BLASTX nr result

ID: Coptis21_contig00017366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017366
         (1298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270792.1| PREDICTED: uncharacterized protein LOC100261...   210   7e-52
ref|XP_003554726.1| PREDICTED: uncharacterized protein LOC100816...   195   2e-47
ref|XP_003521778.1| PREDICTED: uncharacterized protein LOC100809...   194   5e-47
ref|XP_002521956.1| DNA binding protein, putative [Ricinus commu...   190   6e-46
ref|XP_004139392.1| PREDICTED: uncharacterized protein LOC101221...   187   5e-45

>ref|XP_002270792.1| PREDICTED: uncharacterized protein LOC100261576 [Vitis vinifera]
            gi|296087886|emb|CBI35169.3| unnamed protein product
            [Vitis vinifera]
          Length = 357

 Score =  210 bits (534), Expect = 7e-52
 Identities = 142/358 (39%), Positives = 175/358 (48%), Gaps = 59/358 (16%)
 Frame = -1

Query: 1271 LTSYYHHHHPTTNGMITXXXXXXQHTHVSTPHYTSSEPSTTTLSVKPPTIQLPPSSNPPT 1092
            LTSY+HHH                      PH+ +  P   T +  P    LPPS  PP 
Sbjct: 8    LTSYFHHHQQQPQ-------PPPPPPPQPQPHHQTQNPVAAT-AASPSNGLLPPSERPPL 59

Query: 1091 -------------TETVKKKRGRPRKYAT----------PPPSSAXXXNQLTXXXXXXXX 981
                          ETV++KRGRPRKY T          P  S      +          
Sbjct: 60   GYHHSVPSAVTSPPETVRRKRGRPRKYGTSEQGLSAKKSPSSSVPVPKKKEQGLGGSSKK 119

Query: 980  XXXKNNGNAGQGFTPHIITVATDEDVAQNIMSFVQQRKCAVCILSASGSISNPSLRQPAM 801
                + GNAGQ FTPH+ITVA+ EDVAQ IM F+QQ K  +CI+SASGSISN SLRQPA 
Sbjct: 120  SQLVSLGNAGQSFTPHVITVASGEDVAQKIMFFMQQSKREICIMSASGSISNASLRQPAT 179

Query: 800  LGGNVTYEGCFEIFSLSGSFLHSEVGGASSRTGGLSVCLSSTDXXXXXXXXXGPLTAAGP 621
             GGNV YEG FEI SL+GS++ +E+GG   RTGGLSVCLS+TD         GPL AAGP
Sbjct: 180  SGGNVAYEGRFEILSLTGSYVRTEIGG---RTGGLSVCLSNTDGEIIGGGVGGPLKAAGP 236

Query: 620  VQIVAASFSFDTTKNTSADEKLEASLNKSPP---------------QVAGRPSMTGS--- 495
            VQ++  +F  D+ K+TS   K +AS   + P               + +GR  + G+   
Sbjct: 237  VQVIVGTFLVDSKKDTSTGLKADASPKFTSPVGGASVSNVGFRSAVESSGRIPVMGNDDH 296

Query: 494  -------FMLQPRGMDVTSPHSTDWRGGLGAR-----------DHGVWPSPGDGDDEQ 375
                   FM+Q RGM +     TDWR G  AR             G   SP +GD EQ
Sbjct: 297  QGIGGSHFMIQSRGMQMAPTRPTDWRSGPDARINVGYDLAGRGGRGACQSPENGDYEQ 354


>ref|XP_003554726.1| PREDICTED: uncharacterized protein LOC100816781 [Glycine max]
          Length = 356

 Score =  195 bits (495), Expect = 2e-47
 Identities = 137/359 (38%), Positives = 175/359 (48%), Gaps = 56/359 (15%)
 Frame = -1

Query: 1283 LESVLTSYYHHHHPTTNGMITXXXXXXQHTHVSTPHYTSSEPSTTTLSVKPPTIQLPPSS 1104
            +++ LTS++HHH               QH H   P  T++ P+   L     +  L P S
Sbjct: 4    IDNHLTSFFHHHQQQQQ------HHQHQHQHPPPPPPTTASPTNGLLPNADGSHMLYPHS 57

Query: 1103 NPPTT----ETVKKKRGRPRKYATPPPSSAXXXNQLTXXXXXXXXXXXKNN--------- 963
                     E  K+KRGRPRKY TP  + A      T            +          
Sbjct: 58   VASAVSSQLEPAKRKRGRPRKYGTPEQALAAKKAATTSSQSFSADKKPHSPTFPSSSFTS 117

Query: 962  ---------GNAGQGFTPHIITVATDEDVAQNIMSFVQQRKCAVCILSASGSISNPSLRQ 810
                     GNAGQGFTPH+I+VA  EDV Q IM F+QQ +  +CILSASGSISN SLRQ
Sbjct: 118  SKKSLSFALGNAGQGFTPHVISVAAGEDVGQKIMLFMQQSRREMCILSASGSISNASLRQ 177

Query: 809  PAMLGGNVTYEGCFEIFSLSGSFLHSEVGGASSRTGGLSVCLSSTDXXXXXXXXXGPLTA 630
            PA  GG++TYEG FEI SL+GS++ +E+G   +RTGGLSVCLS+TD         GPL A
Sbjct: 178  PATSGGSITYEGRFEIISLTGSYVRNELG---TRTGGLSVCLSNTDGQIIGGGVGGPLKA 234

Query: 629  AGPVQIVAASFSFDTTKNTSADEKLEASLNKSPPQV----------------AGRP---- 510
            AGPVQ++  +F  D  K+  A  K +AS +K P  V                +G P    
Sbjct: 235  AGPVQVIVGTFFIDNKKDNGAGLKGDASASKLPSPVSEPVSSLGFRQSVDSSSGNPIRGN 294

Query: 509  ----SMTGS-FMLQPRGMDVTSPHSTDWRGG---------LGARDHGVWPSPGDGDDEQ 375
                +M GS FM+Q  G+  T P STDW             G   HG   SP +G  +Q
Sbjct: 295  DEHQAMDGSHFMIQQLGLHGTPPRSTDWGRPDSRNTGFELTGRTGHGAHQSPENGGYDQ 353


>ref|XP_003521778.1| PREDICTED: uncharacterized protein LOC100809675 [Glycine max]
          Length = 346

 Score =  194 bits (492), Expect = 5e-47
 Identities = 136/353 (38%), Positives = 172/353 (48%), Gaps = 51/353 (14%)
 Frame = -1

Query: 1280 ESVLTSYYHHHHPTTNGMITXXXXXXQHTHVSTPHYTSSEPSTTTLSVKPPTIQLPPSSN 1101
            ++ LTS++HHHH               H     P  T++ P+   L     +  L P S 
Sbjct: 5    DNQLTSFFHHHHQQHQ-----------HHQPPPPPQTTASPTNGLLPNADGSHILYPHSV 53

Query: 1100 PPTT----ETVKKKRGRPRKYATPPPSSAXXXNQLTXXXXXXXXXXXKNN---------- 963
                    E  K+KRGRPRKY TP  + A      T            +           
Sbjct: 54   ASAVSSQLEPAKRKRGRPRKYGTPEQALAAKKAATTLSHSFSVDKKPHSPTFPSSKKSHS 113

Query: 962  ---GNAGQGFTPHIITVATDEDVAQNIMSFVQQRKCAVCILSASGSISNPSLRQPAMLGG 792
               GNAGQGFTPH+I+VA  EDV Q IM F+QQ +  +CILSASGSISN SLRQPA  GG
Sbjct: 114  FALGNAGQGFTPHVISVAAGEDVGQKIMLFMQQSRREMCILSASGSISNASLRQPATSGG 173

Query: 791  NVTYEGCFEIFSLSGSFLHSEVGGASSRTGGLSVCLSSTDXXXXXXXXXGPLTAAGPVQI 612
            ++ YEG FEI SL+GS++ +E+G   +RTGGLSVCLS+TD         GPL AAGPVQ+
Sbjct: 174  SIAYEGRFEIISLTGSYVRNELG---TRTGGLSVCLSNTDGQIIGGGVGGPLKAAGPVQV 230

Query: 611  VAASFSFDTTKNTSADEKLEASLNKSPPQV----------------AGRP--------SM 504
            +  +F  D  K+T A  K + S +K P  V                +G P        +M
Sbjct: 231  IVGTFFIDNKKDTGAGVKGDISASKLPSPVGEPVSSLGFRQSVDSPSGNPIRGNDEHQAM 290

Query: 503  TGS-FMLQPRGMDVTSPHSTDWRGG---------LGARDHGVWPSPGDGDDEQ 375
             GS FM+Q  G+  T P STDW             G   HG   SP +G  EQ
Sbjct: 291  GGSHFMIQQLGLHGTPPRSTDWGHPDSRNTGFELTGRIGHGAHQSPENGGYEQ 343


>ref|XP_002521956.1| DNA binding protein, putative [Ricinus communis]
            gi|223538760|gb|EEF40360.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 364

 Score =  190 bits (483), Expect = 6e-46
 Identities = 137/379 (36%), Positives = 176/379 (46%), Gaps = 84/379 (22%)
 Frame = -1

Query: 1256 HHHHPTTNGMITXXXXXXQHTHVSTPHY--TSSEPSTTTLSVKPPTIQLPP--------- 1110
            HHHHP              H H+S+  Y  TS+ P+  T +  P    LPP         
Sbjct: 8    HHHHP--------------HHHLSSSSYFTTSTTPAPATTTPSPTNGLLPPPPHDTGGGG 53

Query: 1109 --------SSNPPTT-------ETVKKKRGRPRKYATPPPSSAXXXNQLTXXXXXXXXXX 975
                    S  P T        E+ ++KRGRPRKY TP  + A      +          
Sbjct: 54   GTHMVYPHSVGPSTAAVSSAPVESPRRKRGRPRKYGTPEQALAAKKTASSSSNAVAARER 113

Query: 974  XKNN---------------------GNAGQGFTPHIITVATDEDVAQNIMSFVQQRKCAV 858
             +                       GNAGQGFTPH+I+V+  EDVAQ IM F+QQ +  +
Sbjct: 114  REAAAASSPSYSGFSSRKSQQLVALGNAGQGFTPHVISVSAGEDVAQKIMLFMQQCRREM 173

Query: 857  CILSASGSISNPSLRQPAMLGGNVTYEGCFEIFSLSGSFLHSEVGGASSRTGGLSVCLSS 678
            CILSASGSISN SLRQPA  GGN+TYEG FEI SLSGS++ +E+GG   R GGLSVCLS+
Sbjct: 174  CILSASGSISNASLRQPATSGGNITYEGRFEIISLSGSYVRTEIGG---RAGGLSVCLSN 230

Query: 677  TDXXXXXXXXXGPLTAAGPVQIVAASFSFDTTKNTSADEKLEASLNK------------- 537
            +D         GPL A GPVQ++  +F  D  K+  +  K++AS +K             
Sbjct: 231  SDGQIIGGGIGGPLIAGGPVQVIIGTFVVDNKKDVGSGGKVDASSSKLPSPGGGASMSNI 290

Query: 536  ---SPPQVAGRPSMTGS----------FMLQPRGMDVTSPHSTDWRGG-----------L 429
               +P   +GR +  G+          FM+ PRGM        DW  G            
Sbjct: 291  GFRTPTDTSGRHTFRGNDDHQTMGGNPFMIPPRGMH-------DWSSGSEARVNATFELT 343

Query: 428  GARDHGVWPSPGDGDDEQH 372
            G R HG   SP +GD EQ+
Sbjct: 344  GRRGHGARQSPENGDYEQY 362


>ref|XP_004139392.1| PREDICTED: uncharacterized protein LOC101221844 [Cucumis sativus]
            gi|449520142|ref|XP_004167093.1| PREDICTED:
            uncharacterized protein LOC101229030 [Cucumis sativus]
          Length = 362

 Score =  187 bits (475), Expect = 5e-45
 Identities = 132/361 (36%), Positives = 176/361 (48%), Gaps = 59/361 (16%)
 Frame = -1

Query: 1280 ESVLTSYYHHH--HPTTNGMITXXXXXXQHTHVSTPHYTSSEPSTTTLSVKPPTIQLPPS 1107
            E+ L+SY+HHH  H  T    +        TH  +    SS+       V P ++     
Sbjct: 5    ENQLSSYFHHHQHHHQTPTTTSPTNGLLPPTHHLSAAAASSDAGPHV--VYPHSVPSAAV 62

Query: 1106 SNPPTTETVKKKRGRPRKYATPPP--------------SSAXXXNQLTXXXXXXXXXXXK 969
            S+ P  E  ++KRGRPRKY TP                SS+    +L             
Sbjct: 63   SSSPL-EPARRKRGRPRKYGTPEEALAAKKAATASSHSSSSKAKKELASSSSLNAVSASS 121

Query: 968  NN------------GNAGQGFTPHIITVATDEDVAQNIMSFVQQRKCAVCILSASGSISN 825
            +             GNAGQGF PH+I VA  EDV Q IM F+QQ K  +CILSASGSISN
Sbjct: 122  SFSTPSKKSQLAALGNAGQGFAPHVINVAAGEDVGQKIMQFMQQCKREICILSASGSISN 181

Query: 824  PSLRQPAMLGGNVTYEGCFEIFSLSGSFLHSEVGGASSRTGGLSVCLSSTDXXXXXXXXX 645
             SLRQPA  GGN+ YEG FEI SL GS++ +++GG   +TGGLSVCLSS +         
Sbjct: 182  ASLRQPAASGGNIAYEGRFEIVSLCGSYVRTDLGG---KTGGLSVCLSSAEGHIIGGGVG 238

Query: 644  GPLTAAGPVQIVAASFSFDTTK--------------------NTSADEKLEASLNKSPPQ 525
            GPL AAGPVQ++  +F  D  K                     + ++ +  ++++    Q
Sbjct: 239  GPLKAAGPVQVIVGTFVIDPKKEFGGGKGDGSAVKLPSPIGGTSMSNLRYGSNIDSGGNQ 298

Query: 524  VAGRPSMTG----SFMLQPRGMDVTSPHSTDWRGGLGARDHGV-------WPSPGDGDDE 378
            + G     G     F+LQPRG+++TSP STDWR GL A +            SP +GD +
Sbjct: 299  IRGNDEHQGLGESHFLLQPRGVNLTSPRSTDWRTGLDATNTAYDLSGRTGHHSPENGDYD 358

Query: 377  Q 375
            Q
Sbjct: 359  Q 359


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