BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017255
         (934 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    80   9e-13
ref|XP_002528337.1| conserved hypothetical protein [Ricinus comm...    77   4e-12
ref|XP_002306011.1| predicted protein [Populus trichocarpa] gi|2...    76   1e-11
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    76   1e-11
ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin...    75   2e-11

>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 79.7 bits (195), Expect = 9e-13
 Identities = 42/105 (40%), Positives = 64/105 (60%)
 Frame = +1

Query: 118 YRTVLFKIYKFVESDGTNKWDEIETIGDNAFFMGYNSSFSLSASGFMGCKPNSIYFTDDR 297
           YRT+ F++++ ++ +G  +W  + T+GD A F+G NSS SLSA+ F GC  N IY+TDD 
Sbjct: 290 YRTIRFEVFR-LDWNGP-QWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDY 347

Query: 298 IPRKHIPEPIRHDIGIFSLADKTVELIYPIRSKPMRPPLFWFTPI 432
           +   +      HD+GIF L D+T+E + P   +    PL W  P+
Sbjct: 348 LDANYDGHFGDHDLGIFKLCDETIEPL-PCYPRNFTSPLQWSPPL 391


>ref|XP_002528337.1| conserved hypothetical protein [Ricinus communis]
           gi|223532205|gb|EEF34009.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 102

 Score = 77.4 bits (189), Expect = 4e-12
 Identities = 40/104 (38%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
 Frame = +1

Query: 130 LFKIYKFVESDGTNKWDEIETIGDNAFFMGYNSSFSLSASGFMGCKPNSIYFTDDRIPRK 309
           +F +Y+   S+    W E+E++ +   F+G N S SLSA  F GC  NSIYFTDD + + 
Sbjct: 1   MFHVYRLDSSE--QNWVEVESLNNQVLFLGMNHSMSLSAQDFSGCDRNSIYFTDDNLYQM 58

Query: 310 HIPEPI-RHDIGIFSLADKTVELIYPIRSKPMRPPLFWFTPIPW 438
           +       HD G FSL DK V+L    + + + P   W  P PW
Sbjct: 59  YEDYSYGGHDFGKFSLEDKVVKLFNGHKIEKVDPSPLWIVPNPW 102


>ref|XP_002306011.1| predicted protein [Populus trichocarpa] gi|222848975|gb|EEE86522.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
 Frame = +1

Query: 118 YRTVLFKIYKFVESDGTNKWDEIETIGDNAFFMGYNSSFSLSASGFMGCKPNSIYFTDDR 297
           YRT+LF +++      T  W  + ++ D A F+G N S S+      GC+ NS+YFTDD 
Sbjct: 357 YRTLLFGLFRMDFDKET--WVSMTSLDDQAVFVGGNHSASVLTCDLPGCEKNSVYFTDDY 414

Query: 298 IPRKHIPEPIR-HDIGIFSLADKTVELIYPIRSKPMRPPLFWFTPIPW 438
             R +       HD+G+F+L DK+V+  Y + +  ++PP  WF P PW
Sbjct: 415 WERMNEDYLYGGHDMGVFNLKDKSVKHFYQLDALKIQPPPCWFLPNPW 462


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 41/110 (37%), Positives = 65/110 (59%), Gaps = 4/110 (3%)
 Frame = +1

Query: 118 YRTVLFKIYKFVESDGTNKWDEIETIGDNAFFMGYNSSFSLSASGFMGCKPNSIYFTDDR 297
           Y+T  F+++K ++ +G  +W+ + ++GD   F+G NSS +LSASG  GC  + IY+TDD 
Sbjct: 285 YKTARFEVFK-LDLNGP-RWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDDY 342

Query: 298 IPRKHIPEPIRHDIGIFSLADKTVELI--YPIR--SKPMRPPLFWFTPIP 435
               +      HD+GIF L+D ++E +  YP    S+   PP  W +P P
Sbjct: 343 SANNYDGHIGEHDLGIFKLSDGSIEPLPCYPRNSYSRLQWPPPLWISPNP 392


>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 393

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 43/115 (37%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
 Frame = +1

Query: 103 EDSRCYRTVLFKIYKFVESDGTNKWDEIETIGDNAFFMGYNSSFSLSASGFMGCKPNSIY 282
           E    YRTV F+++K   + G   W  +ET+G+   F+G NSS S  AS F+GC  + IY
Sbjct: 280 ESDLVYRTVGFEVFKM--NWGLLTWQRVETLGERVLFVGGNSSLSFCASDFVGCSADCIY 337

Query: 283 FTDDRIPRKHIPEPIRHDIGIFSLADKTVELIYPIRSKP---MRPPL-FWFTPIP 435
           FTDD           +HD+G+F L DK++E +          +R PL  W +P P
Sbjct: 338 FTDDYSESNDDDACGKHDLGVFRLRDKSIEPLPCFNQNSCSRLRWPLPIWVSPNP 392