BLASTX nr result

ID: Coptis21_contig00017388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017388
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613461.1| Microtubule-associated protein TORTIFOLIA1 [...   110   1e-22
ref|XP_004146798.1| PREDICTED: microtubule-associated protein TO...   110   2e-22
ref|XP_003517749.1| PREDICTED: microtubule-associated protein SP...   109   3e-22
ref|NP_001237815.1| uncharacterized protein LOC100527301 [Glycin...   106   2e-21
emb|CBI15107.3| unnamed protein product [Vitis vinifera]              101   5e-20

>ref|XP_003613461.1| Microtubule-associated protein TORTIFOLIA1 [Medicago truncatula]
           gi|355514796|gb|AES96419.1| Microtubule-associated
           protein TORTIFOLIA1 [Medicago truncatula]
          Length = 750

 Score =  110 bits (275), Expect = 1e-22
 Identities = 58/140 (41%), Positives = 86/140 (61%), Gaps = 2/140 (1%)
 Frame = +3

Query: 3   RVNGLDMALDEIMYDMTVPTGRMSTSDPSENTCCKLPGAEFLSPKFWKKTDGRYLTSRFT 182
           RV GL+MALDEI YD+ V +GR+  +D  ++ CCKLPG +FLS KFWKKTD RY TSR +
Sbjct: 520 RVYGLEMALDEISYDLAVSSGRIPNTDAIDDMCCKLPGTDFLSSKFWKKTDSRYTTSRLS 579

Query: 183 F--SGSNSWPHNMVDKDTSAEPSKLENRKFYRQAGGGGFVVSPLEPENRNDFKRNPEVYS 356
           F  S S +  HN  D++ S E     +++F  +   GG  ++PL  E +++ K +   +S
Sbjct: 580 FGSSASTNLVHNATDRNGSKEIFTTNSKRFQHRRDEGGSFMNPL-AEIQSNLKGSSGQHS 638

Query: 357 NSLHTSIFQDAGRRQARTGT 416
             +  +  QDAG  Q+ + +
Sbjct: 639 YKISKNFAQDAGSAQSNSSS 658


>ref|XP_004146798.1| PREDICTED: microtubule-associated protein TORTIFOLIA1-like [Cucumis
           sativus] gi|449518027|ref|XP_004166045.1| PREDICTED:
           microtubule-associated protein TORTIFOLIA1-like [Cucumis
           sativus]
          Length = 658

 Score =  110 bits (274), Expect = 2e-22
 Identities = 57/131 (43%), Positives = 87/131 (66%), Gaps = 3/131 (2%)
 Frame = +3

Query: 3   RVNGLDMALDEIMYDMTVPTGRMSTSDPSENTCCKLPGAEFLSPKFWKKTDGRYLTSRF- 179
           RV+GL+MALDEI YD+ + +GR+  S  +EN+CCKLPGAEFLS KFW++ +GRY +S+F 
Sbjct: 517 RVHGLEMALDEISYDLGLSSGRVPNSSFAENSCCKLPGAEFLSSKFWRRAEGRYSSSKFC 576

Query: 180 --TFSGSNSWPHNMVDKDTSAEPSKLENRKFYRQAGGGGFVVSPLEPENRNDFKRNPEVY 353
             T   S + PH+ +D+D+  EP K +N + +R    GG V++PL  +   +F+ N  +Y
Sbjct: 577 STTQVSSPNDPHHTLDRDSVTEPLK-QNNQIFRTERRGGLVMNPL-ADIDGEFRENMGLY 634

Query: 354 SNSLHTSIFQD 386
              L  ++ Q+
Sbjct: 635 PKRLLKTMIQE 645


>ref|XP_003517749.1| PREDICTED: microtubule-associated protein SPIRAL2-like [Glycine
           max]
          Length = 793

 Score =  109 bits (272), Expect = 3e-22
 Identities = 63/134 (47%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
 Frame = +3

Query: 3   RVNGLDMALDEIMYDMTVPTGRMSTSDPSENTCCKLPGAEFLSPKFWKKTDGRYLTSRFT 182
           RV+GL+MALDEI +D+ V  GR+S  D +E+TCCKLPG +FLS KFWKKT+GRY TSRF+
Sbjct: 520 RVHGLEMALDEISHDLAVSGGRVSNIDATEDTCCKLPGTDFLSSKFWKKTEGRYSTSRFS 579

Query: 183 FSG--SNSWPHNMVDKDTSAEPSKLENRKFYRQAGGGGFVVSPLEPENRNDFKRNPEVYS 356
                S    H   +KD   E     N +   Q G GG+ V+PL  E ++D K +   ++
Sbjct: 580 LGSIPSTDAVHIATNKDGKREILTANNNRL--QHGKGGYFVNPL-AEVQSDLKGH---HT 633

Query: 357 NSLHTSIFQDAGRR 398
             L  ++FQDA RR
Sbjct: 634 YKLSKNLFQDAVRR 647


>ref|NP_001237815.1| uncharacterized protein LOC100527301 [Glycine max]
           gi|255632041|gb|ACU16373.1| unknown [Glycine max]
          Length = 154

 Score =  106 bits (265), Expect = 2e-21
 Identities = 61/134 (45%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
 Frame = +3

Query: 3   RVNGLDMALDEIMYDMTVPTGRMSTSDPSENTCCKLPGAEFLSPKFWKKTDGRYLTSRFT 182
           RV+GL++ALDEI  D+ VP  R+S  D +E+TCCKLPG +FLS KFWKKT+GRY TSRF+
Sbjct: 7   RVHGLEIALDEISQDLAVPGARVSNIDATEDTCCKLPGTDFLSSKFWKKTEGRYSTSRFS 66

Query: 183 FSG--SNSWPHNMVDKDTSAEPSKLENRKFYRQAGGGGFVVSPLEPENRNDFKRNPEVYS 356
                S +  HN  +KD S E     N +   Q G GG+ V+P   E ++D K +   ++
Sbjct: 67  LGSIPSTNAVHNATNKDGSREILTANNSRL--QHGKGGYFVNP-SAEVQSDLKGH---HT 120

Query: 357 NSLHTSIFQDAGRR 398
             +  ++ QDA RR
Sbjct: 121 YKVSKNMVQDAMRR 134


>emb|CBI15107.3| unnamed protein product [Vitis vinifera]
          Length = 521

 Score =  101 bits (252), Expect = 5e-20
 Identities = 61/132 (46%), Positives = 84/132 (63%), Gaps = 3/132 (2%)
 Frame = +3

Query: 3   RVNGLDMALDEIMYDMTVPTGRMSTSDPSENTCCKLPGAEFLSPKFWKKTDGRYLTSRFT 182
           RV+GL++ALDEI +D+ V   RMS++D +  TCC LPGA+FLS KFW+KT+GR  TSRF+
Sbjct: 392 RVHGLELALDEISFDLAVSNRRMSSTDTAGATCCMLPGADFLSSKFWRKTEGRGSTSRFS 451

Query: 183 FS---GSNSWPHNMVDKDTSAEPSKLENRKFYRQAGGGGFVVSPLEPENRNDFKRNPEVY 353
            S    S +    +  K+ +A   K EN +F R  GGGGFVV+PL  E  +D +   EV 
Sbjct: 452 PSHATQSGTAMRYIAGKNDNAGTFKSENLRF-RLQGGGGFVVNPL-AEIPSDSRDISEVS 509

Query: 354 SNSLHTSIFQDA 389
           SN +  +  + A
Sbjct: 510 SNRISKNAHETA 521


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