BLASTX nr result

ID: Coptis21_contig00017196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017196
         (1492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272822.2| PREDICTED: shugoshin-1-like [Vitis vinifera]...   162   3e-37
ref|XP_002315332.1| predicted protein [Populus trichocarpa] gi|2...   143   1e-31
ref|XP_003632272.1| PREDICTED: shugoshin-1-like [Vitis vinifera]      134   8e-29
ref|XP_002523714.1| Shugoshin-1, putative [Ricinus communis] gi|...   127   1e-26
ref|XP_003540772.1| PREDICTED: uncharacterized protein LOC100801...   119   2e-24

>ref|XP_002272822.2| PREDICTED: shugoshin-1-like [Vitis vinifera]
            gi|296085974|emb|CBI31415.3| unnamed protein product
            [Vitis vinifera]
          Length = 317

 Score =  162 bits (409), Expect = 3e-37
 Identities = 136/387 (35%), Positives = 183/387 (47%), Gaps = 12/387 (3%)
 Frame = +2

Query: 116  MEGFRVLDQEKCGFGGGKLIGEKLSPG--GGVVRKGLSDITNNSQHYIKSPNNNKSMP-- 283
            MEG  VLD    G    K   EK+  G  G   RK L+DI+N  +   K P      P  
Sbjct: 1    MEGLLVLDP---GVEDNKAKREKMVKGSFGNTPRKRLADISNFQEKKSK-PTTQVEKPLT 56

Query: 284  ----TKDNV-HLVKEILALRQLVQERNKLLELAGTEISKLRTNVLKFXXXXXXXXXXXXX 448
                TK+ + HL +E +AL +L+ +RNK++E+ G E+ KLR  + K              
Sbjct: 57   IPPTTKEYIEHLHQENMALAKLLADRNKIIEVTGIELQKLRICLQKLQQQNLQLAQANSQ 116

Query: 449  ITVERTRDKDRIKVLQHELGCKGALLIIKDVELQEKVKKEPCQMPQTAKMTKRKCEEIKG 628
            +  E    KDR++VL HELGCK  +L +++ EL+EK KK+      T K T         
Sbjct: 117  MLAELNSGKDRLRVLHHELGCKNGILQVRNSELEEKAKKK------TYKKT--------- 161

Query: 629  EVGGDKKPCTXXXXXXXXXXXXXVGEQVDAKEEAGNKCEELKGEAVQADASDKKACNAIR 808
                                    G QV        KCEE  GE++Q D SD K C   +
Sbjct: 162  ------------------------GNQVGTI-----KCEEA-GESLQEDKSDDKPCTT-K 190

Query: 809  KRQSRTQCIAEQAVAREEAVLNSEAVKGEAVQADGCDRPCKLNRKRQSSILRRQSARFKS 988
            +RQS+ Q I   + +++      E  K E             N+K QS   RRQS RF S
Sbjct: 191  RRQSKNQSIVSPSSSKQV----QEKDKAE-------------NKKLQS---RRQSTRFIS 230

Query: 989  AEVEPTDDLFEIEDARFPTSTLLDEKVQDGATPSTAEEEKEQKHHWNYD--TPVL-RTSI 1159
             + EPT+DLFEI+DA+FP S L D+ + D    S     K+       +  TP   R+SI
Sbjct: 231  VKSEPTEDLFEIDDAKFPASQLHDDPMHDNCPTSLGSSGKKANGDGALEVATPEFRRSSI 290

Query: 1160 GRPMRRAAGKVHSYKEASVNKKMRRED 1240
            GRP+RRAA KV SYKE  +N KMRR +
Sbjct: 291  GRPLRRAAEKVQSYKEIPINVKMRRSE 317


>ref|XP_002315332.1| predicted protein [Populus trichocarpa] gi|222864372|gb|EEF01503.1|
            predicted protein [Populus trichocarpa]
          Length = 442

 Score =  143 bits (360), Expect = 1e-31
 Identities = 125/432 (28%), Positives = 187/432 (43%), Gaps = 57/432 (13%)
 Frame = +2

Query: 116  MEGFRVLDQEKCGFGGGKLIGEKLSPGGGV----------------VRKGLSDITNNSQH 247
            MEG  VLD E     G K+ GEKL  G  V                 RK L+DI+N SQ 
Sbjct: 1    MEGVPVLDTENINVAGDKIKGEKLEKGSLVGIAQRKTLVDINNFPAQRKMLADISNLSQR 60

Query: 248  --YIKSPNNNKSMPTKDNVH-LVKEILALRQLVQERNKLLELAGTEISKLRTNVLKFXXX 418
              Y KS +    + +K++V  L ++I+AL +LV +RNK++EL+  E+ KLR N  +    
Sbjct: 61   NQYGKSQS---VLVSKEHVEKLQRDIMALTKLVADRNKIIELSAIELQKLRVNYQQLQQQ 117

Query: 419  XXXXXXXXXXITVERTRDKDRIKVLQHELGCKGALLIIKDVELQEKVKKEPCQMPQTAKM 598
                      +  E    KD++K  QHELGCK  LL  K +EL+EK KK   Q       
Sbjct: 118  NLQLAQTNSQMLAELNAGKDKLKAYQHELGCKNGLLNAKKLELKEKTKKVRSQN------ 171

Query: 599  TKRKCEEIKGEVGG------DKKPCTXXXXXXXXXXXXXVGEQVDAKEEAGNKCEELKGE 760
             + + E IKG+         D KPC                   + K +  +K + L   
Sbjct: 172  MRNEVETIKGDNAAQFSQPEDNKPC-------------------NTKRKRQSKVQSLDSS 212

Query: 761  AVQ-ADASDKKACNAIRKRQSRTQCIAEQAVAREEAVLNSEAVKGEAVQADGCDRPCKLN 937
            AV+     D     ++  R+      + +    +  V  S  ++ ++ +    + P + +
Sbjct: 213  AVKPGQTEDNVEKKSVCLRRQSAMFKSGEEPTEKNIVTKSVCLRRQSARLKSGEEPNEKD 272

Query: 938  RKRQSSILRRQSARFKSAEV---------------------------EPTDDLFEIEDAR 1036
               +S  LRRQSARFKS E                            EP ++LF+ +DA+
Sbjct: 273  IDTKSVCLRRQSARFKSGEEPTEKDTDTKRICTGRQSTRVKSEDQIQEPAENLFQTDDAK 332

Query: 1037 FPTSTLLDEKVQDGATPSTAEEEKEQKHHWN----YDTPVLRTSIGRPMRRAAGKVHSYK 1204
            F    L D+ V +    S+    K +    N    ++T  L+ +  RP RRA  KV +YK
Sbjct: 333  FHIPPLHDDPVHESCPTSSVPSVKIESETGNSVPRFETQELQRTSFRPTRRAVEKVQTYK 392

Query: 1205 EASVNKKMRRED 1240
            E  +N KMRR +
Sbjct: 393  EIPLNVKMRRSE 404


>ref|XP_003632272.1| PREDICTED: shugoshin-1-like [Vitis vinifera]
          Length = 297

 Score =  134 bits (336), Expect = 8e-29
 Identities = 119/372 (31%), Positives = 166/372 (44%), Gaps = 15/372 (4%)
 Frame = +2

Query: 164  GKLIGEKLSPGGGVVRKGLSDITNNS-------QHYIKSPNNNKSMPTKDNV-HLVKEIL 319
            G+ + ++ S  G ++RK LSDITN+        Q   +SP NN S   +D +  L+KE  
Sbjct: 3    GEKMAKRSSTFGSIMRKRLSDITNSQSQLKVSGQEEKRSPPNNLS--AEDYIDQLLKENA 60

Query: 320  ALRQLVQERNKLLELAGTEISKLRTNVLKFXXXXXXXXXXXXXITVERTRDKDRIKVLQH 499
            AL +L+ ER K++EL+G E+ KLRTN  K              +  E    ++++K +QH
Sbjct: 61   ALMKLLAERQKIIELSGVELQKLRTNYQKLQLQNWNLAQSNSQMLAELNLGREKMKAVQH 120

Query: 500  ELGCKGALLIIKDVELQEKVKKEPCQMPQTAKMTKRKCEEIKGEVGGDKKPCTXXXXXXX 679
            EL CK ALL   ++EL+ K K   CQ        K   +E+                   
Sbjct: 121  ELICKEALLKANNLELEGKAKMN-CQ--------KTGIQEV------------------- 152

Query: 680  XXXXXXVGEQVDAKEEAGNKCEELKGEAVQADASDKKACNAIRKRQSRTQCIAEQAVARE 859
                                 E+  GE +       + C A R+R +R+Q +      ++
Sbjct: 153  ---------------------EDKAGEPLPKAHDANRLCKANRRRPARSQSMGSSTAYQQ 191

Query: 860  EAVLNSEAVKGEAVQADGCDRPCKLNRKRQSSILRRQSARFKSAEVEPTDDLFEIEDARF 1039
              V   E V+                 KR  S  RRQS RFKS + EP  DLFEIEDA+ 
Sbjct: 192  --VEEKETVE----------------TKRHCS--RRQSCRFKSQQREPNGDLFEIEDAKL 231

Query: 1040 PTSTLLDEKVQDGATPSTAEEEKEQ-------KHHWNYDTPVLRTSIGRPMRRAAGKVHS 1198
            P         + G  PS +  +KE+       KH         R+SIGRP+RRAA KV S
Sbjct: 232  PVGWH-----EGGLAPSNSPIKKEEGDESCVEKHEARGSQ---RSSIGRPLRRAAEKVQS 283

Query: 1199 YKEASVNKKMRR 1234
            YKEA +N KMRR
Sbjct: 284  YKEAPLNTKMRR 295


>ref|XP_002523714.1| Shugoshin-1, putative [Ricinus communis] gi|223537018|gb|EEF38654.1|
            Shugoshin-1, putative [Ricinus communis]
          Length = 302

 Score =  127 bits (318), Expect = 1e-26
 Identities = 114/363 (31%), Positives = 165/363 (45%), Gaps = 10/363 (2%)
 Frame = +2

Query: 182  KLSPGGGVVRKGLSDITNNSQHYIKSPN-NNKSMPTKDNVH-----LVKEILALRQLVQE 343
            K S  G +VRK LSDITN SQ   K  N   K  P  D        L+KE + L +LV+E
Sbjct: 8    KRSSFGSIVRKRLSDITN-SQSQTKLVNIEEKQPPISDPTEGLINQLLKEKVTLMKLVEE 66

Query: 344  RNKLLELAGTEISKLRTNVLKFXXXXXXXXXXXXXITVERTRDKDRIKVLQHELGCKGAL 523
            ++K++ L+  ++  LR +  K              +  E    ++++K LQHEL CK AL
Sbjct: 67   KDKIIALSNNQMRSLRLHYQKLQMQNWNLAQSNSQMLAEINLGREKLKSLQHELICKDAL 126

Query: 524  LIIKDVELQEKVKKEPCQMPQTAKMTKRKCEEIKGEVGGDKKPCTXXXXXXXXXXXXXVG 703
            L  K++EL+ K                    +I  +  G +                   
Sbjct: 127  LKAKNLELEGKT-------------------DITSQNNGSQ------------------- 148

Query: 704  EQVDAKEEAGNKCEELKGEAVQADASDKKACNAIRKRQSRTQCIAEQAVAREEAVLNSEA 883
               +A++ A  +C        +A    K   + IR+R +R+Q +     +  +     +A
Sbjct: 149  ---EAEKNAVGEC------LYKASNGSKPGNHRIRRRVARSQSMGPSTTSSRQ-----DA 194

Query: 884  VKGEAVQADGCDRPCKLNRKRQSSILRRQSARFKSAEVEPTDDLFEIEDARFPTSTLLDE 1063
             K             KL  KR+   LRRQSARFKS E EP+++LFEIED     +  LD 
Sbjct: 195  EKE------------KLENKRRC--LRRQSARFKSQEREPSENLFEIEDVTLSITQQLDN 240

Query: 1064 KVQDGA----TPSTAEEEKEQKHHWNYDTPVLRTSIGRPMRRAAGKVHSYKEASVNKKMR 1231
             VQ+ A      S  +EE+          P  R+S+GRP+RRAA KV SYKEA +N K+R
Sbjct: 241  PVQEDAQTLPESSVIKEEETCDSRTEAQVP-QRSSLGRPVRRAAEKVQSYKEAPINVKLR 299

Query: 1232 RED 1240
            R+D
Sbjct: 300  RKD 302


>ref|XP_003540772.1| PREDICTED: uncharacterized protein LOC100801538 [Glycine max]
          Length = 283

 Score =  119 bits (298), Expect = 2e-24
 Identities = 101/350 (28%), Positives = 156/350 (44%), Gaps = 2/350 (0%)
 Frame = +2

Query: 197  GGVVRKGLSDITNNSQHYIKSPNNNKSMPTKDNV--HLVKEILALRQLVQERNKLLELAG 370
            G ++RK LSDITNN+   +     + ++P+ +N    L+KE  AL QL+ ERNK++E +G
Sbjct: 14   GSLMRKKLSDITNNTNPPLSQQQLDTTLPSDNNFIQQLLKERTALIQLLAERNKIIEASG 73

Query: 371  TEISKLRTNVLKFXXXXXXXXXXXXXITVERTRDKDRIKVLQHELGCKGALLIIKDVELQ 550
             E+ +LR +V K              +  E    ++RIK LQHE+  + AL+  K+V++Q
Sbjct: 74   VELRRLRADVTKLQIQNWNLAQSNSHMLAELNMGRERIKTLQHEILWRAALIKGKNVDVQ 133

Query: 551  EKVKKEPCQMPQTAKMTKRKCEEIKGEVGGDKKPCTXXXXXXXXXXXXXVGEQVDAKEEA 730
            EKV                       E+  +K P               + +  +  E+A
Sbjct: 134  EKV-----------------------EIDCEKNP--------------TLSQLQEEDEKA 156

Query: 731  GNKCEELKGEAVQADASDKKACNAIRKRQSRTQCIAEQAVAREEAVLNSEAVKGEAVQAD 910
            G    +         AS+ +  N + +R+ R++     + ++     + + VK       
Sbjct: 157  GQPSPK---------ASNDEKHNCMNRRRIRSKSTGSSSASKN---TSKDKVKD------ 198

Query: 911  GCDRPCKLNRKRQSSILRRQSARFKSAEVEPTDDLFEIEDARFPTSTLLDEKVQDGATPS 1090
                    N +R    LRR S  FK+ E EP ++LFE+EDA +  +     K   G +  
Sbjct: 199  --------NGRR----LRRHSTTFKTHEHEPLENLFELEDATYLVTQSPISKTGRGKSSD 246

Query: 1091 TAEEEKEQKHHWNYDTPVLRTSIGRPMRRAAGKVHSYKEASVNKKMRRED 1240
            +  E               R S GRP+RRA  KVHSYKE  VN KMRR D
Sbjct: 247  SRNEAP-------------RCSFGRPLRRAVQKVHSYKEIPVNVKMRRLD 283


Top