BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017383
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134127.1| PREDICTED: protein RDM1-like isoform 1 [Cucu...   171   9e-41
ref|XP_003610752.1| hypothetical protein MTR_5g006610 [Medicago ...   154   9e-36
ref|XP_002311634.1| predicted protein [Populus trichocarpa] gi|2...   154   1e-35
ref|NP_001237231.1| uncharacterized protein LOC100500129 [Glycin...   151   6e-35
ref|XP_002279112.2| PREDICTED: protein RDM1 [Vitis vinifera]          150   1e-34

>ref|XP_004134127.1| PREDICTED: protein RDM1-like isoform 1 [Cucumis sativus]
           gi|449432682|ref|XP_004134128.1| PREDICTED: protein
           RDM1-like isoform 2 [Cucumis sativus]
           gi|449504162|ref|XP_004162269.1| PREDICTED: protein
           RDM1-like isoform 1 [Cucumis sativus]
           gi|449504166|ref|XP_004162270.1| PREDICTED: protein
           RDM1-like isoform 2 [Cucumis sativus]
          Length = 174

 Score =  171 bits (432), Expect = 9e-41
 Identities = 77/109 (70%), Positives = 95/109 (87%)
 Frame = +3

Query: 234 FCLPAKQITAQGTVLKRAEMYQEYMKLIQIPSLHGSAIPFTTWQGLAKSLKQLYGQPLHY 413
           F +PAK++T++G ++KRAEMYQEYMK IQIP+  GS IPFTTW GL KS+KQLYGQPLHY
Sbjct: 42  FKIPAKEMTSEGMLMKRAEMYQEYMKQIQIPAQRGSVIPFTTWMGLGKSIKQLYGQPLHY 101

Query: 414 LTNVALKQLDQSRIGSENEHQPLDSVIHPRKAEATIWLMEEVHRLTSSH 560
           LTN+ LKQ DQ R+GS +E++PLD+VIHP KAEAT+WL+EE+HR TSSH
Sbjct: 102 LTNILLKQWDQLRLGSADEYKPLDTVIHPSKAEATVWLVEEIHRRTSSH 150


>ref|XP_003610752.1| hypothetical protein MTR_5g006610 [Medicago truncatula]
           gi|355512087|gb|AES93710.1| hypothetical protein
           MTR_5g006610 [Medicago truncatula]
           gi|388497794|gb|AFK36963.1| unknown [Medicago
           truncatula]
          Length = 179

 Score =  154 bits (389), Expect = 9e-36
 Identities = 70/106 (66%), Positives = 85/106 (80%)
 Frame = +3

Query: 243 PAKQITAQGTVLKRAEMYQEYMKLIQIPSLHGSAIPFTTWQGLAKSLKQLYGQPLHYLTN 422
           P+  + +   + +RA MYQ+YMK I IPS  GS IPFT+W GL +S+KQLYGQPLHYLTN
Sbjct: 46  PSSDVNSLDALTRRAAMYQDYMKHIPIPSSRGSLIPFTSWMGLGRSIKQLYGQPLHYLTN 105

Query: 423 VALKQLDQSRIGSENEHQPLDSVIHPRKAEATIWLMEEVHRLTSSH 560
           + LKQ DQ RIGSE+E+ PLD +IHPRKAE+TIWLMEE+HR TSSH
Sbjct: 106 ILLKQWDQLRIGSEDEYTPLDDIIHPRKAESTIWLMEEIHRQTSSH 151


>ref|XP_002311634.1| predicted protein [Populus trichocarpa] gi|222851454|gb|EEE89001.1|
           predicted protein [Populus trichocarpa]
          Length = 175

 Score =  154 bits (388), Expect = 1e-35
 Identities = 71/106 (66%), Positives = 87/106 (82%)
 Frame = +3

Query: 243 PAKQITAQGTVLKRAEMYQEYMKLIQIPSLHGSAIPFTTWQGLAKSLKQLYGQPLHYLTN 422
           P K+ T++G +++RAEMYQ+YM+ I IP   GSAIPF++W GL KS+KQLY QPLHYLTN
Sbjct: 46  PIKETTSEGVLIRRAEMYQDYMRHIPIPVQRGSAIPFSSWAGLGKSIKQLYQQPLHYLTN 105

Query: 423 VALKQLDQSRIGSENEHQPLDSVIHPRKAEATIWLMEEVHRLTSSH 560
           + L + DQ RIGSE+EH PLD +IHP KAEATIWL+EEVHR TSSH
Sbjct: 106 ILLNKWDQQRIGSEDEHTPLDIMIHPCKAEATIWLVEEVHRRTSSH 151


>ref|NP_001237231.1| uncharacterized protein LOC100500129 [Glycine max]
           gi|255629410|gb|ACU15051.1| unknown [Glycine max]
          Length = 165

 Score =  151 bits (382), Expect = 6e-35
 Identities = 66/100 (66%), Positives = 86/100 (86%)
 Frame = +3

Query: 261 AQGTVLKRAEMYQEYMKLIQIPSLHGSAIPFTTWQGLAKSLKQLYGQPLHYLTNVALKQL 440
           +Q  +++RAEMYQ+YMK I IP+  G+ IPFT+W GL +S+KQ+YGQPLHYLTN+ LKQ 
Sbjct: 38  SQDALIRRAEMYQDYMKQIPIPNHRGTMIPFTSWMGLGRSMKQIYGQPLHYLTNILLKQW 97

Query: 441 DQSRIGSENEHQPLDSVIHPRKAEATIWLMEEVHRLTSSH 560
           DQ RIGSE+E++PLD+++HP KAEATIWL+EE+HR TSSH
Sbjct: 98  DQLRIGSEDEYKPLDNIVHPHKAEATIWLIEEIHRQTSSH 137


>ref|XP_002279112.2| PREDICTED: protein RDM1 [Vitis vinifera]
          Length = 137

 Score =  150 bits (380), Expect = 1e-34
 Identities = 71/105 (67%), Positives = 87/105 (82%)
 Frame = +3

Query: 243 PAKQITAQGTVLKRAEMYQEYMKLIQIPSLHGSAIPFTTWQGLAKSLKQLYGQPLHYLTN 422
           PA+Q   +  V++RAEMYQEYMK I IP+  GS IPF TW GLAKS+KQLYGQPLHYLTN
Sbjct: 8   PARQEPFEDVVIRRAEMYQEYMKQIPIPARRGSLIPFDTWMGLAKSIKQLYGQPLHYLTN 67

Query: 423 VALKQLDQSRIGSENEHQPLDSVIHPRKAEATIWLMEEVHRLTSS 557
           + +KQ DQ RIGS++E++ LDS+IHP KAEA+IWL+EEVHR T+S
Sbjct: 68  ILVKQWDQLRIGSKDENRSLDSIIHPSKAEASIWLIEEVHRQTTS 112