BLASTX nr result

ID: Coptis21_contig00017416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017416
         (1693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238687.1| uncharacterized protein LOC100527099 [Glycin...    82   6e-13
ref|XP_002331222.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-12
ref|NP_001237403.1| uncharacterized protein LOC100306604 [Glycin...    78   6e-12
gb|AFK47958.1| unknown [Lotus japonicus]                               76   2e-11
emb|CBI35799.3| unnamed protein product [Vitis vinifera]               75   4e-11

>ref|NP_001238687.1| uncharacterized protein LOC100527099 [Glycine max]
           gi|255631552|gb|ACU16143.1| unknown [Glycine max]
          Length = 139

 Score = 81.6 bits (200), Expect = 6e-13
 Identities = 42/85 (49%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
 Frame = -1

Query: 442 VFEDHSLGIICYKNESGEIICEGYDEGPRFHKQQVERKTYHHREHQIIDLEIINLLQKQQ 263
           ++ED S GI+CY++ESGEIICEGYDEGPR+  Q++ R T+H R     D+EI+NLLQ+Q 
Sbjct: 57  IYEDQSQGILCYEDESGEIICEGYDEGPRY--QRIPRPTHHPR-----DVEIMNLLQQQS 109

Query: 262 RFRFVQ-DSVIHLAEKGLAVLEELD 191
             + V+ + + HLA+  L + E+L+
Sbjct: 110 WLQIVKGEEINHLAKGALHLQEDLN 134


>ref|XP_002331222.1| predicted protein [Populus trichocarpa] gi|222873343|gb|EEF10474.1|
           predicted protein [Populus trichocarpa]
          Length = 140

 Score = 79.0 bits (193), Expect = 4e-12
 Identities = 42/82 (51%), Positives = 57/82 (69%)
 Frame = -1

Query: 442 VFEDHSLGIICYKNESGEIICEGYDEGPRFHKQQVERKTYHHREHQIIDLEIINLLQKQQ 263
           VFE+ + GI+CY++ESGEIICEG+DEGPRFH QQ++  +YH R     D EIINLLQ Q+
Sbjct: 55  VFENRAEGIVCYRDESGEIICEGFDEGPRFH-QQLQCSSYHPR-----DAEIINLLQ-QR 107

Query: 262 RFRFVQDSVIHLAEKGLAVLEE 197
             + V     +  E G+ V++E
Sbjct: 108 LLQIVNGGEFNNTENGVIVVQE 129


>ref|NP_001237403.1| uncharacterized protein LOC100306604 [Glycine max]
           gi|255629045|gb|ACU14867.1| unknown [Glycine max]
          Length = 139

 Score = 78.2 bits (191), Expect = 6e-12
 Identities = 41/85 (48%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
 Frame = -1

Query: 442 VFEDHSLGIICYKNESGEIICEGYDEGPRFHKQQVERKTYHHREHQIIDLEIINLLQKQQ 263
           ++ED S GIICY++ESGEIICEGYDEGPR+H+  +   T H R     D+EI+NL Q+Q 
Sbjct: 57  IYEDQSQGIICYEDESGEIICEGYDEGPRYHR--IPSPTQHPR-----DVEIMNLQQQQS 109

Query: 262 RFRFVQ-DSVIHLAEKGLAVLEELD 191
             + V+ + + HLA+  L + E+L+
Sbjct: 110 WLQIVKGEEINHLAKGALHLQEDLN 134


>gb|AFK47958.1| unknown [Lotus japonicus]
          Length = 144

 Score = 76.3 bits (186), Expect = 2e-11
 Identities = 40/84 (47%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
 Frame = -1

Query: 442 VFEDHSLGIICYKNESGEIICEGYDEGPRFHKQQVERKTYHHREHQ-IIDLEIINLLQKQ 266
           V+ED S GIICY+++SGEIICEGYDEGP +  Q++ R  YH        D EI+NLL KQ
Sbjct: 56  VYEDQSKGIICYRDKSGEIICEGYDEGPNY--QRISRPIYHRSGFAGFSDAEIMNLLPKQ 113

Query: 265 QRFRFVQDSVIHLAEKGLAVLEEL 194
              + V+   I    +G+ +LE+L
Sbjct: 114 SWLQIVKAEEIDFKVEGVPLLEDL 137


>emb|CBI35799.3| unnamed protein product [Vitis vinifera]
          Length = 105

 Score = 75.5 bits (184), Expect = 4e-11
 Identities = 34/57 (59%), Positives = 44/57 (77%)
 Frame = -1

Query: 442 VFEDHSLGIICYKNESGEIICEGYDEGPRFHKQQVERKTYHHREHQIIDLEIINLLQ 272
           VFED S GI+CY+++ GEI+CEGYDEGPR H  +++RK YH R+ +IIDL   N LQ
Sbjct: 26  VFEDQSKGIVCYRDDKGEIVCEGYDEGPRLH-HELQRKNYHPRDAEIIDLLQQNWLQ 81


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