BLASTX nr result
ID: Coptis21_contig00017233
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00017233
(1041 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABY19382.1| putative staygreen protein [Nicotiana tabacum] 150 4e-60
ref|XP_002304454.1| predicted protein [Populus trichocarpa] gi|2... 146 6e-59
ref|XP_002509680.1| conserved hypothetical protein [Ricinus comm... 147 4e-58
ref|NP_001234723.1| senescence-inducible chloroplast stay-green ... 147 5e-58
gb|ABX82698.1| stay green protein [Capsicum annuum] gi|170947249... 143 1e-57
>gb|ABY19382.1| putative staygreen protein [Nicotiana tabacum]
Length = 267
Score = 150 bits (380), Expect(2) = 4e-60
Identities = 68/101 (67%), Positives = 79/101 (78%)
Frame = -1
Query: 810 KELPVVLKAFVHGDVNLFQNYPELEDALVWVYFHSNIHEFNRVECWGPLKDAAAPSDEGG 631
KELPVVLKAFVHGD NL NYPEL++ALVWVYFHSNI EFN+VECWGPLK+AA+PS GG
Sbjct: 149 KELPVVLKAFVHGDKNLLNNYPELQEALVWVYFHSNIQEFNKVECWGPLKEAASPSSSGG 208
Query: 630 VVRRQEFSSSYSELEKNAWIRPQPCEEDCSCCFPSTSLIPW 508
V + +++ S + W PQPC+E CSCCFP SLIPW
Sbjct: 209 VGGKMRNTNTTS---NSNWDLPQPCQESCSCCFPPMSLIPW 246
Score = 108 bits (269), Expect(2) = 4e-60
Identities = 50/58 (86%), Positives = 53/58 (91%)
Frame = -2
Query: 1040 QLQGWSNRLYRDEVVAEWKKVKGKMSLHVHCHISGGHSLLNFFARLRFFIFYKELPVV 867
QLQGW NRL RDEVVAEWKKVKGKMSLHVHCHISGGH LL+ FARLR++IF KELPVV
Sbjct: 97 QLQGWYNRLQRDEVVAEWKKVKGKMSLHVHCHISGGHFLLDLFARLRYYIFCKELPVV 154
>ref|XP_002304454.1| predicted protein [Populus trichocarpa] gi|222841886|gb|EEE79433.1|
predicted protein [Populus trichocarpa]
Length = 269
Score = 146 bits (368), Expect(2) = 6e-59
Identities = 67/110 (60%), Positives = 83/110 (75%), Gaps = 2/110 (1%)
Frame = -1
Query: 810 KELPVVLKAFVHGDVNLFQNYPELEDALVWVYFHSNIHEFNRVECWGPLKDAAAP--SDE 637
KELPVVLKAF HGD NLF +YPEL++ALVWVYFHSNI EFN+VECWGPLKDAAAP ++
Sbjct: 151 KELPVVLKAFFHGDGNLFSSYPELQEALVWVYFHSNIPEFNKVECWGPLKDAAAPCTAES 210
Query: 636 GGVVRRQEFSSSYSELEKNAWIRPQPCEEDCSCCFPSTSLIPWSQNLSEQ 487
GG +E +S+ W P+PC+E+C CCFP SLIPWS+ + ++
Sbjct: 211 GGPTENKEQASN--------WNLPEPCQENCKCCFPPMSLIPWSEMVPQE 252
Score = 108 bits (271), Expect(2) = 6e-59
Identities = 50/58 (86%), Positives = 53/58 (91%)
Frame = -2
Query: 1040 QLQGWSNRLYRDEVVAEWKKVKGKMSLHVHCHISGGHSLLNFFARLRFFIFYKELPVV 867
QLQGWSN+LYRDEVVAEWKKVKGKMSLHVHCHISGGH LL+ RLR+FIF KELPVV
Sbjct: 99 QLQGWSNKLYRDEVVAEWKKVKGKMSLHVHCHISGGHFLLDLCCRLRYFIFRKELPVV 156
>ref|XP_002509680.1| conserved hypothetical protein [Ricinus communis]
gi|223549579|gb|EEF51067.1| conserved hypothetical
protein [Ricinus communis]
Length = 273
Score = 147 bits (371), Expect(2) = 4e-58
Identities = 69/103 (66%), Positives = 77/103 (74%)
Frame = -1
Query: 810 KELPVVLKAFVHGDVNLFQNYPELEDALVWVYFHSNIHEFNRVECWGPLKDAAAPSDEGG 631
KELPVVLKAFVHGD NLF NYPEL++ALVWVYFHSNI EFNRVECWGPLK+AAAPS
Sbjct: 151 KELPVVLKAFVHGDGNLFNNYPELQEALVWVYFHSNIPEFNRVECWGPLKEAAAPSSG-- 208
Query: 630 VVRRQEFSSSYSELEKNAWIRPQPCEEDCSCCFPSTSLIPWSQ 502
V S+ E + W P+PC+E+C CCFP S IPWSQ
Sbjct: 209 -VYGLPHESNQRETPASNWDLPEPCQENCECCFPPMSAIPWSQ 250
Score = 105 bits (261), Expect(2) = 4e-58
Identities = 49/58 (84%), Positives = 52/58 (89%)
Frame = -2
Query: 1040 QLQGWSNRLYRDEVVAEWKKVKGKMSLHVHCHISGGHSLLNFFARLRFFIFYKELPVV 867
QLQGW N+LYRDEVVAEWKKVK KMSLHVHCHISGGH LL+ ARLR+FIF KELPVV
Sbjct: 99 QLQGWYNKLYRDEVVAEWKKVKEKMSLHVHCHISGGHFLLDLCARLRYFIFCKELPVV 156
>ref|NP_001234723.1| senescence-inducible chloroplast stay-green protein 1 [Solanum
lycopersicum] gi|68510418|gb|AAY98500.1|
senescence-inducible chloroplast stay-green protein 1
[Solanum lycopersicum] gi|171903870|gb|ACB56587.1| green
flesh protein [Solanum lycopersicum]
gi|257480000|gb|ACV60215.1| green flesh protein [Solanum
lycopersicum]
Length = 272
Score = 147 bits (370), Expect(2) = 5e-58
Identities = 68/110 (61%), Positives = 82/110 (74%), Gaps = 1/110 (0%)
Frame = -1
Query: 810 KELPVVLKAFVHGDVNLFQNYPELEDALVWVYFHSNIHEFNRVECWGPLKDAAAPSDEGG 631
KELPVVLKAFVHGD NL +NYPEL++ALVWVYFHSNI EFN+VECWGPL+DA +PS G
Sbjct: 149 KELPVVLKAFVHGDENLLRNYPELQEALVWVYFHSNIQEFNKVECWGPLRDATSPSSSSG 208
Query: 630 VVRRQEFSSSYSELEKNAWIRPQPCEEDCSCCFPSTSLIPW-SQNLSEQG 484
V + S+S++ W P+PCEE C+CCFP S++PW S NL G
Sbjct: 209 GVGGVK-STSFTSNSNKKWELPKPCEEACACCFPPVSVMPWLSSNLDGVG 257
Score = 105 bits (261), Expect(2) = 5e-58
Identities = 49/58 (84%), Positives = 52/58 (89%)
Frame = -2
Query: 1040 QLQGWSNRLYRDEVVAEWKKVKGKMSLHVHCHISGGHSLLNFFARLRFFIFYKELPVV 867
QLQGW NRL RDEVVAEWKKVKGKMSLHVHCHISGGH +L+ FARLR +IF KELPVV
Sbjct: 97 QLQGWYNRLQRDEVVAEWKKVKGKMSLHVHCHISGGHFMLDLFARLRNYIFCKELPVV 154
>gb|ABX82698.1| stay green protein [Capsicum annuum] gi|170947249|emb|CAN88917.2|
chlorophyll retainer (stay green) [Capsicum annuum]
gi|171903868|gb|ACB56586.1| chlorophyll retainer
[Capsicum annuum]
Length = 266
Score = 143 bits (361), Expect(2) = 1e-57
Identities = 65/101 (64%), Positives = 76/101 (75%)
Frame = -1
Query: 810 KELPVVLKAFVHGDVNLFQNYPELEDALVWVYFHSNIHEFNRVECWGPLKDAAAPSDEGG 631
KELPVVLKAFVHGD NL +NYPEL+ ALVWVYFHSNI EFN+VECWGPLKDAA+PS G
Sbjct: 149 KELPVVLKAFVHGDENLLKNYPELQQALVWVYFHSNIQEFNKVECWGPLKDAASPSSSG- 207
Query: 630 VVRRQEFSSSYSELEKNAWIRPQPCEEDCSCCFPSTSLIPW 508
++S++ W P+PCEE C+CCFP S+IPW
Sbjct: 208 --VGGGMNTSFTSNSNIKWNLPKPCEETCTCCFPPMSVIPW 246
Score = 107 bits (267), Expect(2) = 1e-57
Identities = 49/58 (84%), Positives = 53/58 (91%)
Frame = -2
Query: 1040 QLQGWSNRLYRDEVVAEWKKVKGKMSLHVHCHISGGHSLLNFFARLRFFIFYKELPVV 867
QLQGW NRL RDEVVAEWKKVKGKMSLHVHCHISGGH +L+ FARLR++IF KELPVV
Sbjct: 97 QLQGWYNRLQRDEVVAEWKKVKGKMSLHVHCHISGGHFMLDLFARLRYYIFCKELPVV 154