BLASTX nr result

ID: Coptis21_contig00017218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017218
         (1311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631841.1| PREDICTED: glutamate receptor 2.8-like [Viti...   477   e-132
emb|CBI23992.3| unnamed protein product [Vitis vinifera]              477   e-132
emb|CAN75545.1| hypothetical protein VITISV_032974 [Vitis vinifera]   471   e-130
ref|XP_002324368.1| glutamate-gated kainate-type ion channel rec...   459   e-127
emb|CAN80118.1| hypothetical protein VITISV_005870 [Vitis vinifera]   457   e-126

>ref|XP_003631841.1| PREDICTED: glutamate receptor 2.8-like [Vitis vinifera]
          Length = 983

 Score =  477 bits (1228), Expect = e-132
 Identities = 232/437 (53%), Positives = 312/437 (71%), Gaps = 2/437 (0%)
 Frame = +3

Query: 6    FGLWAYDTIWALAMAAERVGDMKTNSLRLESDRNFTDVLGMGVSQTGPKLLEEILKIKFE 185
            FGLWAYD   ALAMA E+VG    +  +     N TD+  +GVSQ GPKLL+ +L  KF+
Sbjct: 318  FGLWAYDAASALAMAVEKVGATNLSFQKTNISSNSTDLDTIGVSQIGPKLLQSLLSTKFK 377

Query: 186  GLSGEFHLVNGQLQPSAFRILNVVGKGGRDVGFWTSKHGISRDLMNLNSEG-PYSTSAEH 362
            GLSG+F + +GQL P+AF+I+NV+GKG R +GFWT K+GI R L   N+    YSTS ++
Sbjct: 378  GLSGDFQIFDGQLHPTAFQIVNVIGKGERGIGFWTPKNGIIRRLKFTNANSNTYSTSKDN 437

Query: 363  FRVIIWPGESTTVPKGWAIPMNGKKLRIGVPVPEGFSELVNVEKDPYTNSTRVTGYCIDV 542
               I+WPGE T  PKGW +P+N KKL+IGVPV +GFSE V V  DP TN+T+VTGYCIDV
Sbjct: 438  LGAIVWPGEPTYFPKGWVLPVNEKKLKIGVPVKDGFSEFVKVTWDPNTNATKVTGYCIDV 497

Query: 543  FKSAIESLPYTLPYEFVPFQREDGKSAGSYNDLIYQVHLKNYDAVVGDITITANRSLYVD 722
            F + + SLPY +PYE++PF   DGK AG+YNDLIYQV LK YDAVVGD TI ANRS YVD
Sbjct: 498  FDAVMGSLPYAVPYEYIPFGTPDGKPAGNYNDLIYQVFLKKYDAVVGDTTIVANRSNYVD 557

Query: 723  FAFPYTDGGVWMVVPLKQHEETKTTWMFFQPLTREIWIISMVFFIFTGFLVWILEHGIGC 902
            F  PYT+ GV M+VP+K + ++K+ W+F +PLT ++W+ S  FF+F GF++W+LEH I  
Sbjct: 558  FTLPYTESGVSMIVPIKDN-KSKSAWIFLKPLTWDLWVTSACFFVFIGFVIWVLEHRINE 616

Query: 903  NLRSASLYDPVRKILSFTLS-IIAPYRKKFSTILSTLMVILWLFLILGLTSHYVVSLTSM 1079
            + R    +  V  I  F+ S ++   +++  + L+  ++I+W F++L LT  Y  SLTSM
Sbjct: 617  DFRGPPSHQ-VGTIFWFSFSTMVFAQKERIVSNLARFVMIIWFFVVLILTQSYTASLTSM 675

Query: 1080 LTVDRLEPTITDFNDLIRNGDFVGYRKGTFIVDLLKRFHFDESKLRSYNSPEECHELLSA 1259
            LTV +L+PT+TD  +L    ++VGY++G+F++  LKR +FDESK R YNSPEE  EL+S 
Sbjct: 676  LTVQQLQPTVTDIKELRAKDEYVGYQQGSFVLGFLKRMNFDESKFRIYNSPEELAELISK 735

Query: 1260 GSQNGGVAAVFDEMPYI 1310
            GS NGG+AA FDE+PY+
Sbjct: 736  GSANGGIAAAFDEIPYM 752


>emb|CBI23992.3| unnamed protein product [Vitis vinifera]
          Length = 990

 Score =  477 bits (1228), Expect = e-132
 Identities = 232/437 (53%), Positives = 312/437 (71%), Gaps = 2/437 (0%)
 Frame = +3

Query: 6    FGLWAYDTIWALAMAAERVGDMKTNSLRLESDRNFTDVLGMGVSQTGPKLLEEILKIKFE 185
            FGLWAYD   ALAMA E+VG    +  +     N TD+  +GVSQ GPKLL+ +L  KF+
Sbjct: 318  FGLWAYDAASALAMAVEKVGATNLSFQKTNISSNSTDLDTIGVSQIGPKLLQSLLSTKFK 377

Query: 186  GLSGEFHLVNGQLQPSAFRILNVVGKGGRDVGFWTSKHGISRDLMNLNSEG-PYSTSAEH 362
            GLSG+F + +GQL P+AF+I+NV+GKG R +GFWT K+GI R L   N+    YSTS ++
Sbjct: 378  GLSGDFQIFDGQLHPTAFQIVNVIGKGERGIGFWTPKNGIIRRLKFTNANSNTYSTSKDN 437

Query: 363  FRVIIWPGESTTVPKGWAIPMNGKKLRIGVPVPEGFSELVNVEKDPYTNSTRVTGYCIDV 542
               I+WPGE T  PKGW +P+N KKL+IGVPV +GFSE V V  DP TN+T+VTGYCIDV
Sbjct: 438  LGAIVWPGEPTYFPKGWVLPVNEKKLKIGVPVKDGFSEFVKVTWDPNTNATKVTGYCIDV 497

Query: 543  FKSAIESLPYTLPYEFVPFQREDGKSAGSYNDLIYQVHLKNYDAVVGDITITANRSLYVD 722
            F + + SLPY +PYE++PF   DGK AG+YNDLIYQV LK YDAVVGD TI ANRS YVD
Sbjct: 498  FDAVMGSLPYAVPYEYIPFGTPDGKPAGNYNDLIYQVFLKKYDAVVGDTTIVANRSNYVD 557

Query: 723  FAFPYTDGGVWMVVPLKQHEETKTTWMFFQPLTREIWIISMVFFIFTGFLVWILEHGIGC 902
            F  PYT+ GV M+VP+K + ++K+ W+F +PLT ++W+ S  FF+F GF++W+LEH I  
Sbjct: 558  FTLPYTESGVSMIVPIKDN-KSKSAWIFLKPLTWDLWVTSACFFVFIGFVIWVLEHRINE 616

Query: 903  NLRSASLYDPVRKILSFTLS-IIAPYRKKFSTILSTLMVILWLFLILGLTSHYVVSLTSM 1079
            + R    +  V  I  F+ S ++   +++  + L+  ++I+W F++L LT  Y  SLTSM
Sbjct: 617  DFRGPPSHQ-VGTIFWFSFSTMVFAQKERIVSNLARFVMIIWFFVVLILTQSYTASLTSM 675

Query: 1080 LTVDRLEPTITDFNDLIRNGDFVGYRKGTFIVDLLKRFHFDESKLRSYNSPEECHELLSA 1259
            LTV +L+PT+TD  +L    ++VGY++G+F++  LKR +FDESK R YNSPEE  EL+S 
Sbjct: 676  LTVQQLQPTVTDIKELRAKDEYVGYQQGSFVLGFLKRMNFDESKFRIYNSPEELAELISK 735

Query: 1260 GSQNGGVAAVFDEMPYI 1310
            GS NGG+AA FDE+PY+
Sbjct: 736  GSANGGIAAAFDEIPYM 752


>emb|CAN75545.1| hypothetical protein VITISV_032974 [Vitis vinifera]
          Length = 960

 Score =  471 bits (1211), Expect = e-130
 Identities = 229/437 (52%), Positives = 308/437 (70%), Gaps = 2/437 (0%)
 Frame = +3

Query: 6    FGLWAYDTIWALAMAAERVGDMKTNSLRLESDRNFTDVLGMGVSQTGPKLLEEILKIKFE 185
            FGLWAYD   ALAMA E+VG    +  +     N TD+  +GVSQ GPKLL+ +L  KF+
Sbjct: 318  FGLWAYDAASALAMAVEKVGATNLSFQKTNISSNSTDLDTIGVSQIGPKLLQSLLSTKFK 377

Query: 186  GLSGEFHLVNGQLQPSAFRILNVVGKGGRDVGFWTSKHGISRDLMNLNSEG-PYSTSAEH 362
            GLSG+F + +GQL P+AF+I+NV+GKG R +GFWT K+GI R L   N+    YSTS ++
Sbjct: 378  GLSGDFQIFDGQLHPTAFQIVNVIGKGERGIGFWTPKNGIIRRLKFTNANSNTYSTSKDN 437

Query: 363  FRVIIWPGESTTVPKGWAIPMNGKKLRIGVPVPEGFSELVNVEKDPYTNSTRVTGYCIDV 542
               I+WPGE T  PKGW +P+N KKL+IGVPV +GFSE V V  DP TN+T+V GYCIDV
Sbjct: 438  LGAIVWPGEPTYFPKGWVLPVNEKKLKIGVPVKDGFSEFVKVTWDPNTNATKVAGYCIDV 497

Query: 543  FKSAIESLPYTLPYEFVPFQREDGKSAGSYNDLIYQVHLKNYDAVVGDITITANRSLYVD 722
            F + + SLPY +PYE++PF   DGK AG+YNDL+YQV LK YDAVVGD TI ANRS YVD
Sbjct: 498  FDAVMSSLPYAVPYEYIPFGTPDGKPAGNYNDLLYQVFLKKYDAVVGDTTIVANRSNYVD 557

Query: 723  FAFPYTDGGVWMVVPLKQHEETKTTWMFFQPLTREIWIISMVFFIFTGFLVWILEHGIGC 902
            F  PYT+ GV M+VP+K + ++K+ W+F +PLT  +W+ S  FF+F GF++W+LEH I  
Sbjct: 558  FTLPYTESGVSMIVPIKDN-KSKSAWIFLKPLTWGLWVTSACFFVFIGFVIWVLEHRINE 616

Query: 903  NLRSASLYDPVRKILSFTLS-IIAPYRKKFSTILSTLMVILWLFLILGLTSHYVVSLTSM 1079
            + R    +     I  F+ S ++   +++  + L+  ++I+W F++L LT  Y  SLTSM
Sbjct: 617  DFRGPPSHQ-AGTIFWFSFSTMVFAQKERIVSNLARFVMIIWFFVVLILTQSYTASLTSM 675

Query: 1080 LTVDRLEPTITDFNDLIRNGDFVGYRKGTFIVDLLKRFHFDESKLRSYNSPEECHELLSA 1259
            LTV +L+PT+TD  +L   G++VGY++G+F++  LKR +FDESK R YNS E   ELLS 
Sbjct: 676  LTVQQLQPTVTDIKELRAKGEYVGYQQGSFVLGFLKRMNFDESKFRIYNSSENLAELLSK 735

Query: 1260 GSQNGGVAAVFDEMPYI 1310
            GS NGG+AA FDE+PY+
Sbjct: 736  GSANGGIAAAFDEIPYM 752


>ref|XP_002324368.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222865802|gb|EEF02933.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 885

 Score =  459 bits (1180), Expect = e-127
 Identities = 221/436 (50%), Positives = 304/436 (69%), Gaps = 1/436 (0%)
 Frame = +3

Query: 6    FGLWAYDTIWALAMAAERVGDMKTNSLRLE-SDRNFTDVLGMGVSQTGPKLLEEILKIKF 182
            FGLWAYD   ALA+A E+ G       +   S  + TD+  +GVS  GP L++ +  I F
Sbjct: 289  FGLWAYDAATALALAVEKAGTANLGFQKANVSSNSSTDLATLGVSLNGPNLVQALSNITF 348

Query: 183  EGLSGEFHLVNGQLQPSAFRILNVVGKGGRDVGFWTSKHGISRDLMNLNSEGPYSTSAEH 362
            +GL+G++   NGQLQ SAF+I+NV G GGR++GFWTS  GI + L + N+   YS S   
Sbjct: 349  KGLTGDYLFDNGQLQSSAFQIINVNGNGGREIGFWTSTKGIVKTLNSANNMTAYSGSNSD 408

Query: 363  FRVIIWPGESTTVPKGWAIPMNGKKLRIGVPVPEGFSELVNVEKDPYTNSTRVTGYCIDV 542
               +IWPG++T+VPKGW IP NGKKLRIGVPV +GFSE V V +DP +N+  VTGY IDV
Sbjct: 409  LSTVIWPGDTTSVPKGWEIPTNGKKLRIGVPVKDGFSEFVKVTRDPSSNTKTVTGYSIDV 468

Query: 543  FKSAIESLPYTLPYEFVPFQREDGKSAGSYNDLIYQVHLKNYDAVVGDITITANRSLYVD 722
            F S +++LPY LPYE++PF + DG++AG+YNDLIYQV+LKN+DAVVGD TI  NRS YVD
Sbjct: 469  FDSVVKALPYALPYEYIPFAKPDGETAGTYNDLIYQVYLKNFDAVVGDTTIVFNRSQYVD 528

Query: 723  FAFPYTDGGVWMVVPLKQHEETKTTWMFFQPLTREIWIISMVFFIFTGFLVWILEHGIGC 902
            F  PYT+ GV M+VP+  +  +K  W+F +PLT ++W+ S  FFIF GF++WILEH I  
Sbjct: 529  FTLPYTESGVSMIVPIVDN-NSKNAWVFLRPLTWDLWVTSFCFFIFIGFVIWILEHRINE 587

Query: 903  NLRSASLYDPVRKILSFTLSIIAPYRKKFSTILSTLMVILWLFLILGLTSHYVVSLTSML 1082
            + R  +L+           +++   R+   + LS  +V++W F++L LT  Y  SLTS+L
Sbjct: 588  DFRGPALHQAGTSFWFSFSTMVFAQREIVVSNLSRAVVLIWCFVVLILTQSYTASLTSLL 647

Query: 1083 TVDRLEPTITDFNDLIRNGDFVGYRKGTFIVDLLKRFHFDESKLRSYNSPEECHELLSAG 1262
            TV +L PT+TD ++LI+ G++VGY++G+F++ +L    FDESKL  YNS E+C +LLS G
Sbjct: 648  TVQQLRPTVTDVHELIKKGEYVGYQEGSFVLGILLDLGFDESKLIVYNSTEQCDDLLSKG 707

Query: 1263 SQNGGVAAVFDEMPYI 1310
            S NGG+AA FDE+PY+
Sbjct: 708  SGNGGIAAAFDEVPYM 723


>emb|CAN80118.1| hypothetical protein VITISV_005870 [Vitis vinifera]
          Length = 978

 Score =  457 bits (1175), Expect = e-126
 Identities = 230/438 (52%), Positives = 305/438 (69%), Gaps = 3/438 (0%)
 Frame = +3

Query: 6    FGLWAYDTIWALAMAAERVGDMKTNSLRLESDRNFTDVLGMGVSQTGPKLLEEILKIKFE 185
            FGLWAYD   ALAMA E+VG    +  +     N   +  + VSQ G  LL+ +L  K +
Sbjct: 319  FGLWAYDAASALAMAVEKVGTTNFSFQKTNISSNSMVLDTIRVSQIGTNLLQSLLSTKLK 378

Query: 186  GLSGEFHLVNGQLQPSAFRILNVVGKGGRDVGFWTSKHGISRDL--MNLNSEGPYSTSAE 359
            GLSG F + +GQL  +AF I+NV+GKG R VGFWT K+GI R L   + NS+  YSTS +
Sbjct: 379  GLSGYFQIFDGQLHSTAFEIVNVIGKGERGVGFWTPKNGIIRRLNFSHTNSK-TYSTSKD 437

Query: 360  HFRVIIWPGESTTVPKGWAIPMNGKKLRIGVPVPEGFSELVNVEKDPYTNSTRVTGYCID 539
            +   I+WPGE T VPKGW +P+N KKLRIGVPV  GFSE VNV  DP TN++ VTGYCID
Sbjct: 438  NLGTIVWPGEPTYVPKGWVLPVNEKKLRIGVPVKNGFSEFVNVTWDPKTNASNVTGYCID 497

Query: 540  VFKSAIESLPYTLPYEFVPFQREDGKSAGSYNDLIYQVHLKNYDAVVGDITITANRSLYV 719
            VF + + SLPY +P+E++PF   DGKSAGSYNDLIYQV LKNYDAVVGDITI ANRS YV
Sbjct: 498  VFDAVMGSLPYAVPHEYIPFGTPDGKSAGSYNDLIYQVFLKNYDAVVGDITIVANRSKYV 557

Query: 720  DFAFPYTDGGVWMVVPLKQHEETKTTWMFFQPLTREIWIISMVFFIFTGFLVWILEHGIG 899
            DF  PYT+ GV M+VP+K + ++K+ W+F +PLT ++W+ S  FF+F GF++W+LEH I 
Sbjct: 558  DFTLPYTESGVSMIVPIKDN-KSKSAWIFLKPLTWDLWVTSACFFVFIGFVIWVLEHRIN 616

Query: 900  CNLRSASLYDPVRKILSFTLS-IIAPYRKKFSTILSTLMVILWLFLILGLTSHYVVSLTS 1076
             + R    +     I  F+ S ++   +++  + L+  ++I+W F++L LT  Y  SLTS
Sbjct: 617  EDFRGPHSHQ-AGTIFWFSFSTMVFAQKERIVSNLARFVMIIWFFVLLILTQSYTASLTS 675

Query: 1077 MLTVDRLEPTITDFNDLIRNGDFVGYRKGTFIVDLLKRFHFDESKLRSYNSPEECHELLS 1256
            MLTV +L PT+TD  +L   G++VGY++ +F+++ LKR  FDESK R YNS E+  ELLS
Sbjct: 676  MLTVQKLRPTVTDIKELQAKGEYVGYQQDSFVLEFLKRMKFDESKFRIYNSSEKLAELLS 735

Query: 1257 AGSQNGGVAAVFDEMPYI 1310
             GS NGG+AA FDE+PY+
Sbjct: 736  KGSANGGIAAAFDEIPYM 753