BLASTX nr result

ID: Coptis21_contig00017380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017380
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268471.2| PREDICTED: LOW QUALITY PROTEIN: villin-4 [Vi...   126   2e-27
emb|CBI17857.3| unnamed protein product [Vitis vinifera]              126   2e-27
ref|XP_002533373.1| villin 1-4, putative [Ricinus communis] gi|2...   122   3e-26
ref|XP_004163020.1| PREDICTED: LOW QUALITY PROTEIN: villin-4-lik...   120   1e-25
ref|XP_004148322.1| PREDICTED: villin-4-like [Cucumis sativus]        120   1e-25

>ref|XP_002268471.2| PREDICTED: LOW QUALITY PROTEIN: villin-4 [Vitis vinifera]
          Length = 1002

 Score =  126 bits (316), Expect = 2e-27
 Identities = 63/87 (72%), Positives = 69/87 (79%)
 Frame = +2

Query: 2    MSSRIEALTIQXXXXXXXXXXXXXLPTYPYERLKTTSTDPVTEIDVTKRETYLSSGEFRE 181
            MSSRIEALTI+             LP YPYERLKTTS +PV EIDVTKRETYLSS EFR+
Sbjct: 916  MSSRIEALTIEEDVKEGEAEDEEGLPIYPYERLKTTSIEPVAEIDVTKRETYLSSEEFRQ 975

Query: 182  KLGVTKDAFYKLPKWKQSKMKMALQLF 262
            K G+TKDAFYKLPKWKQ+K+KMALQLF
Sbjct: 976  KFGMTKDAFYKLPKWKQNKLKMALQLF 1002


>emb|CBI17857.3| unnamed protein product [Vitis vinifera]
          Length = 961

 Score =  126 bits (316), Expect = 2e-27
 Identities = 63/87 (72%), Positives = 69/87 (79%)
 Frame = +2

Query: 2    MSSRIEALTIQXXXXXXXXXXXXXLPTYPYERLKTTSTDPVTEIDVTKRETYLSSGEFRE 181
            MSSRIEALTI+             LP YPYERLKTTS +PV EIDVTKRETYLSS EFR+
Sbjct: 875  MSSRIEALTIEEDVKEGEAEDEEGLPIYPYERLKTTSIEPVAEIDVTKRETYLSSEEFRQ 934

Query: 182  KLGVTKDAFYKLPKWKQSKMKMALQLF 262
            K G+TKDAFYKLPKWKQ+K+KMALQLF
Sbjct: 935  KFGMTKDAFYKLPKWKQNKLKMALQLF 961


>ref|XP_002533373.1| villin 1-4, putative [Ricinus communis] gi|223526795|gb|EEF29018.1|
           villin 1-4, putative [Ricinus communis]
          Length = 196

 Score =  122 bits (306), Expect = 3e-26
 Identities = 59/87 (67%), Positives = 68/87 (78%)
 Frame = +2

Query: 2   MSSRIEALTIQXXXXXXXXXXXXXLPTYPYERLKTTSTDPVTEIDVTKRETYLSSGEFRE 181
           MSS++ +LTIQ             LP YPYERLK  STDP++EIDVTKRETYLSS EFRE
Sbjct: 110 MSSKLGSLTIQEDVKEGEAEDEEGLPIYPYERLKINSTDPISEIDVTKRETYLSSAEFRE 169

Query: 182 KLGVTKDAFYKLPKWKQSKMKMALQLF 262
           K G+TKDAFYK+PKWKQ+K+KMALQLF
Sbjct: 170 KFGMTKDAFYKMPKWKQNKLKMALQLF 196


>ref|XP_004163020.1| PREDICTED: LOW QUALITY PROTEIN: villin-4-like [Cucumis sativus]
          Length = 968

 Score =  120 bits (300), Expect = 1e-25
 Identities = 60/84 (71%), Positives = 66/84 (78%)
 Frame = +2

Query: 11   RIEALTIQXXXXXXXXXXXXXLPTYPYERLKTTSTDPVTEIDVTKRETYLSSGEFREKLG 190
            RIE LTIQ             L TYPYERLKTTSTDPV++IDVTKRETYLSS EFR+K G
Sbjct: 885  RIETLTIQEDVKEGEAEDDDGLTTYPYERLKTTSTDPVSDIDVTKRETYLSSEEFRQKFG 944

Query: 191  VTKDAFYKLPKWKQSKMKMALQLF 262
            +TK+AFYKLPKWKQ+K KMALQLF
Sbjct: 945  MTKEAFYKLPKWKQNKHKMALQLF 968


>ref|XP_004148322.1| PREDICTED: villin-4-like [Cucumis sativus]
          Length = 968

 Score =  120 bits (300), Expect = 1e-25
 Identities = 60/84 (71%), Positives = 66/84 (78%)
 Frame = +2

Query: 11   RIEALTIQXXXXXXXXXXXXXLPTYPYERLKTTSTDPVTEIDVTKRETYLSSGEFREKLG 190
            RIE LTIQ             L TYPYERLKTTSTDPV++IDVTKRETYLSS EFR+K G
Sbjct: 885  RIETLTIQEDVKEGEAEDDDGLTTYPYERLKTTSTDPVSDIDVTKRETYLSSEEFRQKFG 944

Query: 191  VTKDAFYKLPKWKQSKMKMALQLF 262
            +TK+AFYKLPKWKQ+K KMALQLF
Sbjct: 945  MTKEAFYKLPKWKQNKHKMALQLF 968


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