BLASTX nr result

ID: Coptis21_contig00017368 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017368
         (673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520425.1| laccase, putative [Ricinus communis] gi|2235...   233   2e-59
ref|XP_003539958.1| PREDICTED: laccase-4-like [Glycine max]           227   1e-57
ref|XP_002280416.1| PREDICTED: laccase-4 [Vitis vinifera] gi|297...   227   1e-57
ref|NP_565881.1| laccase-4 [Arabidopsis thaliana] gi|75318640|sp...   227   2e-57
ref|XP_002322961.1| laccase 1a [Populus trichocarpa] gi|22286759...   226   4e-57

>ref|XP_002520425.1| laccase, putative [Ricinus communis] gi|223540267|gb|EEF41838.1|
           laccase, putative [Ricinus communis]
          Length = 556

 Score =  233 bits (595), Expect = 2e-59
 Identities = 101/110 (91%), Positives = 106/110 (96%)
 Frame = -3

Query: 671 QDTGIIAPENHPIHLHGFNFFQVGRGIGNFNPTKDPKNFNLVDPIERNTIGVPSGGWTAI 492
           QDTG+I PENHPIHLHGFNFFQVGRG+GNFNP KDPKNFNLVDP+ERNT GVPSGGWTAI
Sbjct: 447 QDTGMITPENHPIHLHGFNFFQVGRGVGNFNPKKDPKNFNLVDPVERNTAGVPSGGWTAI 506

Query: 491 RFKADNPGVWFMHCHLEVHTTWGLKMAFVVDNGKGPNESILPPPSDLPTC 342
           RF+ADNPGVWFMHCHLEVHTTWGLKMAFVVDNGKGPNES+LPPPSDLP C
Sbjct: 507 RFRADNPGVWFMHCHLEVHTTWGLKMAFVVDNGKGPNESLLPPPSDLPKC 556


>ref|XP_003539958.1| PREDICTED: laccase-4-like [Glycine max]
          Length = 548

 Score =  227 bits (579), Expect = 1e-57
 Identities = 97/110 (88%), Positives = 105/110 (95%)
 Frame = -3

Query: 671 QDTGIIAPENHPIHLHGFNFFQVGRGIGNFNPTKDPKNFNLVDPIERNTIGVPSGGWTAI 492
           QDTG+I PENHPIHLHGFNFF VGRG GNFNPTKDPK FNLVDP+ERNT+GVP+GGWTAI
Sbjct: 439 QDTGMITPENHPIHLHGFNFFVVGRGQGNFNPTKDPKKFNLVDPVERNTVGVPAGGWTAI 498

Query: 491 RFKADNPGVWFMHCHLEVHTTWGLKMAFVVDNGKGPNESILPPPSDLPTC 342
           RF+ADNPGVWFMHCHLE+HTTWGLKMAFVVDNGKGPNES+LPPP+DLP C
Sbjct: 499 RFRADNPGVWFMHCHLEIHTTWGLKMAFVVDNGKGPNESLLPPPTDLPKC 548


>ref|XP_002280416.1| PREDICTED: laccase-4 [Vitis vinifera] gi|297745946|emb|CBI16002.3|
           unnamed protein product [Vitis vinifera]
          Length = 554

 Score =  227 bits (579), Expect = 1e-57
 Identities = 96/110 (87%), Positives = 105/110 (95%)
 Frame = -3

Query: 671 QDTGIIAPENHPIHLHGFNFFQVGRGIGNFNPTKDPKNFNLVDPIERNTIGVPSGGWTAI 492
           QDTG+IAPE HP+HLHGFNFF +GRG+GN+NP KDPK FNLVDP+ERNT+GVPSGGWTAI
Sbjct: 445 QDTGMIAPERHPVHLHGFNFFVIGRGLGNYNPKKDPKKFNLVDPVERNTVGVPSGGWTAI 504

Query: 491 RFKADNPGVWFMHCHLEVHTTWGLKMAFVVDNGKGPNESILPPPSDLPTC 342
           RF+ADNPGVWFMHCHLEVHTTWGLKMAFVVDNGKGPNES+LPPPSDLP C
Sbjct: 505 RFRADNPGVWFMHCHLEVHTTWGLKMAFVVDNGKGPNESVLPPPSDLPKC 554


>ref|NP_565881.1| laccase-4 [Arabidopsis thaliana] gi|75318640|sp|O80434.2|LAC4_ARATH
           RecName: Full=Laccase-4; AltName:
           Full=Benzenediol:oxygen oxidoreductase 4; AltName:
           Full=Diphenol oxidase 4; AltName: Full=Protein IRREGULAR
           XYLEM 12; AltName: Full=Urishiol oxidase 4; Flags:
           Precursor gi|15450603|gb|AAK96573.1| At2g38080/T8P21
           [Arabidopsis thaliana] gi|17380634|gb|AAL36080.1|
           At2g38080/T8P21 [Arabidopsis thaliana]
           gi|17473886|gb|AAL38363.1| putative diphenol oxidase
           [Arabidopsis thaliana] gi|20196985|gb|AAC27158.2|
           putative diphenol oxidase [Arabidopsis thaliana]
           gi|21387103|gb|AAM47955.1| putative diphenol oxidase
           [Arabidopsis thaliana] gi|330254393|gb|AEC09487.1|
           laccase-4 [Arabidopsis thaliana]
          Length = 558

 Score =  227 bits (578), Expect = 2e-57
 Identities = 96/110 (87%), Positives = 105/110 (95%)
 Frame = -3

Query: 671 QDTGIIAPENHPIHLHGFNFFQVGRGIGNFNPTKDPKNFNLVDPIERNTIGVPSGGWTAI 492
           QDTG+IAPENHP+HLHGFNFF+VGRG+GNFN TKDPKNFNLVDP+ERNTIGVPSGGW  I
Sbjct: 449 QDTGVIAPENHPVHLHGFNFFEVGRGLGNFNSTKDPKNFNLVDPVERNTIGVPSGGWVVI 508

Query: 491 RFKADNPGVWFMHCHLEVHTTWGLKMAFVVDNGKGPNESILPPPSDLPTC 342
           RF+ADNPGVWFMHCHLEVHTTWGLKMAF+V+NGKGPN+SILPPP DLP C
Sbjct: 509 RFRADNPGVWFMHCHLEVHTTWGLKMAFLVENGKGPNQSILPPPKDLPKC 558


>ref|XP_002322961.1| laccase 1a [Populus trichocarpa] gi|222867591|gb|EEF04722.1|
           laccase 1a [Populus trichocarpa]
          Length = 557

 Score =  226 bits (575), Expect = 4e-57
 Identities = 97/110 (88%), Positives = 104/110 (94%)
 Frame = -3

Query: 671 QDTGIIAPENHPIHLHGFNFFQVGRGIGNFNPTKDPKNFNLVDPIERNTIGVPSGGWTAI 492
           QDTGII+PENHPIHLHGFNFF VGRG+GN+NP  DPK FNLVDP+ERNTIGVPSGGW AI
Sbjct: 448 QDTGIISPENHPIHLHGFNFFAVGRGVGNYNPKTDPKKFNLVDPVERNTIGVPSGGWVAI 507

Query: 491 RFKADNPGVWFMHCHLEVHTTWGLKMAFVVDNGKGPNESILPPPSDLPTC 342
           RF+ADNPGVWFMHCHLEVHTTWGLKMAF+VDNGKGPNES+LPPPSDLP C
Sbjct: 508 RFRADNPGVWFMHCHLEVHTTWGLKMAFLVDNGKGPNESLLPPPSDLPKC 557


Top