BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017283
         (727 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containi...   371   e-101
ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containi...   309   3e-82
tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea m...   304   1e-80
gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japo...   302   4e-80
ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containi...   283   2e-74

>ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 640

 Score =  371 bits (952), Expect = e-101
 Identities = 174/239 (72%), Positives = 211/239 (88%)
 Frame = -1

Query: 724 ARQLFDMSSERDLVSWSSMIAGYAKSRQSNEALILFHDMQSANVRPDRVTMVSVLSACGD 545
           A++LFD + ERDL+SWSSMIA YAK+RQSNEAL LFH+MQ ANV PD+VTMVSVLSACGD
Sbjct: 221 AKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGD 280

Query: 544 LGALGMGKIVHGYIDRNKVEIDVKLGTSLVDMYAKCGDIENSLKVFNGMGVKDVFTWSAV 365
           +GALGMGK++H  I+RN++EID+KLGTSLVDMYAKCGDI+NSL+VFNGM  +DVF WSA+
Sbjct: 281 VGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAM 340

Query: 364 IIGLANHGFGEHALDYFAKMISGGIKPNDITFIGVLSACSHVGLVDRGWTYFTSMNDKYG 185
           I+GLANHGFGE ALD+F+KMIS  IKPND+TFIGVLSACSH+GLVD GWTYFTSM+  Y 
Sbjct: 341 IMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYD 400

Query: 184 VTPKIEHYGCMVDLLGRTGCVKEALELIKGMPMMPNAAIWGALLSACRVHGHLELAEHA 8
           V+PKIEHYGC+VD+LGR G ++EA+ELIK MP  P+A +W ALL ACR++ ++E+AE A
Sbjct: 401 VSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEA 459



 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 70/299 (23%), Positives = 120/299 (40%), Gaps = 63/299 (21%)
 Frame = -1

Query: 724 ARQLFDMSSERDLVSWSSMIAGYAKSRQSNEALILFHDMQSANVRP-DRVTMVSVLSACG 548
           AR +FD     D   W++MI  Y  S+   E++ LF  M+     P D  ++  V+ ACG
Sbjct: 57  ARSVFDEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACG 116

Query: 547 DLGALGMGKIVHGYIDRNKVEIDVKLGTSLVDMYAKCGDIENSLKV-------------- 410
            L   G G+ +H  + +  +  D+ + T+L++MYAK GDIE +  +              
Sbjct: 117 RLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNV 176

Query: 409 -----------------FNGMGVKDVFTWSAVIIGLANHG-------------------- 341
                            F+ M  +D+ +W+ +I G A+ G                    
Sbjct: 177 LLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISW 236

Query: 340 -----------FGEHALDYFAKMISGGIKPNDITFIGVLSACSHVGLVDRGWTYFTSMND 194
                          AL  F +M    + P+ +T + VLSAC  VG +  G      + +
Sbjct: 237 SSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECI-E 295

Query: 193 KYGVTPKIEHYGCMVDLLGRTGCVKEALELIKGMPMMPNAAIWGALLSACRVHGHLELA 17
           +  +   ++    +VD+  + G +  +L +  GM    +   W A++     HG  ELA
Sbjct: 296 RNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNR-DVFAWSAMIMGLANHGFGELA 353


>ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Brachypodium distachyon]
          Length = 585

 Score =  309 bits (792), Expect = 3e-82
 Identities = 148/241 (61%), Positives = 192/241 (79%)
 Frame = -1

Query: 727 IARQLFDMSSERDLVSWSSMIAGYAKSRQSNEALILFHDMQSANVRPDRVTMVSVLSACG 548
           +AR++FD + +RD  SWSSMI+ YAK R S EAL L+ +M+ A V PD ++MVSVLSAC 
Sbjct: 165 MAREIFDGTRDRDAFSWSSMISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACS 224

Query: 547 DLGALGMGKIVHGYIDRNKVEIDVKLGTSLVDMYAKCGDIENSLKVFNGMGVKDVFTWSA 368
            +GAL +G  VH +++ N+VE+D+KLGT+LVDMYAKCGDIENSLKVF+ M VKDV TWS+
Sbjct: 225 AMGALAIGAEVHRFVESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSS 284

Query: 367 VIIGLANHGFGEHALDYFAKMISGGIKPNDITFIGVLSACSHVGLVDRGWTYFTSMNDKY 188
           +IIGLANHG G  AL  F++MIS G++PN+ITFIGVL AC+HVGLV+ G  YF+SM+D +
Sbjct: 285 MIIGLANHGLGHDALSLFSEMISQGLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVH 344

Query: 187 GVTPKIEHYGCMVDLLGRTGCVKEALELIKGMPMMPNAAIWGALLSACRVHGHLELAEHA 8
           GV P++EHYGCMVDLLGR G V+EA+ELI+ M   P+  IW  LL ACR+H ++E+AE A
Sbjct: 345 GVVPRMEHYGCMVDLLGRAGHVEEAMELIRSMTFKPDPIIWRTLLGACRIHKNVEIAEEA 404

Query: 7   V 5
           +
Sbjct: 405 M 405



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 51/232 (21%), Positives = 99/232 (42%)
 Frame = -1

Query: 727 IARQLFDMSSERDLVSWSSMIAGYAKSRQSNEALILFHDMQSANVRPDRVTMVSVLSACG 548
           +AR  FD +  RD+   + M+A Y    +  EA  +F  M   ++               
Sbjct: 103 LARAAFDEAPRRDVFLCNVMLAAYVARGEVAEARKVFDGMSGRDL--------------- 147

Query: 547 DLGALGMGKIVHGYIDRNKVEIDVKLGTSLVDMYAKCGDIENSLKVFNGMGVKDVFTWSA 368
               +    ++HGY  R                    GD+  + ++F+G   +D F+WS+
Sbjct: 148 ----VSWNTMIHGYAVR--------------------GDVGMAREIFDGTRDRDAFSWSS 183

Query: 367 VIIGLANHGFGEHALDYFAKMISGGIKPNDITFIGVLSACSHVGLVDRGWTYFTSMNDKY 188
           +I   A     + AL+ + +M   G+ P+ I+ + VLSACS +G +  G      + +  
Sbjct: 184 MISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEVHRFV-ESN 242

Query: 187 GVTPKIEHYGCMVDLLGRTGCVKEALELIKGMPMMPNAAIWGALLSACRVHG 32
            V   ++    +VD+  + G ++ +L++   MP + +   W +++     HG
Sbjct: 243 RVEVDMKLGTALVDMYAKCGDIENSLKVFHAMP-VKDVLTWSSMIIGLANHG 293


>tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
          Length = 575

 Score =  304 bits (778), Expect = 1e-80
 Identities = 141/241 (58%), Positives = 194/241 (80%)
 Frame = -1

Query: 727 IARQLFDMSSERDLVSWSSMIAGYAKSRQSNEALILFHDMQSANVRPDRVTMVSVLSACG 548
           +AR++F+   +RD  SWSSM++ Y K R+S +AL L+ +M++A V PD  TMVSVLSAC 
Sbjct: 155 LAREVFNGMDDRDAFSWSSMMSAYTKGRRSKDALELWREMRAACVNPDCTTMVSVLSACS 214

Query: 547 DLGALGMGKIVHGYIDRNKVEIDVKLGTSLVDMYAKCGDIENSLKVFNGMGVKDVFTWSA 368
           D+GAL +G  VH +++ N VE+DVKLGT+L+DMYAKCGDIENS++VF+ M VKDV TWS+
Sbjct: 215 DMGALAVGAEVHQFVESNGVELDVKLGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSS 274

Query: 367 VIIGLANHGFGEHALDYFAKMISGGIKPNDITFIGVLSACSHVGLVDRGWTYFTSMNDKY 188
           +IIGLANHGFG  AL  F++M+S G++PN++TFIGVL +C+H+GLV  G  YF+SM+  +
Sbjct: 275 MIIGLANHGFGHDALSLFSRMLSEGLQPNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVH 334

Query: 187 GVTPKIEHYGCMVDLLGRTGCVKEALELIKGMPMMPNAAIWGALLSACRVHGHLELAEHA 8
           GVTPK++HYGCMVDLLGR+G ++EA +LI+ MP  P+A IW ALL ACR++ ++E+AE A
Sbjct: 335 GVTPKVQHYGCMVDLLGRSGHIEEAKQLIRDMPFEPDAVIWRALLGACRIYKNVEVAEEA 394

Query: 7   V 5
           +
Sbjct: 395 M 395



 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 50/231 (21%), Positives = 112/231 (48%)
 Frame = -1

Query: 724 ARQLFDMSSERDLVSWSSMIAGYAKSRQSNEALILFHDMQSANVRPDRVTMVSVLSACGD 545
           AR L    +  DL   ++++  YAK+ +++ A   F +    +V    V + + ++  G+
Sbjct: 63  ARALKSGFAAADLFVRTALVEAYAKAGRADLARAAFDEAPRRDVFLCNVMLAAYVTR-GE 121

Query: 544 LGALGMGKIVHGYIDRNKVEIDVKLGTSLVDMYAKCGDIENSLKVFNGMGVKDVFTWSAV 365
           +      ++  G  +R+ V  +     +++  YA  G+++ + +VFNGM  +D F+WS++
Sbjct: 122 VAEAR--RVFDGMRERDMVSWN-----TMIHGYAVNGEVDLAREVFNGMDDRDAFSWSSM 174

Query: 364 IIGLANHGFGEHALDYFAKMISGGIKPNDITFIGVLSACSHVGLVDRGWTYFTSMNDKYG 185
           +         + AL+ + +M +  + P+  T + VLSACS +G +  G        +  G
Sbjct: 175 MSAYTKGRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMGALAVG-AEVHQFVESNG 233

Query: 184 VTPKIEHYGCMVDLLGRTGCVKEALELIKGMPMMPNAAIWGALLSACRVHG 32
           V   ++    ++D+  + G ++ ++ +   MP + +   W +++     HG
Sbjct: 234 VELDVKLGTALIDMYAKCGDIENSVRVFHSMP-VKDVLTWSSMIIGLANHG 283


>gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
          Length = 492

 Score =  302 bits (774), Expect = 4e-80
 Identities = 140/241 (58%), Positives = 191/241 (79%)
 Frame = -1

Query: 727 IARQLFDMSSERDLVSWSSMIAGYAKSRQSNEALILFHDMQSANVRPDRVTMVSVLSACG 548
           +AR++FD + +RD  SWSSMI+ YAKSR+S EAL L+ +M +A++ PD +T+VSV+SAC 
Sbjct: 72  LAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACS 131

Query: 547 DLGALGMGKIVHGYIDRNKVEIDVKLGTSLVDMYAKCGDIENSLKVFNGMGVKDVFTWSA 368
           DLGAL +G  VH +++ N++E+D+KLGT+L+DMYAKCGDIE++ +VF+ M  KDV TWS+
Sbjct: 132 DLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSS 191

Query: 367 VIIGLANHGFGEHALDYFAKMISGGIKPNDITFIGVLSACSHVGLVDRGWTYFTSMNDKY 188
           +IIGLANHG G  +L  F+KMIS G+KPN +TF+GVL AC+HVGLV  G  YF SMN+ +
Sbjct: 192 MIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVH 251

Query: 187 GVTPKIEHYGCMVDLLGRTGCVKEALELIKGMPMMPNAAIWGALLSACRVHGHLELAEHA 8
           G+ P +EHYGCMVDLLGR+G V+EA +LI+ M   P+  IW ALL ACR+H ++E+AE A
Sbjct: 252 GIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLGACRIHKNVEIAEEA 311

Query: 7   V 5
           +
Sbjct: 312 M 312


>ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
            [Vitis vinifera]
          Length = 698

 Score =  283 bits (725), Expect = 2e-74
 Identities = 128/241 (53%), Positives = 184/241 (76%)
 Frame = -1

Query: 724  ARQLFDMSSERDLVSWSSMIAGYAKSRQSNEALILFHDMQSANVRPDRVTMVSVLSACGD 545
            AR+LFD    RD+V+WS+MI+GY+++ +  EAL LFH+MQ AN+ P+ +TMVS+LS+C  
Sbjct: 279  ARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAV 338

Query: 544  LGALGMGKIVHGYIDRNKVEIDVKLGTSLVDMYAKCGDIENSLKVFNGMGVKDVFTWSAV 365
            LGAL  GK VH +I + ++++ V LGT+L+D YAKCG +E+S++VF  M VK+V +W+ +
Sbjct: 339  LGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVL 398

Query: 364  IIGLANHGFGEHALDYFAKMISGGIKPNDITFIGVLSACSHVGLVDRGWTYFTSMNDKYG 185
            I GLA++G G+ AL+YF  M+   ++PND+TFIGVLSACSH GLVD G   F SM+  +G
Sbjct: 399  IQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFG 458

Query: 184  VTPKIEHYGCMVDLLGRTGCVKEALELIKGMPMMPNAAIWGALLSACRVHGHLELAEHAV 5
            + P+IEHYGCMVD+LGR G ++EA + IK MP+ PNA IW  LL++C+VH ++E+ E ++
Sbjct: 459  IEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESL 518

Query: 4    K 2
            K
Sbjct: 519  K 519



 Score =  157 bits (397), Expect = 2e-36
 Identities = 84/233 (36%), Positives = 138/233 (59%), Gaps = 1/233 (0%)
 Frame = -1

Query: 727 IARQLFDMSSERDLVSWSSMIAGYAKSRQSNEALILFHDMQSANVRPDRVTMVSVLSACG 548
           +AR++FD  SER++ +W+SM AGY KS    E + LFH+M   ++R D VT+VSVL+ACG
Sbjct: 177 VARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACG 236

Query: 547 DLGALGMGKIVHGYIDRNKVEIDVKLGTSLVDMYAKCGDIENSLKVFNGMGVKDVFTWSA 368
            L  L +G+ ++ Y++   ++ +  L TSLVDMYAKCG ++ + ++F+ M  +DV  WSA
Sbjct: 237 RLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSA 296

Query: 367 VIIGLANHGFGEHALDYFAKMISGGIKPNDITFIGVLSACSHVGLVDRG-WTYFTSMNDK 191
           +I G +       ALD F +M    I PN+IT + +LS+C+ +G ++ G W +F     +
Sbjct: 297 MISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKR 356

Query: 190 YGVTPKIEHYGCMVDLLGRTGCVKEALELIKGMPMMPNAAIWGALLSACRVHG 32
             +T  +     ++D   + G V+ ++E+   MP + N   W  L+     +G
Sbjct: 357 MKLTVTLG--TALMDFYAKCGSVESSIEVFGKMP-VKNVLSWTVLIQGLASNG 406



 Score =  103 bits (256), Expect = 5e-20
 Identities = 72/267 (26%), Positives = 125/267 (46%), Gaps = 33/267 (12%)
 Frame = -1

Query: 724 ARQLFDMSSERDLVSWSSMIAGYAKSRQSNEALILFHDMQSANVRPDRVTMVSVLSACGD 545
           A  +F    E D  +++ MI G+   +  +EA++LF +M   +V+PD  T   +L  C  
Sbjct: 77  AVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSR 136

Query: 544 LGALGMGKIVHGYIDRNKVEIDVKLGTSLVDMYAKCGDIENSLKVFNGMGVKDVFTWSAV 365
           L AL  G+ +H  I +        +  +L+ MYA CG++E + +VF+ M  ++V TW+++
Sbjct: 137 LQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSM 196

Query: 364 IIGLANHGFGEHALDYFAKMISGGIKPNDITFIGVLSACSHVGLVDRG-W---------- 218
             G    G  E  +  F +M+   I+ +++T + VL+AC  +  ++ G W          
Sbjct: 197 FAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGL 256

Query: 217 ----TYFTSMNDKYGVTPKIEHYGCMVDLLGRTGCV---------------KEALELIKG 95
               T  TS+ D Y    +++    + D + R   V               +EAL+L   
Sbjct: 257 KGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHE 316

Query: 94  MP---MMPNAAIWGALLSACRVHGHLE 23
           M    + PN     ++LS+C V G LE
Sbjct: 317 MQKANIDPNEITMVSILSSCAVLGALE 343