BLASTX nr result

ID: Coptis21_contig00017319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017319
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298342.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
ref|XP_002283174.1| PREDICTED: uncharacterized protein LOC100248...    82   4e-14
ref|XP_004143129.1| PREDICTED: uncharacterized protein LOC101205...    71   1e-10
ref|XP_002520535.1| conserved hypothetical protein [Ricinus comm...    69   4e-10
ref|XP_002879205.1| hypothetical protein ARALYDRAFT_901879 [Arab...    67   2e-09

>ref|XP_002298342.1| predicted protein [Populus trichocarpa] gi|222845600|gb|EEE83147.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/85 (47%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
 Frame = -2

Query: 482 LYSHKTKLTKFPPQKTSQKVWRVSVGTEDVLPLES-PIETTQEVISANSGDGVSNIISVL 306
           L S +T L K    + S ++W++    E+VLP ++ P+E+TQ+++S  + DGV  IIS L
Sbjct: 73  LPSKRTVLYKQEIHRRSTQIWKIKATPEEVLPSDTTPLESTQQMLSTTNDDGVGTIISAL 132

Query: 305 LFIAFLGLSILTVGVVYIAVTDFLQ 231
           LF+AF  LSILT+G++Y+ VTDFLQ
Sbjct: 133 LFVAFAALSILTIGIIYLGVTDFLQ 157


>ref|XP_002283174.1| PREDICTED: uncharacterized protein LOC100248460 [Vitis vinifera]
           gi|297746039|emb|CBI16095.3| unnamed protein product
           [Vitis vinifera]
          Length = 175

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 41/73 (56%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
 Frame = -2

Query: 446 PQKTSQKVWRVSVGTEDVLPLE-SPIETTQEVISANSGDGVSNIISVLLFIAFLGLSILT 270
           PQK++Q +WR+S  +ED LP E +P+E +Q+++S  S +GVS +IS LLF+AF+ L+ILT
Sbjct: 62  PQKSTQ-LWRISAVSEDALPSEVTPLENSQQIVST-SDEGVSTVISALLFVAFVALTILT 119

Query: 269 VGVVYIAVTDFLQ 231
           +GV+YIAV+DFLQ
Sbjct: 120 IGVIYIAVSDFLQ 132


>ref|XP_004143129.1| PREDICTED: uncharacterized protein LOC101205908 [Cucumis sativus]
           gi|449496669|ref|XP_004160194.1| PREDICTED:
           uncharacterized protein LOC101223634 [Cucumis sativus]
          Length = 176

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 42/92 (45%), Positives = 57/92 (61%), Gaps = 8/92 (8%)
 Frame = -2

Query: 482 LYSHKTKLTKFPPQKTSQKVWRVS----VGTEDVLPLESPI----ETTQEVISANSGDGV 327
           L+S  T     P ++  QK   +S      ++  LP +S      E +QE++ + + DGV
Sbjct: 38  LFSRPTLPLLNPLRQNRQKQLSISRIHAATSQQTLPSDSAALLAAEKSQEIVGSTNDDGV 97

Query: 326 SNIISVLLFIAFLGLSILTVGVVYIAVTDFLQ 231
           S IISVLLF AF+GLSILT+GV+YI VTDFLQ
Sbjct: 98  STIISVLLFTAFIGLSILTIGVIYIGVTDFLQ 129


>ref|XP_002520535.1| conserved hypothetical protein [Ricinus communis]
           gi|223540377|gb|EEF41948.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 168

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 39/103 (37%), Positives = 55/103 (53%)
 Frame = -2

Query: 428 KVWRVSVGTEDVLPLESPIETTQEVISANSGDGVSNIISVLLFIAFLGLSILTVGVVYIA 249
           ++WR+    E+ LP ++    + + I+A S D  +NIIS+LLFIAF+ L+ILTVGV+Y+ 
Sbjct: 56  QIWRLYAAPEEALPSDTAALESAQKIAATSDDPTANIISLLLFIAFVVLAILTVGVIYLG 115

Query: 248 VTDFLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPKGFGQK 120
           VTDFL                              GP+GFGQK
Sbjct: 116 VTDFLGKREKEKFEKEEAAKKKKKGGKKGKVRARTGPRGFGQK 158


>ref|XP_002879205.1| hypothetical protein ARALYDRAFT_901879 [Arabidopsis lyrata subsp.
           lyrata] gi|297325044|gb|EFH55464.1| hypothetical protein
           ARALYDRAFT_901879 [Arabidopsis lyrata subsp. lyrata]
          Length = 167

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 39/108 (36%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
 Frame = -2

Query: 440 KTSQKVWRVSVGTEDVLP-LESPIETTQEVISANSGDGVSNIISVLLFIAFLGLSILTVG 264
           K   ++WRVS   E++   + S   +++ ++S+   DGV+ II VLLF+AFL L++LT+G
Sbjct: 49  KEKTQLWRVSATPEEISQEIVSSDSSSEAIVSSGGQDGVALIIQVLLFVAFLALTVLTIG 108

Query: 263 VVYIAVTDFLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPKGFGQK 120
           VVYI VT+FL                              GP+GFGQK
Sbjct: 109 VVYIGVTEFLGKREREKFEKDEAAKKSKKGGKKKAMRAKAGPRGFGQK 156


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