BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017203
         (1307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFL55357.1| Fanconia anemia complementation group M-like prot...   456   e-126
ref|XP_002526811.1| protein with unknown function [Ricinus commu...   455   e-125
ref|NP_174785.1| fanconi anemia group M protein [Arabidopsis tha...   454   e-125
ref|NP_001185141.1| fanconi anemia group M protein [Arabidopsis ...   454   e-125
ref|XP_002891189.1| hypothetical protein ARALYDRAFT_473682 [Arab...   452   e-125

>gb|AFL55357.1| Fanconia anemia complementation group M-like protein [Arabidopsis
            thaliana]
          Length = 1344

 Score =  456 bits (1172), Expect = e-126
 Identities = 235/358 (65%), Positives = 267/358 (74%), Gaps = 12/358 (3%)
 Frame = -2

Query: 1039 VSIMNDDDEFDWEAAVKAIDVAC--------QERXXXXXXXXXXXXXXXXXXXXSRQSTL 884
            +  + +D EFDWEAAVK ID+AC                                RQSTL
Sbjct: 7    IETIEEDGEFDWEAAVKEIDLACLKTTNASSSSSSHFTPLANPPITANLTKPPAKRQSTL 66

Query: 883  DSFIQRKNQSTTHSQVVGN--EESNNLGCYCAIDLEAAKTWIYPVN--IPLRDYQLSITK 716
            D FI R      + QVV       N+      ID EAAKTWIYPVN  +PLRDYQ +ITK
Sbjct: 67   DKFIGRTEHKPENHQVVSECGVNDNDNSPLVGIDPEAAKTWIYPVNGSVPLRDYQFAITK 126

Query: 715  TALFANTLVALPTGLGKTLIAAVVMYNYFRWFPEGKIVFAAPSRPLVLQQIEACHNTVGI 536
            TALF+NTLVALPTGLGKTLIAAVVMYNYFRWFP+GKIVFAAPSRPLV+QQIEACHN VGI
Sbjct: 127  TALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPQGKIVFAAPSRPLVMQQIEACHNIVGI 186

Query: 535  PQEWAIDLTGQTSPSKRAYLWKAKRVFFVTPQVLEKDIQSGTCLVKHLVCLVIDEAHRAS 356
            PQEW IDLTGQT PSKRA+LWK+KRVFFVTPQVLEKDIQSGTCL  +LVCLVIDEAHRA 
Sbjct: 187  PQEWTIDLTGQTCPSKRAFLWKSKRVFFVTPQVLEKDIQSGTCLTNYLVCLVIDEAHRAL 246

Query: 355  GNYSYCVAVRELMAVPLQFRILALTATPGSKQQAIQKVIDNLQISKLEYRTETDDDVSPY 176
            GNYSYCV VRELMAVP+Q RILALTATPGSK QAIQ +IDNLQIS LEYR E+D DV PY
Sbjct: 247  GNYSYCVVVRELMAVPIQLRILALTATPGSKTQAIQGIIDNLQISTLEYRNESDHDVCPY 306

Query: 175  VHNRKLELVKVPMGKDAVETNDMILEAIRPFVTKLTSFGVHLNRDSQTLSPCDLLNTR 2
            VH+RKLE+++VP+G+DA + +  +   IRP+  +L +FGV+LNRD QTLSP ++L  R
Sbjct: 307  VHDRKLEVIEVPLGQDADDVSKRLFHVIRPYAVRLKNFGVNLNRDIQTLSPHEVLMAR 364


>ref|XP_002526811.1| protein with unknown function [Ricinus communis]
            gi|223533815|gb|EEF35546.1| protein with unknown function
            [Ricinus communis]
          Length = 1351

 Score =  455 bits (1171), Expect = e-125
 Identities = 235/349 (67%), Positives = 269/349 (77%), Gaps = 8/349 (2%)
 Frame = -2

Query: 1024 DDDEFDWEAAVKAIDVAC-----QERXXXXXXXXXXXXXXXXXXXXSRQSTLDSFIQ--- 869
            DDDEFDWEAAV+ IDVAC     Q                       +QSTL+ FI    
Sbjct: 14   DDDEFDWEAAVREIDVACENANLQTEPSSSRSENNLSNVILKKPGACKQSTLERFIGKTV 73

Query: 868  RKNQSTTHSQVVGNEESNNLGCYCAIDLEAAKTWIYPVNIPLRDYQLSITKTALFANTLV 689
            R +    +  V+ +E  N + C   ID EAAKTWIYPVN+P+RDYQL+ITKTALF+NTLV
Sbjct: 74   RPDPPPGNPTVIDDE--NGVSCI-EIDAEAAKTWIYPVNVPVRDYQLAITKTALFSNTLV 130

Query: 688  ALPTGLGKTLIAAVVMYNYFRWFPEGKIVFAAPSRPLVLQQIEACHNTVGIPQEWAIDLT 509
            ALPTGLGKTLIAAVVMYNYFRWFP+GKIVFAAPSRPLV+QQIEACHN VGIPQEW ID+T
Sbjct: 131  ALPTGLGKTLIAAVVMYNYFRWFPDGKIVFAAPSRPLVMQQIEACHNIVGIPQEWTIDMT 190

Query: 508  GQTSPSKRAYLWKAKRVFFVTPQVLEKDIQSGTCLVKHLVCLVIDEAHRASGNYSYCVAV 329
            GQ SP+KRA  WK KR+FFVTPQVLEKDIQ+GTCLVKHLVCLVIDEAHRA GNYSYCVAV
Sbjct: 191  GQLSPAKRACFWKTKRMFFVTPQVLEKDIQAGTCLVKHLVCLVIDEAHRALGNYSYCVAV 250

Query: 328  RELMAVPLQFRILALTATPGSKQQAIQKVIDNLQISKLEYRTETDDDVSPYVHNRKLELV 149
             ELMAVP+Q RILALTATPGSKQQAIQ +IDNL IS LEYR E D DV PYVHNRK+EL+
Sbjct: 251  CELMAVPIQLRILALTATPGSKQQAIQHIIDNLHISTLEYRNEGDADVVPYVHNRKIELI 310

Query: 148  KVPMGKDAVETNDMILEAIRPFVTKLTSFGVHLNRDSQTLSPCDLLNTR 2
            +V +GKDAV+ N  +L  I P+V +L++ G+  NRD +T+ P DLLN+R
Sbjct: 311  EVALGKDAVDINKQLLAVIHPYVARLSAVGLLQNRDYKTVCPPDLLNSR 359


>ref|NP_174785.1| fanconi anemia group M protein [Arabidopsis thaliana]
            gi|332193685|gb|AEE31806.1| fanconi anemia group M
            protein [Arabidopsis thaliana]
          Length = 1324

 Score =  454 bits (1169), Expect = e-125
 Identities = 233/356 (65%), Positives = 265/356 (74%), Gaps = 10/356 (2%)
 Frame = -2

Query: 1039 VSIMNDDDEFDWEAAVKAIDVAC--------QERXXXXXXXXXXXXXXXXXXXXSRQSTL 884
            +  + +D EFDWEAAVK ID+AC                                RQSTL
Sbjct: 7    IETIEEDGEFDWEAAVKEIDLACLKTTNASSSSSSHFTPLANPPITANLTKPPAKRQSTL 66

Query: 883  DSFIQRKNQSTTHSQVVGN--EESNNLGCYCAIDLEAAKTWIYPVNIPLRDYQLSITKTA 710
            D FI R      + QVV       N+      ID EAAKTWIYP  +PLRDYQ +ITKTA
Sbjct: 67   DKFIGRTEHKPENHQVVSECGVNDNDNSPLVGIDPEAAKTWIYPGFVPLRDYQFAITKTA 126

Query: 709  LFANTLVALPTGLGKTLIAAVVMYNYFRWFPEGKIVFAAPSRPLVLQQIEACHNTVGIPQ 530
            LF+NTLVALPTGLGKTLIAAVVMYNYFRWFP+GKIVFAAPSRPLV+QQIEACHN VGIPQ
Sbjct: 127  LFSNTLVALPTGLGKTLIAAVVMYNYFRWFPQGKIVFAAPSRPLVMQQIEACHNIVGIPQ 186

Query: 529  EWAIDLTGQTSPSKRAYLWKAKRVFFVTPQVLEKDIQSGTCLVKHLVCLVIDEAHRASGN 350
            EW IDLTGQT PSKRA+LWK+KRVFFVTPQVLEKDIQSGTCL  +LVCLVIDEAHRA GN
Sbjct: 187  EWTIDLTGQTCPSKRAFLWKSKRVFFVTPQVLEKDIQSGTCLTNYLVCLVIDEAHRALGN 246

Query: 349  YSYCVAVRELMAVPLQFRILALTATPGSKQQAIQKVIDNLQISKLEYRTETDDDVSPYVH 170
            YSYCV VRELMAVP+Q RILALTATPGSK QAIQ +IDNLQIS LEYR E+D DV PYVH
Sbjct: 247  YSYCVVVRELMAVPIQLRILALTATPGSKTQAIQGIIDNLQISTLEYRNESDHDVCPYVH 306

Query: 169  NRKLELVKVPMGKDAVETNDMILEAIRPFVTKLTSFGVHLNRDSQTLSPCDLLNTR 2
            +RKLE+++VP+G+DA + +  +   IRP+  +L +FGV+LNRD QTLSP ++L  R
Sbjct: 307  DRKLEVIEVPLGQDADDVSKRLFHVIRPYAVRLKNFGVNLNRDIQTLSPHEVLMAR 362


>ref|NP_001185141.1| fanconi anemia group M protein [Arabidopsis thaliana]
            gi|332193686|gb|AEE31807.1| fanconi anemia group M
            protein [Arabidopsis thaliana]
          Length = 1390

 Score =  454 bits (1169), Expect = e-125
 Identities = 233/356 (65%), Positives = 265/356 (74%), Gaps = 10/356 (2%)
 Frame = -2

Query: 1039 VSIMNDDDEFDWEAAVKAIDVAC--------QERXXXXXXXXXXXXXXXXXXXXSRQSTL 884
            +  + +D EFDWEAAVK ID+AC                                RQSTL
Sbjct: 7    IETIEEDGEFDWEAAVKEIDLACLKTTNASSSSSSHFTPLANPPITANLTKPPAKRQSTL 66

Query: 883  DSFIQRKNQSTTHSQVVGN--EESNNLGCYCAIDLEAAKTWIYPVNIPLRDYQLSITKTA 710
            D FI R      + QVV       N+      ID EAAKTWIYP  +PLRDYQ +ITKTA
Sbjct: 67   DKFIGRTEHKPENHQVVSECGVNDNDNSPLVGIDPEAAKTWIYPGFVPLRDYQFAITKTA 126

Query: 709  LFANTLVALPTGLGKTLIAAVVMYNYFRWFPEGKIVFAAPSRPLVLQQIEACHNTVGIPQ 530
            LF+NTLVALPTGLGKTLIAAVVMYNYFRWFP+GKIVFAAPSRPLV+QQIEACHN VGIPQ
Sbjct: 127  LFSNTLVALPTGLGKTLIAAVVMYNYFRWFPQGKIVFAAPSRPLVMQQIEACHNIVGIPQ 186

Query: 529  EWAIDLTGQTSPSKRAYLWKAKRVFFVTPQVLEKDIQSGTCLVKHLVCLVIDEAHRASGN 350
            EW IDLTGQT PSKRA+LWK+KRVFFVTPQVLEKDIQSGTCL  +LVCLVIDEAHRA GN
Sbjct: 187  EWTIDLTGQTCPSKRAFLWKSKRVFFVTPQVLEKDIQSGTCLTNYLVCLVIDEAHRALGN 246

Query: 349  YSYCVAVRELMAVPLQFRILALTATPGSKQQAIQKVIDNLQISKLEYRTETDDDVSPYVH 170
            YSYCV VRELMAVP+Q RILALTATPGSK QAIQ +IDNLQIS LEYR E+D DV PYVH
Sbjct: 247  YSYCVVVRELMAVPIQLRILALTATPGSKTQAIQGIIDNLQISTLEYRNESDHDVCPYVH 306

Query: 169  NRKLELVKVPMGKDAVETNDMILEAIRPFVTKLTSFGVHLNRDSQTLSPCDLLNTR 2
            +RKLE+++VP+G+DA + +  +   IRP+  +L +FGV+LNRD QTLSP ++L  R
Sbjct: 307  DRKLEVIEVPLGQDADDVSKRLFHVIRPYAVRLKNFGVNLNRDIQTLSPHEVLMAR 362


>ref|XP_002891189.1| hypothetical protein ARALYDRAFT_473682 [Arabidopsis lyrata subsp.
            lyrata] gi|297337031|gb|EFH67448.1| hypothetical protein
            ARALYDRAFT_473682 [Arabidopsis lyrata subsp. lyrata]
          Length = 1321

 Score =  452 bits (1164), Expect = e-125
 Identities = 236/367 (64%), Positives = 269/367 (73%), Gaps = 21/367 (5%)
 Frame = -2

Query: 1039 VSIMNDDDEFDWEAAVKAIDVAC----------QERXXXXXXXXXXXXXXXXXXXXSRQS 890
            +  + +D+EFDWEAAVK ID+AC                                  RQS
Sbjct: 7    IETIEEDEEFDWEAAVKEIDLACLKTSNASSSSSSSSHFTPLAHPPITGNSTKPPAKRQS 66

Query: 889  TLDSFIQRKNQSTTHSQVVGNEESNNLGC---------YCAIDLEAAKTWIYPVN--IPL 743
            TLD FI R  +    +QVV     +   C            ID EAAKTWIYPVN  +PL
Sbjct: 67   TLDKFIGR-TEHRPENQVVSQSNFDEFECGGNDDDKSPLVGIDPEAAKTWIYPVNGSVPL 125

Query: 742  RDYQLSITKTALFANTLVALPTGLGKTLIAAVVMYNYFRWFPEGKIVFAAPSRPLVLQQI 563
            RDYQ +ITKTALF+NTLVALPTGLGKTLIAAVVMYNYFRWFPEGKIVFAAPSRPLV+QQI
Sbjct: 126  RDYQFAITKTALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPEGKIVFAAPSRPLVMQQI 185

Query: 562  EACHNTVGIPQEWAIDLTGQTSPSKRAYLWKAKRVFFVTPQVLEKDIQSGTCLVKHLVCL 383
            EACHN VGIPQEW IDLTGQT PSKRA+LWK+KRVFFVTPQVLEKDIQSGTCL  +LVCL
Sbjct: 186  EACHNIVGIPQEWTIDLTGQTCPSKRAFLWKSKRVFFVTPQVLEKDIQSGTCLTNYLVCL 245

Query: 382  VIDEAHRASGNYSYCVAVRELMAVPLQFRILALTATPGSKQQAIQKVIDNLQISKLEYRT 203
            VIDEAHRA GNYSYCV VRELMAVP+Q RILALTATPGSK  AIQ +IDNLQIS LEYR 
Sbjct: 246  VIDEAHRALGNYSYCVVVRELMAVPVQLRILALTATPGSKTLAIQGIIDNLQISTLEYRN 305

Query: 202  ETDDDVSPYVHNRKLELVKVPMGKDAVETNDMILEAIRPFVTKLTSFGVHLNRDSQTLSP 23
            E+D DV PYVH+RKLEL++VP+G+DA + +  + + IRP+  +L +FGV+LNRD QTLSP
Sbjct: 306  ESDHDVCPYVHDRKLELIEVPLGQDADDVSKRLFDVIRPYAVRLKNFGVNLNRDLQTLSP 365

Query: 22   CDLLNTR 2
             ++L  R
Sbjct: 366  HEVLMAR 372