BLASTX nr result

ID: Coptis21_contig00017404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017404
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270801.2| PREDICTED: uncharacterized protein LOC100243...    72   5e-11
gb|ACH87180.1| unknown protein [Camellia sinensis]                     68   9e-10
ref|XP_003630485.1| hypothetical protein MTR_8g097040 [Medicago ...    68   1e-09
ref|XP_003630483.1| hypothetical protein MTR_8g097040 [Medicago ...    68   1e-09
ref|XP_002299315.1| predicted protein [Populus trichocarpa] gi|1...    68   1e-09

>ref|XP_002270801.2| PREDICTED: uncharacterized protein LOC100243721 [Vitis vinifera]
          Length = 127

 Score = 72.4 bits (176), Expect = 5e-11
 Identities = 34/39 (87%), Positives = 37/39 (94%)
 Frame = +2

Query: 398 SVTFVIGFILMPWVLGLVIVLYFVGIVSNLSMLGRAILC 514
           SVTF IGFILMPWVLGLV+V YFVGIVSNLS+LGRAI+C
Sbjct: 71  SVTFFIGFILMPWVLGLVMVFYFVGIVSNLSVLGRAIIC 109


>gb|ACH87180.1| unknown protein [Camellia sinensis]
          Length = 129

 Score = 68.2 bits (165), Expect = 9e-10
 Identities = 32/39 (82%), Positives = 36/39 (92%)
 Frame = +2

Query: 398 SVTFVIGFILMPWVLGLVIVLYFVGIVSNLSMLGRAILC 514
           SVTF IGF+LMPWVLGLV+V Y VGIVS+LSM+GRAILC
Sbjct: 73  SVTFFIGFMLMPWVLGLVMVFYVVGIVSSLSMIGRAILC 111


>ref|XP_003630485.1| hypothetical protein MTR_8g097040 [Medicago truncatula]
           gi|355524507|gb|AET04961.1| hypothetical protein
           MTR_8g097040 [Medicago truncatula]
          Length = 119

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 32/48 (66%), Positives = 38/48 (79%)
 Frame = +2

Query: 398 SVTFVIGFILMPWVLGLVIVLYFVGIVSNLSMLGRAILCPCPPAVSSP 541
           SVTFVIGF+LMPWV+GLV+V Y  G+VS LS+LGR+ILC   P   SP
Sbjct: 67  SVTFVIGFMLMPWVIGLVMVFYVAGVVSFLSVLGRSILCFASPRKDSP 114


>ref|XP_003630483.1| hypothetical protein MTR_8g097040 [Medicago truncatula]
           gi|355524505|gb|AET04959.1| hypothetical protein
           MTR_8g097040 [Medicago truncatula]
          Length = 177

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 32/48 (66%), Positives = 38/48 (79%)
 Frame = +2

Query: 398 SVTFVIGFILMPWVLGLVIVLYFVGIVSNLSMLGRAILCPCPPAVSSP 541
           SVTFVIGF+LMPWV+GLV+V Y  G+VS LS+LGR+ILC   P   SP
Sbjct: 79  SVTFVIGFMLMPWVIGLVMVFYVAGVVSFLSVLGRSILCFASPRKDSP 126


>ref|XP_002299315.1| predicted protein [Populus trichocarpa] gi|118486493|gb|ABK95086.1|
           unknown [Populus trichocarpa]
           gi|118489282|gb|ABK96446.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|222846573|gb|EEE84120.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 33/51 (64%), Positives = 38/51 (74%)
 Frame = +2

Query: 398 SVTFVIGFILMPWVLGLVIVLYFVGIVSNLSMLGRAILCPCPPAVSSPTIE 550
           SVTF IGF+LMPWVLGLV+V Y  GIVS +SMLGR++LC      SSP  E
Sbjct: 72  SVTFFIGFLLMPWVLGLVMVFYVAGIVSTISMLGRSLLCYATAPPSSPRKE 122