BLASTX nr result

ID: Coptis21_contig00017208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017208
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16338.3| unnamed protein product [Vitis vinifera]               69   4e-10
emb|CAN64222.1| hypothetical protein VITISV_037395 [Vitis vinifera]    69   4e-10

>emb|CBI16338.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 43/88 (48%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
 Frame = +3

Query: 117 TRSGCKLKDVG-NNSKGEHIGIKGSTASGSTISDTSILRRSTRETPSNKQRDSSPLSTRK 293
           +R+  K KD   NNSKG +I  KGS+ S S  +D S LRRS RETP+ K  + SP STRK
Sbjct: 5   SRTSRKTKDDDINNSKGRNIRGKGSSTSASATTDISGLRRSARETPTKKLLNPSPSSTRK 64

Query: 294 SXXXXXXXXXXXXXXXXSERVEKQKMPS 377
           S                SERVEKQ+MPS
Sbjct: 65  SERLEKQTPVTPPVKRKSERVEKQRMPS 92


>emb|CAN64222.1| hypothetical protein VITISV_037395 [Vitis vinifera]
          Length = 1179

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 43/88 (48%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
 Frame = +3

Query: 117 TRSGCKLKDVG-NNSKGEHIGIKGSTASGSTISDTSILRRSTRETPSNKQRDSSPLSTRK 293
           +R+  K KD   NNSKG +I  KGS+ S S  +D S LRRS RETP+ K  + SP STRK
Sbjct: 117 SRTSRKTKDDDINNSKGRNIRGKGSSTSASATTDISGLRRSARETPTKKLLNPSPSSTRK 176

Query: 294 SXXXXXXXXXXXXXXXXSERVEKQKMPS 377
           S                SERVEKQ+MPS
Sbjct: 177 SERLEKQTPVTPPVKRKSERVEKQRMPS 204


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