BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017392
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271867.1| PREDICTED: uncharacterized protein LOC100263...    83   2e-14
ref|XP_002526725.1| conserved hypothetical protein [Ricinus comm...    79   3e-13
ref|NP_568185.1| Mitochondrial transcription termination factor ...    79   3e-13
ref|XP_002520663.1| conserved hypothetical protein [Ricinus comm...    79   5e-13
ref|XP_002871294.1| mitochondrial transcription termination fact...    78   9e-13

>ref|XP_002271867.1| PREDICTED: uncharacterized protein LOC100263451 [Vitis vinifera]
          Length = 412

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 42/78 (53%), Positives = 55/78 (70%)
 Frame = -3

Query: 236 KNIMSTMEYFVNKLGFDPLRISKYPQFLNLSLEKRIIPRTSVIKVLVSNGVVKKTHSIHR 57
           K IMSTM++ VNK+G+    I+K P  L+ SLEKRIIPR SV +VL+  G+VKK   +  
Sbjct: 303 KKIMSTMDFLVNKMGWKLTAITKVPSTLSYSLEKRIIPRCSVARVLILKGLVKKDMGLGA 362

Query: 56  VLRVTDKVFLDEFVMKYE 3
            LR T+K FLD FV+KY+
Sbjct: 363 FLRFTEKKFLDRFVIKYQ 380


>ref|XP_002526725.1| conserved hypothetical protein [Ricinus communis]
           gi|223533914|gb|EEF35639.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 441

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 38/78 (48%), Positives = 60/78 (76%)
 Frame = -3

Query: 236 KNIMSTMEYFVNKLGFDPLRISKYPQFLNLSLEKRIIPRTSVIKVLVSNGVVKKTHSIHR 57
           K IM  M+Y++NK+G+D   I+K+P  ++LSLEKR+IPR SVI+VL+S G+V+ T S+  
Sbjct: 342 KKIMKMMDYYINKMGWDSSSIAKHPLLISLSLEKRVIPRCSVIQVLLSKGLVRLT-SLAT 400

Query: 56  VLRVTDKVFLDEFVMKYE 3
            LR+++++FL +FV  Y+
Sbjct: 401 SLRISEELFLHKFVRPYK 418


>ref|NP_568185.1| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana]
           gi|13878065|gb|AAK44110.1|AF370295_1 unknown protein
           [Arabidopsis thaliana] gi|6562304|emb|CAB62602.1|
           putative protein [Arabidopsis thaliana]
           gi|10176724|dbj|BAB09954.1| unnamed protein product
           [Arabidopsis thaliana] gi|17104655|gb|AAL34216.1|
           unknown protein [Arabidopsis thaliana]
           gi|21592327|gb|AAM64278.1| unknown [Arabidopsis
           thaliana] gi|332003836|gb|AED91219.1| Mitochondrial
           transcription termination factor family protein
           [Arabidopsis thaliana]
          Length = 405

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 42/78 (53%), Positives = 55/78 (70%)
 Frame = -3

Query: 236 KNIMSTMEYFVNKLGFDPLRISKYPQFLNLSLEKRIIPRTSVIKVLVSNGVVKKTHSIHR 57
           + I  TMEYFVN++   P  I++ P  L  SLEKRIIPR SV KVLVSNG+VK+  S+  
Sbjct: 312 RKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSLTS 371

Query: 56  VLRVTDKVFLDEFVMKYE 3
           +L   +KVFL++ V+KYE
Sbjct: 372 LLVPVEKVFLEKLVIKYE 389


>ref|XP_002520663.1| conserved hypothetical protein [Ricinus communis]
           gi|223540048|gb|EEF41625.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 377

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 41/78 (52%), Positives = 54/78 (69%)
 Frame = -3

Query: 236 KNIMSTMEYFVNKLGFDPLRISKYPQFLNLSLEKRIIPRTSVIKVLVSNGVVKKTHSIHR 57
           K IM  M++FVNK+G     I++ P  L  SLEKRI+PR  VI+VL++ G+VKK  S+  
Sbjct: 280 KKIMLAMDFFVNKMGLPSKVIAQCPVLLFFSLEKRIVPRCRVIRVLMNKGLVKKDVSLAT 339

Query: 56  VLRVTDKVFLDEFVMKYE 3
           VL  T+K FLD FV+KYE
Sbjct: 340 VLVPTEKCFLDRFVIKYE 357


>ref|XP_002871294.1| mitochondrial transcription termination factor family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297317131|gb|EFH47553.1| mitochondrial transcription
           termination factor family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 404

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 41/78 (52%), Positives = 55/78 (70%)
 Frame = -3

Query: 236 KNIMSTMEYFVNKLGFDPLRISKYPQFLNLSLEKRIIPRTSVIKVLVSNGVVKKTHSIHR 57
           + I  TME+FVN++   P  I++ P  L  SLEKRIIPR SV KVLVSNG+VK+  S+  
Sbjct: 311 RKINRTMEFFVNEMNLAPRSIAECPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSLTS 370

Query: 56  VLRVTDKVFLDEFVMKYE 3
           +L   +KVFL++ V+KYE
Sbjct: 371 LLVPVEKVFLEKLVIKYE 388