BLASTX nr result
ID: Coptis21_contig00017375
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00017375 (687 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002334007.1| predicted protein [Populus trichocarpa] gi|2... 80 5e-13 ref|XP_002276854.2| PREDICTED: uncharacterized protein LOC100264... 75 1e-11 ref|XP_002269710.1| PREDICTED: classical arabinogalactan protein... 75 1e-11 gb|ABK92873.1| unknown [Populus trichocarpa] 75 1e-11 ref|XP_002314400.1| predicted protein [Populus trichocarpa] gi|2... 71 2e-10 >ref|XP_002334007.1| predicted protein [Populus trichocarpa] gi|224132428|ref|XP_002321337.1| predicted protein [Populus trichocarpa] gi|222839526|gb|EEE77863.1| predicted protein [Populus trichocarpa] gi|222862110|gb|EEE99652.1| predicted protein [Populus trichocarpa] Length = 141 Score = 79.7 bits (195), Expect = 5e-13 Identities = 50/111 (45%), Positives = 67/111 (60%), Gaps = 2/111 (1%) Frame = -3 Query: 625 LSSFMAYFLSLFIVLMAFTISPSLSLSTDVELVTSTISAAPAFXXXXXXXXXXXXXXXDI 446 ++SF + FL++F V MA+ SP+L+ V+ STISAAPAF I Sbjct: 1 MASFCSIFLAMFTVFMAYFSSPALTSQIHVQF--STISAAPAFLHDAPSFSPPTLSPD-I 57 Query: 445 TPLFPTPK-GGISPSPSGMPTIPSSLSPPNPDEMVSYGP-DSALPPSALKP 299 PLFPTP G SP+ S +PTIPS+ SPPNPD+M++ GP S++ PS P Sbjct: 58 EPLFPTPGVGAPSPTESSIPTIPSNPSPPNPDDMLAPGPAGSSISPSGSLP 108 >ref|XP_002276854.2| PREDICTED: uncharacterized protein LOC100264897 [Vitis vinifera] Length = 119 Score = 75.1 bits (183), Expect = 1e-11 Identities = 46/93 (49%), Positives = 59/93 (63%), Gaps = 3/93 (3%) Frame = -3 Query: 568 ISPSLSLSTD-VELVTSTISAAPAFXXXXXXXXXXXXXXXDITPLFPTPKGGISPSPSG- 395 +SP LSLS + + L TSTIS +PA I+PLFP+P GG+ P P+G Sbjct: 2 LSPLLSLSPEQLHLQTSTISTSPAVLLNPALSPLPPLSPD-ISPLFPSP-GGVLPVPTGS 59 Query: 394 -MPTIPSSLSPPNPDEMVSYGPDSALPPSALKP 299 MPTIPS+ SPPNPD++V+ GPD A+ PSA P Sbjct: 60 SMPTIPSNPSPPNPDDVVALGPDFAISPSASLP 92 >ref|XP_002269710.1| PREDICTED: classical arabinogalactan protein 26-like [Vitis vinifera] Length = 138 Score = 75.1 bits (183), Expect = 1e-11 Identities = 47/103 (45%), Positives = 60/103 (58%), Gaps = 2/103 (1%) Frame = -3 Query: 613 MAYFLSLFIVLMAF-TISPSLSLSTDVELVTSTISAAPAFXXXXXXXXXXXXXXXDITPL 437 MA SL V M F TI S++ ++L TSTISA+PA+ DITPL Sbjct: 1 MAAIWSLIAVFMVFITIHSSVAFPYQLKLQTSTISASPAYLPNPPLSSPSPSLSPDITPL 60 Query: 436 FPTPKG-GISPSPSGMPTIPSSLSPPNPDEMVSYGPDSALPPS 311 FP+P G +SP+ S +PTIPSS SPPNPD + + P SA P+ Sbjct: 61 FPSPVGVPLSPAESSLPTIPSSPSPPNPDAVATPVPGSASSPA 103 >gb|ABK92873.1| unknown [Populus trichocarpa] Length = 141 Score = 75.1 bits (183), Expect = 1e-11 Identities = 49/111 (44%), Positives = 66/111 (59%), Gaps = 2/111 (1%) Frame = -3 Query: 625 LSSFMAYFLSLFIVLMAFTISPSLSLSTDVELVTSTISAAPAFXXXXXXXXXXXXXXXDI 446 ++S + FL++F VLMA+ SP+L+ V+ STISAAPAF I Sbjct: 1 MASCCSMFLAMFTVLMAYFSSPALTSQIHVQF--STISAAPAFLHDAPSFSPPTLSPD-I 57 Query: 445 TPLFPTPK-GGISPSPSGMPTIPSSLSPPNPDEMVSYGP-DSALPPSALKP 299 PLFPTP G SP+ S + TIPS+ SPPNPD+M++ GP S++ PS P Sbjct: 58 EPLFPTPGVGAPSPTESSITTIPSNPSPPNPDDMLAPGPAGSSISPSGSLP 108 >ref|XP_002314400.1| predicted protein [Populus trichocarpa] gi|222863440|gb|EEF00571.1| predicted protein [Populus trichocarpa] Length = 132 Score = 71.2 bits (173), Expect = 2e-10 Identities = 46/111 (41%), Positives = 59/111 (53%), Gaps = 4/111 (3%) Frame = -3 Query: 613 MAYFLSLFIVLMAFTISPSLSLSTDVELVTST--ISAAPAFXXXXXXXXXXXXXXXDITP 440 MA F ++++ I P LS ST + TS IS +P F DI P Sbjct: 1 MASFCFFIVLIVPLMIFPLLSSSTQLNSKTSPYPISTSPPFLTNPPPPSPLQELSPDIAP 60 Query: 439 LFPTPKGGISPSP--SGMPTIPSSLSPPNPDEMVSYGPDSALPPSALKPVA 293 L P+P GG+ PSP S +PTIPS+ SPPNPDE+V+ GP SA P P + Sbjct: 61 LLPSP-GGVLPSPTVSSVPTIPSTPSPPNPDEVVAPGPASAFSPLGALPAS 110