BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017268
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat...   149   2e-34
emb|CBI23791.3| unnamed protein product [Vitis vinifera]              149   2e-34
ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat...   125   4e-27
ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containi...   125   4e-27
ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21

>ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 689

 Score =  149 bits (377), Expect = 2e-34
 Identities = 73/96 (76%), Positives = 80/96 (83%)
 Frame = -3

Query: 288 DLLRVQVGKCVHGHSLRNGLECDLYVGTSLIDMYVKCGEIFEARKLFDKMSVRDVSSWNA 109
           DL RV +G+CVHG  LR GLE D YVG SLIDMYVKCG I +ARKLFDKM VRD++SWNA
Sbjct: 193 DLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNA 252

Query: 108 LIAGYMKNGDVNVAEDLFRRMLERNIVSWTAMISGY 1
           LIAGYMK G++ VAEDLF RM  RNIVSWTAMISGY
Sbjct: 253 LIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGY 288


>emb|CBI23791.3| unnamed protein product [Vitis vinifera]
          Length = 615

 Score =  149 bits (377), Expect = 2e-34
 Identities = 73/96 (76%), Positives = 80/96 (83%)
 Frame = -3

Query: 288 DLLRVQVGKCVHGHSLRNGLECDLYVGTSLIDMYVKCGEIFEARKLFDKMSVRDVSSWNA 109
           DL RV +G+CVHG  LR GLE D YVG SLIDMYVKCG I +ARKLFDKM VRD++SWNA
Sbjct: 119 DLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNA 178

Query: 108 LIAGYMKNGDVNVAEDLFRRMLERNIVSWTAMISGY 1
           LIAGYMK G++ VAEDLF RM  RNIVSWTAMISGY
Sbjct: 179 LIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGY 214


>ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 642

 Score =  125 bits (314), Expect = 4e-27
 Identities = 62/96 (64%), Positives = 75/96 (78%)
 Frame = -3

Query: 288 DLLRVQVGKCVHGHSLRNGLECDLYVGTSLIDMYVKCGEIFEARKLFDKMSVRDVSSWNA 109
           +LL V +GKCVHG  LR GL+ DLYV TSLI +Y KCGEI +A K+FD M++RDVSSWNA
Sbjct: 146 ELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNA 205

Query: 108 LIAGYMKNGDVNVAEDLFRRMLERNIVSWTAMISGY 1
           L+AGY K+G ++ A  +F RM  RNIVSWT MISGY
Sbjct: 206 LLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGY 241



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
 Frame = -3

Query: 285 LLRVQVGKCVHGHSLRNGLECDLYVGTSLIDMYVKCGEIFEARKLFDKM--SVRDVSSWN 112
           L  ++ G+ +H  + R GL  +  V  +L  MY KCG + +AR  FDK+  + +++ +WN
Sbjct: 281 LSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWN 340

Query: 111 ALIAGYMKNGDVNVAEDLFRRMLERNI----VSWTAMISG 4
            +I  Y   G    A   FR M++  I    +++T ++SG
Sbjct: 341 TMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSG 380


>ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Cucumis sativus]
          Length = 679

 Score =  125 bits (314), Expect = 4e-27
 Identities = 62/96 (64%), Positives = 75/96 (78%)
 Frame = -3

Query: 288 DLLRVQVGKCVHGHSLRNGLECDLYVGTSLIDMYVKCGEIFEARKLFDKMSVRDVSSWNA 109
           +LL V +GKCVHG  LR GL+ DLYV TSLI +Y KCGEI +A K+FD M++RDVSSWNA
Sbjct: 183 ELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNA 242

Query: 108 LIAGYMKNGDVNVAEDLFRRMLERNIVSWTAMISGY 1
           L+AGY K+G ++ A  +F RM  RNIVSWT MISGY
Sbjct: 243 LLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGY 278



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
 Frame = -3

Query: 285 LLRVQVGKCVHGHSLRNGLECDLYVGTSLIDMYVKCGEIFEARKLFDKM--SVRDVSSWN 112
           L  ++ G+ +H  + R GL  +  V  +L  MY KCG + +AR  FDK+  + +++ +WN
Sbjct: 318 LSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWN 377

Query: 111 ALIAGYMKNGDVNVAEDLFRRMLERNI----VSWTAMISG 4
            +I  Y   G    A   FR M++  I    +++T ++SG
Sbjct: 378 TMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSG 417


>ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
           [Vitis vinifera]
          Length = 576

 Score =  107 bits (267), Expect = 1e-21
 Identities = 50/95 (52%), Positives = 69/95 (72%)
 Frame = -3

Query: 285 LLRVQVGKCVHGHSLRNGLECDLYVGTSLIDMYVKCGEIFEARKLFDKMSVRDVSSWNAL 106
           LL + VG+ +H  ++  GL  D++V T+LI MY  CG + EAR+LFD +  RDV+ WNA+
Sbjct: 152 LLAIHVGRQIHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAM 211

Query: 105 IAGYMKNGDVNVAEDLFRRMLERNIVSWTAMISGY 1
           +AGY K GDV+ A  LF RM ERN++SWTA+I+GY
Sbjct: 212 VAGYAKVGDVDNARHLFERMPERNVISWTAVIAGY 246