BLASTX nr result

ID: Coptis21_contig00017240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017240
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK26019.1|AF360309_1 putative nucleotide-binding protein [Ar...   157   6e-37
ref|NP_568748.1| nucleotide binding protein 35 [Arabidopsis thal...   157   6e-37
dbj|BAB08742.1| nucleotide-binding protein [Arabidopsis thaliana]     157   6e-37
gb|AAN86569.1| nucleotide binding protein [Cypripedium parviflor...   155   3e-36
ref|XP_003589206.1| Cytosolic Fe-S cluster assembly factor nbp35...   154   5e-36

>gb|AAK26019.1|AF360309_1 putative nucleotide-binding protein [Arabidopsis thaliana]
          Length = 350

 Score =  157 bits (398), Expect = 6e-37
 Identities = 77/87 (88%), Positives = 80/87 (91%)
 Frame = -1

Query: 262 MENGNAIPEDANEHCPGPQSESAGKSDSCQDCPNQKVCATAPKGPDPGLVEIVERMATVK 83
           MENG+ IPEDANEHCPGPQSESAGKSDSC  CPNQ+ CATAPKGPDP LV I ERM+TVK
Sbjct: 1   MENGD-IPEDANEHCPGPQSESAGKSDSCAGCPNQEACATAPKGPDPDLVAIAERMSTVK 59

Query: 82  HKILVLSGKGGVGKSTFSAQLSFALAG 2
           HKILVLSGKGGVGKSTFSAQLSFALAG
Sbjct: 60  HKILVLSGKGGVGKSTFSAQLSFALAG 86


>ref|NP_568748.1| nucleotide binding protein 35 [Arabidopsis thaliana]
           gi|23297101|gb|AAN13093.1| nucleotide-binding protein
           [Arabidopsis thaliana] gi|332008634|gb|AED96017.1|
           nucleotide binding protein 35 [Arabidopsis thaliana]
          Length = 350

 Score =  157 bits (398), Expect = 6e-37
 Identities = 77/87 (88%), Positives = 80/87 (91%)
 Frame = -1

Query: 262 MENGNAIPEDANEHCPGPQSESAGKSDSCQDCPNQKVCATAPKGPDPGLVEIVERMATVK 83
           MENG+ IPEDANEHCPGPQSESAGKSDSC  CPNQ+ CATAPKGPDP LV I ERM+TVK
Sbjct: 1   MENGD-IPEDANEHCPGPQSESAGKSDSCAGCPNQEACATAPKGPDPDLVAIAERMSTVK 59

Query: 82  HKILVLSGKGGVGKSTFSAQLSFALAG 2
           HKILVLSGKGGVGKSTFSAQLSFALAG
Sbjct: 60  HKILVLSGKGGVGKSTFSAQLSFALAG 86


>dbj|BAB08742.1| nucleotide-binding protein [Arabidopsis thaliana]
          Length = 317

 Score =  157 bits (398), Expect = 6e-37
 Identities = 77/87 (88%), Positives = 80/87 (91%)
 Frame = -1

Query: 262 MENGNAIPEDANEHCPGPQSESAGKSDSCQDCPNQKVCATAPKGPDPGLVEIVERMATVK 83
           MENG+ IPEDANEHCPGPQSESAGKSDSC  CPNQ+ CATAPKGPDP LV I ERM+TVK
Sbjct: 1   MENGD-IPEDANEHCPGPQSESAGKSDSCAGCPNQEACATAPKGPDPDLVAIAERMSTVK 59

Query: 82  HKILVLSGKGGVGKSTFSAQLSFALAG 2
           HKILVLSGKGGVGKSTFSAQLSFALAG
Sbjct: 60  HKILVLSGKGGVGKSTFSAQLSFALAG 86


>gb|AAN86569.1| nucleotide binding protein [Cypripedium parviflorum var. pubescens]
          Length = 352

 Score =  155 bits (392), Expect = 3e-36
 Identities = 75/87 (86%), Positives = 80/87 (91%), Gaps = 1/87 (1%)
 Frame = -1

Query: 262 MENGN-AIPEDANEHCPGPQSESAGKSDSCQDCPNQKVCATAPKGPDPGLVEIVERMATV 86
           MENGN  IPE+A EHCPGPQSESAGKSDSC+ CPNQ++CATAPKGPDP LV I ERMAT+
Sbjct: 1   MENGNHEIPENAREHCPGPQSESAGKSDSCEGCPNQQICATAPKGPDPDLVGIAERMATI 60

Query: 85  KHKILVLSGKGGVGKSTFSAQLSFALA 5
           KHKILVLSGKGGVGKSTFSAQLSFALA
Sbjct: 61  KHKILVLSGKGGVGKSTFSAQLSFALA 87


>ref|XP_003589206.1| Cytosolic Fe-S cluster assembly factor nbp35 [Medicago truncatula]
           gi|355478254|gb|AES59457.1| Cytosolic Fe-S cluster
           assembly factor nbp35 [Medicago truncatula]
           gi|388520137|gb|AFK48130.1| unknown [Medicago
           truncatula]
          Length = 355

 Score =  154 bits (390), Expect = 5e-36
 Identities = 73/86 (84%), Positives = 81/86 (94%)
 Frame = -1

Query: 262 MENGNAIPEDANEHCPGPQSESAGKSDSCQDCPNQKVCATAPKGPDPGLVEIVERMATVK 83
           MENG+ IPEDANEHCPGPQS+SAGKSD+C+ CPNQ++CATAPKGPDP +V I ERMATVK
Sbjct: 1   MENGD-IPEDANEHCPGPQSDSAGKSDACEGCPNQQICATAPKGPDPDMVAIAERMATVK 59

Query: 82  HKILVLSGKGGVGKSTFSAQLSFALA 5
           HKILVLSGKGGVGKSTFSAQL+FALA
Sbjct: 60  HKILVLSGKGGVGKSTFSAQLAFALA 85


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