BLASTX nr result

ID: Coptis21_contig00017323 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017323
         (1203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313168.1| predicted protein [Populus trichocarpa] gi|2...   275   2e-71
ref|XP_002298767.1| predicted protein [Populus trichocarpa] gi|2...   272   1e-70
ref|XP_002263780.1| PREDICTED: PXMP2/4 family protein 4 [Vitis v...   271   2e-70
ref|XP_002867146.1| hypothetical protein ARALYDRAFT_491288 [Arab...   267   3e-69
ref|XP_002527492.1| Protein SYM1, putative [Ricinus communis] gi...   267   5e-69

>ref|XP_002313168.1| predicted protein [Populus trichocarpa] gi|222849576|gb|EEE87123.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score =  275 bits (702), Expect = 2e-71
 Identities = 125/172 (72%), Positives = 150/172 (87%)
 Frame = -2

Query: 959 GFVGWYLGMIKSHPVLTKSVTSASIYTAADFTSQRLTVTSSESYDLYRTLRMTGYGLLIA 780
           GFVGWYLGM+KS PVLTKS TS+ IY AAD +SQ +++ SSE+YDL R LRM GYGLLI 
Sbjct: 13  GFVGWYLGMVKSRPVLTKSATSSLIYIAADLSSQTMSLPSSEAYDLVRILRMAGYGLLII 72

Query: 779 GPAMHIWFNSMSKVLPKRDVLTTLKKIFVGQALYGPIMTAVFFSSNAGLQGENGIEIVAR 600
           GP++H WFN +SK+ PKRD++TT KKI +GQ +YGPIMT VFFSSNA LQGEN  EI+AR
Sbjct: 73  GPSLHFWFNFVSKLFPKRDLITTFKKIIMGQTIYGPIMTVVFFSSNACLQGENSAEIIAR 132

Query: 599 LRRDLLPTLINGLLYWPVCDFITFKFIPVPLQPLISNSFAYLWTIYITYMAS 444
           L+RDLLPT+ING++YWPVCDF+TFKFIPV LQPL+SNSF+YLWT+Y+TYMAS
Sbjct: 133 LKRDLLPTMINGVMYWPVCDFVTFKFIPVHLQPLVSNSFSYLWTVYMTYMAS 184


>ref|XP_002298767.1| predicted protein [Populus trichocarpa] gi|222846025|gb|EEE83572.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score =  272 bits (695), Expect = 1e-70
 Identities = 122/172 (70%), Positives = 149/172 (86%)
 Frame = -2

Query: 959 GFVGWYLGMIKSHPVLTKSVTSASIYTAADFTSQRLTVTSSESYDLYRTLRMTGYGLLIA 780
           GF+GWYLGM+KS P+LTKS TS+ IY AAD +SQ +++ SSE YDL RTLRM GYGLLI 
Sbjct: 13  GFIGWYLGMVKSRPILTKSATSSLIYIAADLSSQTISLPSSEPYDLVRTLRMAGYGLLIV 72

Query: 779 GPAMHIWFNSMSKVLPKRDVLTTLKKIFVGQALYGPIMTAVFFSSNAGLQGENGIEIVAR 600
           GP++H WF  +SK+LPKRD++TT KKI +GQ +YGPIMT VFFS NA LQGEN  EI+AR
Sbjct: 73  GPSLHFWFKFVSKLLPKRDLITTFKKILMGQTIYGPIMTVVFFSLNARLQGENSAEIIAR 132

Query: 599 LRRDLLPTLINGLLYWPVCDFITFKFIPVPLQPLISNSFAYLWTIYITYMAS 444
           L+RDL+PT+ING++YWPVCDF+TFKFIPV LQPL+SNSF+YLWT+Y+TYMAS
Sbjct: 133 LKRDLVPTMINGVMYWPVCDFVTFKFIPVHLQPLVSNSFSYLWTVYMTYMAS 184


>ref|XP_002263780.1| PREDICTED: PXMP2/4 family protein 4 [Vitis vinifera]
           gi|296083072|emb|CBI22476.3| unnamed protein product
           [Vitis vinifera]
          Length = 250

 Score =  271 bits (693), Expect = 2e-70
 Identities = 122/177 (68%), Positives = 153/177 (86%)
 Frame = -2

Query: 959 GFVGWYLGMIKSHPVLTKSVTSASIYTAADFTSQRLTVTSSESYDLYRTLRMTGYGLLIA 780
           GFV WYLG+++S P+LTKSVTS+ IY AAD TSQ ++  S+E YD  RTLRM GYG+LI 
Sbjct: 72  GFVAWYLGLVQSRPLLTKSVTSSLIYAAADCTSQTISRQSTEPYDFMRTLRMAGYGMLIL 131

Query: 779 GPAMHIWFNSMSKVLPKRDVLTTLKKIFVGQALYGPIMTAVFFSSNAGLQGENGIEIVAR 600
           GP++H WFN MSKVLP+RD++TTLKKI +GQ  +GP MTA+FFS+NA +QGENG +I+AR
Sbjct: 132 GPSLHFWFNFMSKVLPQRDLITTLKKICLGQTTFGPFMTAIFFSANAAVQGENGSDIIAR 191

Query: 599 LRRDLLPTLINGLLYWPVCDFITFKFIPVPLQPLISNSFAYLWTIYITYMASLKKVD 429
           L RDL+PTLING++YWP+CDF+TFKFIPV LQPL+SNSF+YLWTIY+TYMASL++ D
Sbjct: 192 LNRDLIPTLINGVMYWPLCDFVTFKFIPVHLQPLVSNSFSYLWTIYMTYMASLERAD 248


>ref|XP_002867146.1| hypothetical protein ARALYDRAFT_491288 [Arabidopsis lyrata subsp.
           lyrata] gi|297312982|gb|EFH43405.1| hypothetical protein
           ARALYDRAFT_491288 [Arabidopsis lyrata subsp. lyrata]
          Length = 259

 Score =  267 bits (683), Expect = 3e-69
 Identities = 124/175 (70%), Positives = 145/175 (82%)
 Frame = -2

Query: 959 GFVGWYLGMIKSHPVLTKSVTSASIYTAADFTSQRLTVTSSESYDLYRTLRMTGYGLLIA 780
           GF+GWYLGM+KS PVLTKSVTS+ IY AAD +SQ +   S ESYDL RT RM GYGLLI 
Sbjct: 79  GFIGWYLGMVKSRPVLTKSVTSSLIYIAADLSSQTIPQASVESYDLVRTARMAGYGLLIL 138

Query: 779 GPAMHIWFNSMSKVLPKRDVLTTLKKIFVGQALYGPIMTAVFFSSNAGLQGENGIEIVAR 600
           GP +H WFN MS++ PKRD++TT KK+ +GQ +YGP M  VFFS NA LQGENG EIVAR
Sbjct: 139 GPTLHYWFNLMSRLFPKRDLITTFKKMAMGQTVYGPAMNVVFFSLNAALQGENGSEIVAR 198

Query: 599 LRRDLLPTLINGLLYWPVCDFITFKFIPVPLQPLISNSFAYLWTIYITYMASLKK 435
           L+RDLLPT++NG++YWP+CDFITFKF PV LQPL+SNSF+YLWTIYITYMAS  K
Sbjct: 199 LKRDLLPTMLNGVMYWPLCDFITFKFFPVHLQPLVSNSFSYLWTIYITYMASRAK 253


>ref|XP_002527492.1| Protein SYM1, putative [Ricinus communis] gi|223533132|gb|EEF34890.1|
            Protein SYM1, putative [Ricinus communis]
          Length = 268

 Score =  267 bits (682), Expect = 5e-69
 Identities = 138/264 (52%), Positives = 177/264 (67%), Gaps = 11/264 (4%)
 Frame = -2

Query: 1187 GGLVKRALFKRSSILDYLNVSNETSSI--VLCKQQYTRSF-------YSKFPLLFRKFKD 1035
            G  + R L +R +I   ++ S   ++I  +L  Q+ T +        + K P  FRK +D
Sbjct: 2    GSSIHRLLRRRITITGGISPSEPITTINSMLRHQKITTNTIIANSRTFLKLPYFFRKSRD 61

Query: 1034 --TAIXXXXXXXXXXXXXXXXSWIVENGFVGWYLGMIKSHPVLTKSVTSASIYTAADFTS 861
                                 S  +   FVGWYLGM+K+ P+LTKS T A IY AAD +S
Sbjct: 62   FSNGFSSSPSFFTSPFSSASQSSSITASFVGWYLGMVKTRPILTKSATCAVIYVAADLSS 121

Query: 860  QRLTVTSSESYDLYRTLRMTGYGLLIAGPAMHIWFNSMSKVLPKRDVLTTLKKIFVGQAL 681
            Q +    SE YDL RTLRM GYG+L+ GP +H WFN +S+  PKRD++TT KKI +GQ +
Sbjct: 122  QTIARPVSEPYDLVRTLRMAGYGMLVLGPTLHFWFNFVSRQFPKRDLITTFKKIILGQTV 181

Query: 680  YGPIMTAVFFSSNAGLQGENGIEIVARLRRDLLPTLINGLLYWPVCDFITFKFIPVPLQP 501
            YGP MTA+FFS NA LQGENG EIVARL+RDLLPT++NG++YWP+CDFITFKFIPV LQP
Sbjct: 182  YGPAMTALFFSLNACLQGENGSEIVARLKRDLLPTMMNGVMYWPICDFITFKFIPVHLQP 241

Query: 500  LISNSFAYLWTIYITYMASLKKVD 429
            L+SNSF+YLWT+Y+TYMAS +KVD
Sbjct: 242  LVSNSFSYLWTVYMTYMASREKVD 265


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