BLASTX nr result

ID: Coptis21_contig00017215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017215
         (622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264175.1| PREDICTED: probable cytochrome b5 isoform 2 ...   136   3e-30
ref|XP_002893406.1| B5 #6 [Arabidopsis lyrata subsp. lyrata] gi|...   128   1e-27
gb|AAT84461.1| cytochrome b5 isoform Cb5-D [Vernicia fordii]          128   1e-27
gb|EAY91897.1| hypothetical protein OsI_13549 [Oryza sativa Indi...   126   4e-27
ref|NP_173958.1| cytochrome B5 isoform A [Arabidopsis thaliana] ...   125   5e-27

>ref|XP_002264175.1| PREDICTED: probable cytochrome b5 isoform 2 [Vitis vinifera]
           gi|297738108|emb|CBI27309.3| unnamed protein product
           [Vitis vinifera]
          Length = 134

 Score =  136 bits (343), Expect = 3e-30
 Identities = 59/78 (75%), Positives = 71/78 (91%)
 Frame = -1

Query: 484 MPTLTKLFNLKEAGEHNTRDDCWVVIDGKVYDVTTYLDEHPGGDDVLLNSTGRDATEDFN 305
           MPTLTKLF+++EA  HN++DDCWVVIDGKVYDVTTYLDEHPGGDDV+L +TG+DAT+DF 
Sbjct: 1   MPTLTKLFSMQEASLHNSKDDCWVVIDGKVYDVTTYLDEHPGGDDVILATTGKDATDDFE 60

Query: 304 DAGHSRDAIQLMQEFCIG 251
           DAGHS DA +LM+ FC+G
Sbjct: 61  DAGHSNDARELMKSFCVG 78


>ref|XP_002893406.1| B5 #6 [Arabidopsis lyrata subsp. lyrata]
           gi|297339248|gb|EFH69665.1| B5 #6 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 135

 Score =  128 bits (321), Expect = 1e-27
 Identities = 61/114 (53%), Positives = 78/114 (68%), Gaps = 3/114 (2%)
 Frame = -1

Query: 484 MPTLTKLFNLKEAGEHNTRDDCWVVIDGKVYDVTTYLDEHPGGDDVLLNSTGRDATEDFN 305
           MPTLTKL++++E   HN +DDCWVVIDGKVYDVT+Y+DEHPGGDDVLL  TG+DAT+DF 
Sbjct: 1   MPTLTKLYSMEEVATHNKQDDCWVVIDGKVYDVTSYMDEHPGGDDVLLAVTGKDATDDFE 60

Query: 304 DAGHSRDAIQLMQEFCIGXXXXXXXXXXXXXXXXXXXXXXEI---LMDMTSQYW 152
           DAGHS+DA +LM+++ IG                      +    L+D+T QYW
Sbjct: 61  DAGHSKDARELMEKYFIGELDESSLPEIPELKIYKKEQPTDSVQKLVDLTKQYW 114


>gb|AAT84461.1| cytochrome b5 isoform Cb5-D [Vernicia fordii]
          Length = 134

 Score =  128 bits (321), Expect = 1e-27
 Identities = 64/136 (47%), Positives = 83/136 (61%), Gaps = 2/136 (1%)
 Frame = -1

Query: 484 MPTLTKLFNLKEAGEHNTRDDCWVVIDGKVYDVTTYLDEHPGGDDVLLNSTGRDATEDFN 305
           MPTLTKLF ++EA +HNT++DCW+VIDGKVYDV++YLDEHPGGDDV+L++ G+DAT+DF 
Sbjct: 1   MPTLTKLFTMQEAAQHNTKEDCWIVIDGKVYDVSSYLDEHPGGDDVILSTIGKDATDDFE 60

Query: 304 DAGHSRDAIQLMQEFCIGXXXXXXXXXXXXXXXXXXXXXXEI--LMDMTSQYWXXXXXXX 131
           DAGHS+ A + ++ F IG                       +  L D+T QYW       
Sbjct: 61  DAGHSKSAREQLESFFIGELDPSVPVIPELEIYSKKQPAEYVQKLKDLTKQYW--AVPVA 118

Query: 130 XXXXXXXXXVLYLRKK 83
                     LYLRKK
Sbjct: 119 IVGISVVVGFLYLRKK 134


>gb|EAY91897.1| hypothetical protein OsI_13549 [Oryza sativa Indica Group]
           gi|125587957|gb|EAZ28621.1| hypothetical protein
           OsJ_12608 [Oryza sativa Japonica Group]
          Length = 196

 Score =  126 bits (316), Expect = 4e-27
 Identities = 54/85 (63%), Positives = 71/85 (83%)
 Frame = -1

Query: 505 KKRRKKNMPTLTKLFNLKEAGEHNTRDDCWVVIDGKVYDVTTYLDEHPGGDDVLLNSTGR 326
           ++ R++ MPTLTKL++L++A  HNT DDCWVV+DGK+YDVT YLD+HPGG DVLL  TG+
Sbjct: 57  QREREEEMPTLTKLYSLEDAARHNTADDCWVVVDGKIYDVTKYLDDHPGGADVLLEVTGK 116

Query: 325 DATEDFNDAGHSRDAIQLMQEFCIG 251
           DA E+F+DAGHS  A +LMQ++ IG
Sbjct: 117 DAKEEFDDAGHSESAKELMQDYFIG 141


>ref|NP_173958.1| cytochrome B5 isoform A [Arabidopsis thaliana]
           gi|9797763|gb|AAF98581.1|AC013427_24 Strong similarity
           to cytochrome b5 from Oryza sativa gb|X75670 and
           contains a Heme-binding PF|00173 domain. EST gb|AV536831
           comes from this gene [Arabidopsis thaliana]
           gi|12083238|gb|AAG48778.1|AF332415_1 putative cytochrome
           b5 protein [Arabidopsis thaliana]
           gi|12321181|gb|AAG50683.1|AC079829_16 cytochrome b5
           [Arabidopsis thaliana] gi|21536989|gb|AAM61330.1|
           cytochrome b5 [Arabidopsis thaliana]
           gi|26450007|dbj|BAC42124.1| putative cytochrome b5
           [Arabidopsis thaliana] gi|332192558|gb|AEE30679.1|
           cytochrome B5 isoform A [Arabidopsis thaliana]
          Length = 135

 Score =  125 bits (315), Expect = 5e-27
 Identities = 60/114 (52%), Positives = 77/114 (67%), Gaps = 3/114 (2%)
 Frame = -1

Query: 484 MPTLTKLFNLKEAGEHNTRDDCWVVIDGKVYDVTTYLDEHPGGDDVLLNSTGRDATEDFN 305
           MPTLTKL++++EA  HN +DDCWVVIDGKVYDV++Y+DEHPGGDDVLL   G+DAT+DF 
Sbjct: 1   MPTLTKLYSMEEAATHNKQDDCWVVIDGKVYDVSSYMDEHPGGDDVLLAVAGKDATDDFE 60

Query: 304 DAGHSRDAIQLMQEFCIGXXXXXXXXXXXXXXXXXXXXXXEI---LMDMTSQYW 152
           DAGHS+DA +LM+++ IG                      +    L D+T QYW
Sbjct: 61  DAGHSKDARELMEKYFIGELDESSLPEIPELKIYKKDQPQDSVQKLFDLTKQYW 114


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