BLASTX nr result

ID: Coptis21_contig00017302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017302
         (1612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37208.3| unnamed protein product [Vitis vinifera]              149   2e-33
ref|XP_002268946.1| PREDICTED: uncharacterized protein LOC100258...   149   2e-33
ref|NP_194598.1| uncharacterized protein [Arabidopsis thaliana] ...   142   2e-31
emb|CAA22983.1| hypothetical protein [Arabidopsis thaliana] gi|7...   142   2e-31
ref|NP_179621.1| RPM1 interacting protein 13 [Arabidopsis thalia...   141   4e-31

>emb|CBI37208.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score =  149 bits (377), Expect = 2e-33
 Identities = 63/130 (48%), Positives = 88/130 (67%), Gaps = 2/130 (1%)
 Frame = +2

Query: 452 ELVIVAEKGQVACRDYPHPRHLCARFPFNTNAHEKHCDLCHCYVCDTRAPCVYWGTGGSG 631
           +L++V EKGQ+ACRDYPH R  CA+FPFN+  H++HCD CHCYVCD+ APC +WGTG + 
Sbjct: 95  DLLVVGEKGQIACRDYPHSRDQCAKFPFNSTTHDRHCDQCHCYVCDSLAPCGHWGTGMNI 154

Query: 632 GDHCHSTDKEKTWREQRECFKQGKMAQIPASKHHETTPSVAPTTHPTLTHSEPLNSGNVS 811
            DHCH+T+K++ W +QR+ F+ GK  Q+P  KH    P V+  +   L    P+    VS
Sbjct: 155 VDHCHATNKDEFWVDQRKSFRLGKSQQVPIQKHATALPQVSQNSSFPLLQPNPIWQNQVS 214

Query: 812 --THTNSCSN 835
             T  ++CS+
Sbjct: 215 RPTSIHACSS 224


>ref|XP_002268946.1| PREDICTED: uncharacterized protein LOC100258397 [Vitis vinifera]
          Length = 511

 Score =  149 bits (377), Expect = 2e-33
 Identities = 63/130 (48%), Positives = 88/130 (67%), Gaps = 2/130 (1%)
 Frame = +2

Query: 452 ELVIVAEKGQVACRDYPHPRHLCARFPFNTNAHEKHCDLCHCYVCDTRAPCVYWGTGGSG 631
           +L++V EKGQ+ACRDYPH R  CA+FPFN+  H++HCD CHCYVCD+ APC +WGTG + 
Sbjct: 95  DLLVVGEKGQIACRDYPHSRDQCAKFPFNSTTHDRHCDQCHCYVCDSLAPCGHWGTGMNI 154

Query: 632 GDHCHSTDKEKTWREQRECFKQGKMAQIPASKHHETTPSVAPTTHPTLTHSEPLNSGNVS 811
            DHCH+T+K++ W +QR+ F+ GK  Q+P  KH    P V+  +   L    P+    VS
Sbjct: 155 VDHCHATNKDEFWVDQRKSFRLGKSQQVPIQKHATALPQVSQNSSFPLLQPNPIWQNQVS 214

Query: 812 --THTNSCSN 835
             T  ++CS+
Sbjct: 215 RPTSIHACSS 224


>ref|NP_194598.1| uncharacterized protein [Arabidopsis thaliana]
           gi|115311409|gb|ABI93885.1| At4g28690 [Arabidopsis
           thaliana] gi|332660126|gb|AEE85526.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 448

 Score =  142 bits (359), Expect = 2e-31
 Identities = 55/92 (59%), Positives = 71/92 (77%), Gaps = 1/92 (1%)
 Frame = +2

Query: 455 LVIVAEKGQVACRDYPHPRHLCARFPFNTNAHEKHCDLCHCYVCDTRAPCVYWGTGG-SG 631
           +++V +KG+VACRD+PHPRH CA++PF +  H+  C++CHCYVCDTRAPC YW +GG S 
Sbjct: 81  VLVVGQKGEVACRDFPHPRHACAKYPFKSTLHQTFCEMCHCYVCDTRAPCTYWFSGGISN 140

Query: 632 GDHCHSTDKEKTWREQRECFKQGKMAQIPASK 727
            DHCH+ DKEKTW +QREC + G M   P SK
Sbjct: 141 TDHCHANDKEKTWNDQRECIRTGNMLPRPVSK 172


>emb|CAA22983.1| hypothetical protein [Arabidopsis thaliana]
           gi|7269724|emb|CAB81457.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 419

 Score =  142 bits (359), Expect = 2e-31
 Identities = 55/92 (59%), Positives = 71/92 (77%), Gaps = 1/92 (1%)
 Frame = +2

Query: 455 LVIVAEKGQVACRDYPHPRHLCARFPFNTNAHEKHCDLCHCYVCDTRAPCVYWGTGG-SG 631
           +++V +KG+VACRD+PHPRH CA++PF +  H+  C++CHCYVCDTRAPC YW +GG S 
Sbjct: 52  VLVVGQKGEVACRDFPHPRHACAKYPFKSTLHQTFCEMCHCYVCDTRAPCTYWFSGGISN 111

Query: 632 GDHCHSTDKEKTWREQRECFKQGKMAQIPASK 727
            DHCH+ DKEKTW +QREC + G M   P SK
Sbjct: 112 TDHCHANDKEKTWNDQRECIRTGNMLPRPVSK 143


>ref|NP_179621.1| RPM1 interacting protein 13 [Arabidopsis thaliana]
           gi|4512704|gb|AAD21757.1| hypothetical protein
           [Arabidopsis thaliana] gi|193788744|gb|ACF20471.1|
           At2g20310 [Arabidopsis thaliana]
           gi|330251898|gb|AEC06992.1| RPM1 interacting protein 13
           [Arabidopsis thaliana]
          Length = 430

 Score =  141 bits (356), Expect = 4e-31
 Identities = 58/108 (53%), Positives = 77/108 (71%)
 Frame = +2

Query: 452 ELVIVAEKGQVACRDYPHPRHLCARFPFNTNAHEKHCDLCHCYVCDTRAPCVYWGTGGSG 631
           ++++V +KG++ACRD+PHPRH CA++ FN+ +HEK+CD+CHCYVCD RAPC YW    S 
Sbjct: 101 DVLVVGQKGEIACRDFPHPRHSCAKYAFNSTSHEKYCDMCHCYVCDIRAPCPYWCIAVSS 160

Query: 632 GDHCHSTDKEKTWREQRECFKQGKMAQIPASKHHETTPSVAPTTHPTL 775
            DHCH+ DKEK W+ QRE F+ G M   P+SK    TPS+      TL
Sbjct: 161 IDHCHANDKEKIWKNQREYFRTGYMPTAPSSK---PTPSILRVPKNTL 205