BLASTX nr result

ID: Coptis21_contig00017235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017235
         (1189 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36765.3| unnamed protein product [Vitis vinifera]              363   3e-98
ref|XP_002284757.1| PREDICTED: mitochondrial Rho GTPase 1 [Vitis...   363   3e-98
ref|XP_004139182.1| PREDICTED: mitochondrial Rho GTPase 1-like [...   363   5e-98
gb|ABR67417.1| ATP/GTP/Ca++ binding protein [Cucumis melo subsp....   362   8e-98
ref|XP_004156425.1| PREDICTED: mitochondrial Rho GTPase 1-like [...   352   8e-95

>emb|CBI36765.3| unnamed protein product [Vitis vinifera]
          Length = 684

 Score =  363 bits (933), Expect = 3e-98
 Identities = 179/285 (62%), Positives = 224/285 (78%)
 Frame = -1

Query: 1189 AETSVLGGLLLHGFLSKWALMTLLEPVKSLASLFYIGYEGDPASAFHITRRRQLERKKQQ 1010
            AE + LGGL L GFLS+WAL+TLL+PV SL +L YIGY GDP SA  +TR+R+L+RKKQQ
Sbjct: 400  AEKTALGGLSLDGFLSEWALLTLLDPVSSLENLIYIGYAGDPPSAMRVTRKRRLDRKKQQ 459

Query: 1009 SERNVFQCFVFGPHLAGKSALLNSFLGGPFSESYTSNEDDQFAVNIVDQIEGTKKTLVLR 830
            S+RNVFQCFVFGP  AGKS LLN+FLG PFS+SY    D+++AVN+VDQ  G+KKTLVLR
Sbjct: 460  SDRNVFQCFVFGPKEAGKSGLLNAFLGRPFSDSYNPTIDERYAVNVVDQPGGSKKTLVLR 519

Query: 829  EISVDGVGDLLSSKESLAACDVAIFVHDSSSVLSCTRATELLVAVASHCKESGYEVPCLV 650
            EI+ DGV  LLS ++SLAACD+A+FV+DSS   S  RATELLV VASH + + YEVPCL+
Sbjct: 520  EIAEDGVRKLLSKRDSLAACDIALFVYDSSDESSWKRATELLVEVASHGENTSYEVPCLI 579

Query: 649  VAAKSDRDPNPLVIKHSTRVSQDMGLEAPIAISMKLGELNDVFCRIVSAAEHPHLGIPES 470
            VAAK D DP P+ I  STR++QDMG+E PI IS KLG+ N +F RI++AAEHPHL IPE+
Sbjct: 580  VAAKDDLDPYPMAIHDSTRLTQDMGIEPPIPISAKLGDFNTIFRRIIAAAEHPHLSIPET 639

Query: 469  EENRNTKQYRNLVSHSLIFVSVGTAISVAALVAYRVYVTRRNTSN 335
            E  R+ KQY  L++ SL+ VSVG A+++  L AYRVY  R++ S+
Sbjct: 640  EAGRSRKQYSRLINRSLMVVSVGAAVAIVGLAAYRVYAARKSASS 684


>ref|XP_002284757.1| PREDICTED: mitochondrial Rho GTPase 1 [Vitis vinifera]
          Length = 647

 Score =  363 bits (933), Expect = 3e-98
 Identities = 179/285 (62%), Positives = 224/285 (78%)
 Frame = -1

Query: 1189 AETSVLGGLLLHGFLSKWALMTLLEPVKSLASLFYIGYEGDPASAFHITRRRQLERKKQQ 1010
            AE + LGGL L GFLS+WAL+TLL+PV SL +L YIGY GDP SA  +TR+R+L+RKKQQ
Sbjct: 363  AEKTALGGLSLDGFLSEWALLTLLDPVSSLENLIYIGYAGDPPSAMRVTRKRRLDRKKQQ 422

Query: 1009 SERNVFQCFVFGPHLAGKSALLNSFLGGPFSESYTSNEDDQFAVNIVDQIEGTKKTLVLR 830
            S+RNVFQCFVFGP  AGKS LLN+FLG PFS+SY    D+++AVN+VDQ  G+KKTLVLR
Sbjct: 423  SDRNVFQCFVFGPKEAGKSGLLNAFLGRPFSDSYNPTIDERYAVNVVDQPGGSKKTLVLR 482

Query: 829  EISVDGVGDLLSSKESLAACDVAIFVHDSSSVLSCTRATELLVAVASHCKESGYEVPCLV 650
            EI+ DGV  LLS ++SLAACD+A+FV+DSS   S  RATELLV VASH + + YEVPCL+
Sbjct: 483  EIAEDGVRKLLSKRDSLAACDIALFVYDSSDESSWKRATELLVEVASHGENTSYEVPCLI 542

Query: 649  VAAKSDRDPNPLVIKHSTRVSQDMGLEAPIAISMKLGELNDVFCRIVSAAEHPHLGIPES 470
            VAAK D DP P+ I  STR++QDMG+E PI IS KLG+ N +F RI++AAEHPHL IPE+
Sbjct: 543  VAAKDDLDPYPMAIHDSTRLTQDMGIEPPIPISAKLGDFNTIFRRIIAAAEHPHLSIPET 602

Query: 469  EENRNTKQYRNLVSHSLIFVSVGTAISVAALVAYRVYVTRRNTSN 335
            E  R+ KQY  L++ SL+ VSVG A+++  L AYRVY  R++ S+
Sbjct: 603  EAGRSRKQYSRLINRSLMVVSVGAAVAIVGLAAYRVYAARKSASS 647


>ref|XP_004139182.1| PREDICTED: mitochondrial Rho GTPase 1-like [Cucumis sativus]
          Length = 647

 Score =  363 bits (932), Expect = 5e-98
 Identities = 180/285 (63%), Positives = 225/285 (78%)
 Frame = -1

Query: 1189 AETSVLGGLLLHGFLSKWALMTLLEPVKSLASLFYIGYEGDPASAFHITRRRQLERKKQQ 1010
            AE + +GGL +  FLS W+LMTLL PV ++ +L YIGY GDPASA  +TR+R+L+RKKQQ
Sbjct: 363  AERNAMGGLSIDDFLSLWSLMTLLNPVYTIENLIYIGYPGDPASAVRVTRKRRLDRKKQQ 422

Query: 1009 SERNVFQCFVFGPHLAGKSALLNSFLGGPFSESYTSNEDDQFAVNIVDQIEGTKKTLVLR 830
             +RNV QCFVFGP  AGKS+LL++FL  PFS +YT   ++++AVN+VDQ EGTKKTL+LR
Sbjct: 423  LDRNVLQCFVFGPKKAGKSSLLDAFLARPFSVTYTPTTEERYAVNVVDQPEGTKKTLILR 482

Query: 829  EISVDGVGDLLSSKESLAACDVAIFVHDSSSVLSCTRATELLVAVASHCKESGYEVPCLV 650
            EI  DGV  LLSSKESLAACD+A+FVHDSS   S  +AT+LLV VASH +++GYEVPCL+
Sbjct: 483  EIPEDGVKKLLSSKESLAACDIALFVHDSSDESSWKKATDLLVEVASHGEDTGYEVPCLI 542

Query: 649  VAAKSDRDPNPLVIKHSTRVSQDMGLEAPIAISMKLGELNDVFCRIVSAAEHPHLGIPES 470
            VAAK D D  PL I+ STRVSQDMG+E PI IS KLG+ N+VF RI SAAEHPHL IPE+
Sbjct: 543  VAAKDDLDSFPLAIQDSTRVSQDMGIEPPIPISTKLGDFNNVFRRITSAAEHPHLSIPET 602

Query: 469  EENRNTKQYRNLVSHSLIFVSVGTAISVAALVAYRVYVTRRNTSN 335
            E  R+ K Y  L +HSL+FVSVG A+++  L AYRVY+ R+N+S+
Sbjct: 603  EAGRSRKHYHKLKNHSLMFVSVGAAVTIVGLAAYRVYLARKNSSS 647


>gb|ABR67417.1| ATP/GTP/Ca++ binding protein [Cucumis melo subsp. melo]
          Length = 647

 Score =  362 bits (930), Expect = 8e-98
 Identities = 179/285 (62%), Positives = 225/285 (78%)
 Frame = -1

Query: 1189 AETSVLGGLLLHGFLSKWALMTLLEPVKSLASLFYIGYEGDPASAFHITRRRQLERKKQQ 1010
            AE + +GGL +  FLS W+LMTLL PV ++ +L YIGY GDPASA  +TR+R+L+RKKQQ
Sbjct: 363  AERNAMGGLSIDDFLSLWSLMTLLNPVYTIENLIYIGYSGDPASAVRVTRKRRLDRKKQQ 422

Query: 1009 SERNVFQCFVFGPHLAGKSALLNSFLGGPFSESYTSNEDDQFAVNIVDQIEGTKKTLVLR 830
             +RNV QCFVFGP  AGKS+LL++FL  PFS +YT   ++++AVN+VDQ EGTKKTL+LR
Sbjct: 423  LDRNVLQCFVFGPKKAGKSSLLDAFLARPFSVTYTPTTEERYAVNVVDQPEGTKKTLILR 482

Query: 829  EISVDGVGDLLSSKESLAACDVAIFVHDSSSVLSCTRATELLVAVASHCKESGYEVPCLV 650
            EI  DGV  LLSSKESLAACD+A+FVHDSS   S  +AT+LLV VASH +++GYEVPCL+
Sbjct: 483  EIPEDGVKKLLSSKESLAACDIALFVHDSSDESSWKKATDLLVEVASHGEDTGYEVPCLI 542

Query: 649  VAAKSDRDPNPLVIKHSTRVSQDMGLEAPIAISMKLGELNDVFCRIVSAAEHPHLGIPES 470
            VAAK D D  PL I+ STRVSQDMG+E PI IS KLG+ N+VF RI SAAEHPHL IPE+
Sbjct: 543  VAAKDDLDSFPLAIQDSTRVSQDMGIEPPIPISTKLGDFNNVFRRITSAAEHPHLSIPET 602

Query: 469  EENRNTKQYRNLVSHSLIFVSVGTAISVAALVAYRVYVTRRNTSN 335
            E  R+ K Y  L++ SL+FVSVG A+++  L AYRVY+ R+N+S+
Sbjct: 603  EAGRSRKHYHKLINRSLMFVSVGAAVTIVGLAAYRVYLARKNSSS 647


>ref|XP_004156425.1| PREDICTED: mitochondrial Rho GTPase 1-like [Cucumis sativus]
          Length = 648

 Score =  352 bits (904), Expect = 8e-95
 Identities = 177/286 (61%), Positives = 223/286 (77%), Gaps = 1/286 (0%)
 Frame = -1

Query: 1189 AETSVLGGLLLHGFLSKWALMTLLEPVKSLASLFYIGYEGDPASAFHITRRRQLERKKQQ 1010
            AE + +GGL +  FLS W+LMTLL PV ++ +L YIGY GDPASA  +TR+R+L+RKKQQ
Sbjct: 363  AERNAMGGLSIDDFLSLWSLMTLLNPVYTIENLIYIGYPGDPASAVRVTRKRRLDRKKQQ 422

Query: 1009 SERNVFQCFVFGPHLAGKSALLNSFLGGPFSESYTSNEDDQFAVNIVDQIE-GTKKTLVL 833
             +RNV QCFVFGP  AGKS+LL++FL  PFS +YT   ++++AVN+VDQ E   KKTL+L
Sbjct: 423  LDRNVLQCFVFGPKKAGKSSLLDAFLARPFSVTYTPTTEERYAVNVVDQPEVRNKKTLIL 482

Query: 832  REISVDGVGDLLSSKESLAACDVAIFVHDSSSVLSCTRATELLVAVASHCKESGYEVPCL 653
            REI  DGV  LLSSKESLAACD+A+FVHDSS   S  +AT+LLV VASH +++GYEVPCL
Sbjct: 483  REIPEDGVKKLLSSKESLAACDIALFVHDSSDESSWKKATDLLVEVASHGEDTGYEVPCL 542

Query: 652  VVAAKSDRDPNPLVIKHSTRVSQDMGLEAPIAISMKLGELNDVFCRIVSAAEHPHLGIPE 473
            +VAAK D D  PL I+ STRVSQDMG+E PI IS KLG+ N+VF RI SAAEHPHL IPE
Sbjct: 543  IVAAKDDLDSFPLAIQDSTRVSQDMGIEPPIPISTKLGDFNNVFRRITSAAEHPHLSIPE 602

Query: 472  SEENRNTKQYRNLVSHSLIFVSVGTAISVAALVAYRVYVTRRNTSN 335
            +E  R+ K Y  L++ SL+FVSVG A+++  L AYRVY+ R+N+S+
Sbjct: 603  TEAGRSRKHYHKLINRSLMFVSVGAAVTIVGLAAYRVYLARKNSSS 648


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