BLASTX nr result

ID: Coptis21_contig00017237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017237
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275312.1| PREDICTED: eukaryotic translation initiation...   235   3e-60
ref|NP_973648.1| Eukaryotic translation initiation factor 2 subu...   230   8e-59
gb|AAD25944.1|AF085279_17 hypothetical EIF-2-Alpha [Arabidopsis ...   230   8e-59
ref|NP_565927.1| Eukaryotic translation initiation factor 2 subu...   230   8e-59
ref|XP_002276751.1| PREDICTED: eukaryotic translation initiation...   229   1e-58

>ref|XP_002275312.1| PREDICTED: eukaryotic translation initiation factor 2 subunit alpha
           [Vitis vinifera] gi|297745848|emb|CBI15904.3| unnamed
           protein product [Vitis vinifera]
          Length = 344

 Score =  235 bits (599), Expect = 3e-60
 Identities = 117/132 (88%), Positives = 128/132 (96%)
 Frame = +2

Query: 26  MATNTPNLECRMYESKLPELDDAVMIQVKNIAESGAYVSLLEYNNIEGMILFSELSRRRI 205
           MA+NTPNLECRMYE+K PE+D AVMIQVKNIA+ GAYVSLLEYNNIEGMILFSELSRRRI
Sbjct: 1   MASNTPNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRI 60

Query: 206 RSVSALIKVGRQEPVMVIRVDKDKGYIDLSKRRVSEEDIAVCEERYNKSKLVHSILRHVA 385
           RSVS+LIKVGRQEPVMV+RVDK+KGYIDLSKRRVSEEDI VCEERYNKSKLVHSI+RHVA
Sbjct: 61  RSVSSLIKVGRQEPVMVLRVDKEKGYIDLSKRRVSEEDIQVCEERYNKSKLVHSIMRHVA 120

Query: 386 ETLSIDLEDLYI 421
           ET+++DLEDLYI
Sbjct: 121 ETMNLDLEDLYI 132


>ref|NP_973648.1| Eukaryotic translation initiation factor 2 subunit 1 [Arabidopsis
           thaliana] gi|79324819|ref|NP_001031518.1| Eukaryotic
           translation initiation factor 2 subunit 1 [Arabidopsis
           thaliana] gi|124300956|gb|ABN04730.1| At2g40290
           [Arabidopsis thaliana] gi|330254714|gb|AEC09808.1|
           Eukaryotic translation initiation factor 2 subunit 1
           [Arabidopsis thaliana] gi|330254715|gb|AEC09809.1|
           Eukaryotic translation initiation factor 2 subunit 1
           [Arabidopsis thaliana]
          Length = 241

 Score =  230 bits (587), Expect = 8e-59
 Identities = 116/132 (87%), Positives = 125/132 (94%)
 Frame = +2

Query: 26  MATNTPNLECRMYESKLPELDDAVMIQVKNIAESGAYVSLLEYNNIEGMILFSELSRRRI 205
           MA+ TPNLECRMYE+K PE+D AVMIQVKNIA+ GAYVSLLEYNNIEGMILFSELSRRRI
Sbjct: 1   MASQTPNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRI 60

Query: 206 RSVSALIKVGRQEPVMVIRVDKDKGYIDLSKRRVSEEDIAVCEERYNKSKLVHSILRHVA 385
           RSVS+LIKVGR EPVMV+RVDK+KGYIDLSKRRVSEEDI  CEERYNKSKLVHSI+RHVA
Sbjct: 61  RSVSSLIKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQTCEERYNKSKLVHSIMRHVA 120

Query: 386 ETLSIDLEDLYI 421
           ETLSIDLEDLY+
Sbjct: 121 ETLSIDLEDLYV 132


>gb|AAD25944.1|AF085279_17 hypothetical EIF-2-Alpha [Arabidopsis thaliana]
          Length = 370

 Score =  230 bits (587), Expect = 8e-59
 Identities = 116/132 (87%), Positives = 125/132 (94%)
 Frame = +2

Query: 26  MATNTPNLECRMYESKLPELDDAVMIQVKNIAESGAYVSLLEYNNIEGMILFSELSRRRI 205
           MA+ TPNLECRMYE+K PE+D AVMIQVKNIA+ GAYVSLLEYNNIEGMILFSELSRRRI
Sbjct: 1   MASQTPNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRI 60

Query: 206 RSVSALIKVGRQEPVMVIRVDKDKGYIDLSKRRVSEEDIAVCEERYNKSKLVHSILRHVA 385
           RSVS+LIKVGR EPVMV+RVDK+KGYIDLSKRRVSEEDI  CEERYNKSKLVHSI+RHVA
Sbjct: 61  RSVSSLIKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQTCEERYNKSKLVHSIMRHVA 120

Query: 386 ETLSIDLEDLYI 421
           ETLSIDLEDLY+
Sbjct: 121 ETLSIDLEDLYV 132


>ref|NP_565927.1| Eukaryotic translation initiation factor 2 subunit 1 [Arabidopsis
           thaliana] gi|19347786|gb|AAL86344.1| putative eukaryotic
           translation initiation factor 2 alpha subunit eIF2
           [Arabidopsis thaliana] gi|20198018|gb|AAD25664.2|
           putative eukaryotic translation initiation factor 2
           alpha subunit, eIF2 [Arabidopsis thaliana]
           gi|21436249|gb|AAM51263.1| putative eukaryotic
           translation initiation factor 2 alpha subunit eIF2
           [Arabidopsis thaliana] gi|330254713|gb|AEC09807.1|
           Eukaryotic translation initiation factor 2 subunit 1
           [Arabidopsis thaliana]
          Length = 344

 Score =  230 bits (587), Expect = 8e-59
 Identities = 116/132 (87%), Positives = 125/132 (94%)
 Frame = +2

Query: 26  MATNTPNLECRMYESKLPELDDAVMIQVKNIAESGAYVSLLEYNNIEGMILFSELSRRRI 205
           MA+ TPNLECRMYE+K PE+D AVMIQVKNIA+ GAYVSLLEYNNIEGMILFSELSRRRI
Sbjct: 1   MASQTPNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRI 60

Query: 206 RSVSALIKVGRQEPVMVIRVDKDKGYIDLSKRRVSEEDIAVCEERYNKSKLVHSILRHVA 385
           RSVS+LIKVGR EPVMV+RVDK+KGYIDLSKRRVSEEDI  CEERYNKSKLVHSI+RHVA
Sbjct: 61  RSVSSLIKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQTCEERYNKSKLVHSIMRHVA 120

Query: 386 ETLSIDLEDLYI 421
           ETLSIDLEDLY+
Sbjct: 121 ETLSIDLEDLYV 132


>ref|XP_002276751.1| PREDICTED: eukaryotic translation initiation factor 2 subunit alpha
           [Vitis vinifera]
          Length = 344

 Score =  229 bits (585), Expect = 1e-58
 Identities = 115/132 (87%), Positives = 124/132 (93%)
 Frame = +2

Query: 26  MATNTPNLECRMYESKLPELDDAVMIQVKNIAESGAYVSLLEYNNIEGMILFSELSRRRI 205
           MATNTPNLECRMYE+K PE+D AVMIQV NIA+ GAYVSLLEYNNIEGMILFSELSRRRI
Sbjct: 1   MATNTPNLECRMYEAKYPEVDMAVMIQVNNIADMGAYVSLLEYNNIEGMILFSELSRRRI 60

Query: 206 RSVSALIKVGRQEPVMVIRVDKDKGYIDLSKRRVSEEDIAVCEERYNKSKLVHSILRHVA 385
           RSVS+LIKVGR EPVMV+RVDK+KGYIDLSKRRVSEEDI  CEERYNKSKLVHSI+RHVA
Sbjct: 61  RSVSSLIKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVA 120

Query: 386 ETLSIDLEDLYI 421
           ET+ +DLEDLYI
Sbjct: 121 ETMQLDLEDLYI 132


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