BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017236
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containi...   185   4e-45
ref|XP_002525572.1| pentatricopeptide repeat-containing protein,...   135   5e-30
ref|XP_002886049.1| pentatricopeptide repeat-containing protein ...   117   7e-25
ref|NP_179518.1| pentatricopeptide repeat-containing protein [Ar...   114   6e-24
gb|AAS99720.1| At2g19280 [Arabidopsis thaliana] gi|62319953|dbj|...   113   2e-23

>ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
           [Vitis vinifera]
          Length = 644

 Score =  185 bits (469), Expect = 4e-45
 Identities = 96/169 (56%), Positives = 118/169 (69%)
 Frame = -2

Query: 510 WNLDLPNGQTIDLDDMNVNQILNDIFYETSNAALAFRFFTWCEQCNGSKNGIRSVCTMIH 331
           WNL   NG  IDL   NV +ILND+F E+++AALA  FF W E C GSK+ + SVCTMIH
Sbjct: 46  WNLGSQNGYRIDLSQFNVMKILNDLFEESTDAALALYFFRWSEYCMGSKHTVESVCTMIH 105

Query: 330 ILLVSGNMNHKVMRLVTDLVAKKDGTEEFDHLIFNVLEETHKDIRGLETVYSMLVGKYVG 151
           IL VSGNMNHK M L+  L++   G E + H IF  + ETH   R LETVY MLV  YV 
Sbjct: 106 IL-VSGNMNHKAMDLLLHLISYNSGEEGW-HNIFLKIHETHTKRRVLETVYGMLVNCYVK 163

Query: 150 QNLLSMALDLVCRMTMLNIFPASGVCNSLIRKLLESKEMELAWDFLDEM 4
           +N+  +AL L+C+M  LNIFP  GVCNSL++ LLES+++ LAWDFL EM
Sbjct: 164 ENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEM 212


>ref|XP_002525572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535151|gb|EEF36831.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 687

 Score =  135 bits (339), Expect = 5e-30
 Identities = 75/172 (43%), Positives = 110/172 (63%), Gaps = 3/172 (1%)
 Frame = -2

Query: 510 WNLDLPNGQTIDLDDMNVNQILNDIFYETSNAALAFRFFTWCEQCNGSKNGIRSVCTMIH 331
           W+L        DL  ++V  +LND+F E+ NAA A  FF   + C+G ++ IRS+C +IH
Sbjct: 75  WSLGCSTRFITDLSQVSVLGVLNDLFGESFNAAFALYFFRLSQCCSGLEHTIRSLCRLIH 134

Query: 330 ILLVSGNMNHKVMRLVTDLVAKKDGT---EEFDHLIFNVLEETHKDIRGLETVYSMLVGK 160
           IL V G  N++VM L+  LV    G    EE   L+F ++ +T    + LETVYSMLV  
Sbjct: 135 IL-VYGKRNYRVMDLILFLVRNIGGAVGEEELCDLLFKLVYDTGFGTKDLETVYSMLVDC 193

Query: 159 YVGQNLLSMALDLVCRMTMLNIFPASGVCNSLIRKLLESKEMELAWDFLDEM 4
           YV ++ +S+AL+L+  + +LNIFP+ GVCNSL++ LL S +++LAWD L+ M
Sbjct: 194 YVTESKVSLALNLIHEIKLLNIFPSMGVCNSLLKALLRSHQLDLAWDILEGM 245


>ref|XP_002886049.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297331889|gb|EFH62308.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 755

 Score =  117 bits (294), Expect = 7e-25
 Identities = 68/170 (40%), Positives = 101/170 (59%)
 Frame = -2

Query: 510 WNLDLPNGQTIDLDDMNVNQILNDIFYETSNAALAFRFFTWCEQCNGSKNGIRSVCTMIH 331
           W     +G + +LD  NV +IL+D+F ET +A++A  FF W E   G  +  RS+  MIH
Sbjct: 162 WIQKYESGFSTELDQYNVIRILDDLFEETLDASIALYFFRWSELWIGVAHSSRSISRMIH 221

Query: 330 ILLVSGNMNHKVMRLVTDLVAKKDGTEEFDHLIFNVLEETHKDIRGLETVYSMLVGKYVG 151
           IL VSGNMN++ + ++  LV K  G E    L+   L ET  D R LETV+ ML+   + 
Sbjct: 222 IL-VSGNMNYRAVDMLLCLVKKCSGKERSLCLVIKDLFETRIDRRVLETVFCMLIDCCIK 280

Query: 150 QNLLSMALDLVCRMTMLNIFPASGVCNSLIRKLLESKEMELAWDFLDEML 1
           +  + MAL L  ++    IFP+ GVC SL+ ++L +  +ELA +F++ ML
Sbjct: 281 ERKVDMALKLTYKIDQFGIFPSRGVCISLVEEILRAHGLELAREFVEHML 330


>ref|NP_179518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|334184304|ref|NP_001189552.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|218546774|sp|Q6NKW7.2|PP164_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g19280 gi|3135258|gb|AAC16458.1| putative
           salt-inducible protein [Arabidopsis thaliana]
           gi|330251769|gb|AEC06863.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|330251770|gb|AEC06864.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 693

 Score =  114 bits (286), Expect = 6e-24
 Identities = 66/170 (38%), Positives = 102/170 (60%)
 Frame = -2

Query: 510 WNLDLPNGQTIDLDDMNVNQILNDIFYETSNAALAFRFFTWCEQCNGSKNGIRSVCTMIH 331
           W     +G + +LD   V +IL+D+F ET +A++   FF W E   G ++  RS+  MIH
Sbjct: 95  WIQKYESGFSTELDQYTVIRILDDLFEETLDASIVLYFFRWSELWIGVEHSSRSISRMIH 154

Query: 330 ILLVSGNMNHKVMRLVTDLVAKKDGTEEFDHLIFNVLEETHKDIRGLETVYSMLVGKYVG 151
           IL VSGNMN++ + ++  LV K  G E    L+   L ET  D R LETV+S+L+   + 
Sbjct: 155 IL-VSGNMNYRAVDMLLCLVKKCSGEERSLCLVMKDLFETRIDRRVLETVFSILIDCCIR 213

Query: 150 QNLLSMALDLVCRMTMLNIFPASGVCNSLIRKLLESKEMELAWDFLDEML 1
           +  ++MAL L  ++    IFP+ GVC SL++++L    +ELA +F++ ML
Sbjct: 214 ERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHML 263


>gb|AAS99720.1| At2g19280 [Arabidopsis thaliana] gi|62319953|dbj|BAD94048.1|
           putative salt-inducible protein [Arabidopsis thaliana]
           gi|110738808|dbj|BAF01327.1| putative salt-inducible
           protein [Arabidopsis thaliana]
          Length = 693

 Score =  113 bits (282), Expect = 2e-23
 Identities = 65/170 (38%), Positives = 102/170 (60%)
 Frame = -2

Query: 510 WNLDLPNGQTIDLDDMNVNQILNDIFYETSNAALAFRFFTWCEQCNGSKNGIRSVCTMIH 331
           W     +G + +LD   V +IL+D+F ET +A++   FF W E   G ++  RS+  MIH
Sbjct: 95  WIQKYESGFSTELDQYTVIRILDDLFEETLDASIVLYFFRWSELWIGVEHSSRSISRMIH 154

Query: 330 ILLVSGNMNHKVMRLVTDLVAKKDGTEEFDHLIFNVLEETHKDIRGLETVYSMLVGKYVG 151
           IL VSGNMN++ + ++  LV K  G E    L+   L +T  D R LETV+S+L+   + 
Sbjct: 155 IL-VSGNMNYRAVDMLLCLVKKCSGEERSLCLVMKDLFKTRIDRRVLETVFSILIDCCIR 213

Query: 150 QNLLSMALDLVCRMTMLNIFPASGVCNSLIRKLLESKEMELAWDFLDEML 1
           +  ++MAL L  ++    IFP+ GVC SL++++L    +ELA +F++ ML
Sbjct: 214 ERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHML 263