BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017192
         (727 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267026.2| PREDICTED: pentatricopeptide repeat-containi...   290   2e-76
emb|CBI35665.3| unnamed protein product [Vitis vinifera]              290   2e-76
ref|XP_002512657.1| pentatricopeptide repeat-containing protein,...   283   3e-74
ref|XP_002299341.1| predicted protein [Populus trichocarpa] gi|2...   282   6e-74
ref|NP_849717.1| uncharacterized protein [Arabidopsis thaliana] ...   280   3e-73

>ref|XP_002267026.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
            chloroplastic-like [Vitis vinifera]
          Length = 835

 Score =  290 bits (743), Expect = 2e-76
 Identities = 140/206 (67%), Positives = 163/206 (79%)
 Frame = -3

Query: 659  ALYQLHLVKATTARAFIPKDFRLVEAFGYTLGGFFLAHYDDSPVGIFDELVVIAGIVWNP 480
            ALYQLHLVKA TARAFIPK+FRLVEAFGYTLGGFFLA Y+DSP G+FDELVVIAGIVWNP
Sbjct: 554  ALYQLHLVKAETARAFIPKEFRLVEAFGYTLGGFFLASYEDSPAGVFDELVVIAGIVWNP 613

Query: 479  PTSCAWAARVLVNNREACLHGRKEVGLPSHVAGFSKKTTSISKKPRDKRNDFLNLLGVGS 300
            PTSCAWAARVLVN+ EAC+HGRK VGLPS VA FSK+ T+I ++ R K N FLN++G+G+
Sbjct: 614  PTSCAWAARVLVNSDEACVHGRKAVGLPSQVARFSKRITAIPRQQRSKTNGFLNMIGIGN 673

Query: 299  AFSNTKHHTDIHVTDINGSAEVEFCSIKLPVSEPQESSASNWMGPVVKMSLPSYSGNTEY 120
             F++ K   D+ VT+I G    + CS+ L  + P       WMGP +KMSLPS+SG+T Y
Sbjct: 674  TFNSPKDCMDVQVTEIEGHTAADACSVNLNTAVPL-LKPEKWMGPAIKMSLPSFSGHTVY 732

Query: 119  NPQLLKYSCQIECRVRPVKTAEVSGP 42
            NP LLKYSCQIECRVR VK A VS P
Sbjct: 733  NPNLLKYSCQIECRVRAVKPARVSSP 758


>emb|CBI35665.3| unnamed protein product [Vitis vinifera]
          Length = 323

 Score =  290 bits (743), Expect = 2e-76
 Identities = 140/206 (67%), Positives = 163/206 (79%)
 Frame = -3

Query: 659 ALYQLHLVKATTARAFIPKDFRLVEAFGYTLGGFFLAHYDDSPVGIFDELVVIAGIVWNP 480
           ALYQLHLVKA TARAFIPK+FRLVEAFGYTLGGFFLA Y+DSP G+FDELVVIAGIVWNP
Sbjct: 42  ALYQLHLVKAETARAFIPKEFRLVEAFGYTLGGFFLASYEDSPAGVFDELVVIAGIVWNP 101

Query: 479 PTSCAWAARVLVNNREACLHGRKEVGLPSHVAGFSKKTTSISKKPRDKRNDFLNLLGVGS 300
           PTSCAWAARVLVN+ EAC+HGRK VGLPS VA FSK+ T+I ++ R K N FLN++G+G+
Sbjct: 102 PTSCAWAARVLVNSDEACVHGRKAVGLPSQVARFSKRITAIPRQQRSKTNGFLNMIGIGN 161

Query: 299 AFSNTKHHTDIHVTDINGSAEVEFCSIKLPVSEPQESSASNWMGPVVKMSLPSYSGNTEY 120
            F++ K   D+ VT+I G    + CS+ L  + P       WMGP +KMSLPS+SG+T Y
Sbjct: 162 TFNSPKDCMDVQVTEIEGHTAADACSVNLNTAVPL-LKPEKWMGPAIKMSLPSFSGHTVY 220

Query: 119 NPQLLKYSCQIECRVRPVKTAEVSGP 42
           NP LLKYSCQIECRVR VK A VS P
Sbjct: 221 NPNLLKYSCQIECRVRAVKPARVSSP 246


>ref|XP_002512657.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223548618|gb|EEF50109.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 837

 Score =  283 bits (723), Expect = 3e-74
 Identities = 139/217 (64%), Positives = 165/217 (76%)
 Frame = -3

Query: 659  ALYQLHLVKATTARAFIPKDFRLVEAFGYTLGGFFLAHYDDSPVGIFDELVVIAGIVWNP 480
            ALYQLHLVKA TARAFIPK+FRLVEAFGYTLGGFFLA+Y+DSP G FDELVVIAGIVWNP
Sbjct: 559  ALYQLHLVKAETARAFIPKEFRLVEAFGYTLGGFFLANYEDSPAGAFDELVVIAGIVWNP 618

Query: 479  PTSCAWAARVLVNNREACLHGRKEVGLPSHVAGFSKKTTSISKKPRDKRNDFLNLLGVGS 300
            PTSCAWAARVLV++ +AC HGRKEVGLPSHVA FSK+  +I+++   K N FL+  G+G+
Sbjct: 619  PTSCAWAARVLVSSDDACDHGRKEVGLPSHVARFSKRNATIARQRTSKYNHFLDPFGLGT 678

Query: 299  AFSNTKHHTDIHVTDINGSAEVEFCSIKLPVSEPQESSASNWMGPVVKMSLPSYSGNTEY 120
            A S      D+ VT+ING++    C+I L  + P       WMGP +KMSLPS+SG TE+
Sbjct: 679  ALSRPDDRMDVQVTEINGASTTNICNINLATAVP----GIKWMGPAIKMSLPSFSGRTEH 734

Query: 119  NPQLLKYSCQIECRVRPVKTAEVSGPIHTDKIDGEKS 9
            NP LLKYSC IECRVR V+ AE+S P    K   E+S
Sbjct: 735  NPNLLKYSCNIECRVRAVRPAEISVPFPASKHRTEES 771


>ref|XP_002299341.1| predicted protein [Populus trichocarpa] gi|222846599|gb|EEE84146.1|
           predicted protein [Populus trichocarpa]
          Length = 306

 Score =  282 bits (721), Expect = 6e-74
 Identities = 141/224 (62%), Positives = 171/224 (76%), Gaps = 3/224 (1%)
 Frame = -3

Query: 665 FSALYQLHLVKATTARAFIPKDFRLVEAFGYTLGGFFLAHYDDSPVGIFDELVVIAGIVW 486
           + ALYQLHLVK+  ARA IPK+FRLVEAFGYTLGGFFLA Y+DSP G+FDELVVIAGIVW
Sbjct: 26  YKALYQLHLVKSKIARASIPKEFRLVEAFGYTLGGFFLASYEDSPAGVFDELVVIAGIVW 85

Query: 485 NPPTSCAWAARVLVNNREACLHGRKEVGLPSHVAGFSK---KTTSISKKPRDKRNDFLNL 315
           NPPTSCAWAARVLVN+ +AC HGRK+VGLPS VA FSK   K T+I ++ + K N FL++
Sbjct: 86  NPPTSCAWAARVLVNSGDACDHGRKDVGLPSQVAKFSKVIFKITAIPRRRKSKFNGFLDM 145

Query: 314 LGVGSAFSNTKHHTDIHVTDINGSAEVEFCSIKLPVSEPQESSASNWMGPVVKMSLPSYS 135
           +G+G+A S+TK   D+ VT+ NG +  + C+IKL  S P       W GP +KMSLPS+S
Sbjct: 146 IGLGTASSSTKDCMDVLVTETNGPSATDICNIKLTTSVP-GVKFDKWKGPAIKMSLPSFS 204

Query: 134 GNTEYNPQLLKYSCQIECRVRPVKTAEVSGPIHTDKIDGEKSSN 3
           G TEYNP LLKY+C IECRVR V+ A+VSGP    K D E+S +
Sbjct: 205 GRTEYNPNLLKYTCSIECRVRAVQAAKVSGPSSPPKHDTEESQS 248


>ref|NP_849717.1| uncharacterized protein [Arabidopsis thaliana]
           gi|42562369|ref|NP_174131.3| uncharacterized protein
           [Arabidopsis thaliana] gi|145362298|ref|NP_973925.2|
           uncharacterized protein [Arabidopsis thaliana]
           gi|26452923|dbj|BAC43539.1| unknown protein [Arabidopsis
           thaliana] gi|28973285|gb|AAO63967.1| unknown protein
           [Arabidopsis thaliana] gi|222424621|dbj|BAH20265.1|
           AT1G28100 [Arabidopsis thaliana]
           gi|332192792|gb|AEE30913.1| uncharacterized protein
           [Arabidopsis thaliana] gi|332192793|gb|AEE30914.1|
           uncharacterized protein [Arabidopsis thaliana]
           gi|332192794|gb|AEE30915.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 282

 Score =  280 bits (715), Expect = 3e-73
 Identities = 132/211 (62%), Positives = 165/211 (78%)
 Frame = -3

Query: 662 SALYQLHLVKATTARAFIPKDFRLVEAFGYTLGGFFLAHYDDSPVGIFDELVVIAGIVWN 483
           SALYQ+HLVKA TARAFIPK+FRLVEAFGYTLGGFFLA YDDSP G+FDELVVIAGIVWN
Sbjct: 22  SALYQIHLVKAATARAFIPKEFRLVEAFGYTLGGFFLASYDDSPAGVFDELVVIAGIVWN 81

Query: 482 PPTSCAWAARVLVNNREACLHGRKEVGLPSHVAGFSKKTTSISKKPRDKRNDFLNLLGVG 303
           PPTSCAWAARVLVN+ EAC HGRKEVGLPS VA FSK  T++ K+ RD+   FL+  G+G
Sbjct: 82  PPTSCAWAARVLVNSDEACHHGRKEVGLPSQVARFSKNITAVPKQKRDRAFGFLDTFGLG 141

Query: 302 SAFSNTKHHTDIHVTDINGSAEVEFCSIKLPVSEPQESSASNWMGPVVKMSLPSYSGNTE 123
           +  S+ ++  ++ V++++ +A  + C+I++      E+   NWMGP +KM+LPS+SGNT 
Sbjct: 142 TTLSHPENLMEVKVSEVDSAASTDICNIQI---RSDETKVGNWMGPAIKMALPSFSGNTI 198

Query: 122 YNPQLLKYSCQIECRVRPVKTAEVSGPIHTD 30
           YN  LLKYSC + CRVRPV+ A VSG +  +
Sbjct: 199 YNSNLLKYSCHLHCRVRPVRPAVVSGALEDE 229