emb|CAN80154.1| hypothetical protein VITISV_038130 [Vitis vinifera]
          Length = 489

 Score =  216 bits (551), Expect = 1e-54
 Identities = 98/122 (80%), Positives = 109/122 (89%)
 Frame = -1

Query: 376 LRFVLQVNLMNSTDILVSTHGAQLTNMFLMDRNSSVMEFFPKGWLKLAGVGQYVYHFIAS 197
           L F  QV LM+ TDILVS HGAQLTNMFLMDRNS+VMEFFPKGWLKLAGVGQYVYH+IAS
Sbjct: 353 LTFCQQVKLMSLTDILVSPHGAQLTNMFLMDRNSNVMEFFPKGWLKLAGVGQYVYHWIAS 412

Query: 196 WSGMKHRGAWRDPNGEECPFPEDDRRCMSIYKGGMIGYNETYFTEWARNVLNDVKINKLE 17
           WSGMKH GAWRDPNG++CP+PEDDRRCMSIYK G IGYN+T+F EWARN+L +VK  K+E
Sbjct: 413 WSGMKHEGAWRDPNGDDCPYPEDDRRCMSIYKNGRIGYNDTFFEEWARNILVEVKTRKME 472

Query: 16  EA 11
           EA
Sbjct: 473 EA 474


>ref|XP_002522617.1| conserved hypothetical protein [Ricinus communis]
           gi|223538093|gb|EEF39704.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 487

 Score =  214 bits (544), Expect = 8e-54
 Identities = 95/125 (76%), Positives = 112/125 (89%)
 Frame = -1

Query: 376 LRFVLQVNLMNSTDILVSTHGAQLTNMFLMDRNSSVMEFFPKGWLKLAGVGQYVYHFIAS 197
           L F  QV LM+ TDIL+S HGAQLTNMFLM++NSSVMEFFPKGWLKLAGVGQ+VYH+IAS
Sbjct: 353 LTFCEQVKLMSMTDILISPHGAQLTNMFLMNKNSSVMEFFPKGWLKLAGVGQFVYHWIAS 412

Query: 196 WSGMKHRGAWRDPNGEECPFPEDDRRCMSIYKGGMIGYNETYFTEWARNVLNDVKINKLE 17
           WSGMKH+GAWRDP+G+ CP+P+DDRRCMSIYKGG IG+NET+F+EW RNVLN+VK+ K E
Sbjct: 413 WSGMKHQGAWRDPDGDHCPYPDDDRRCMSIYKGGKIGFNETHFSEWGRNVLNEVKLRKAE 472

Query: 16  EASKR 2
           E S +
Sbjct: 473 EMSHK 477


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