BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017190
         (1476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531533.1| PREDICTED: pentatricopeptide repeat-containi...   469   e-130
ref|XP_002522615.1| pentatricopeptide repeat-containing protein,...   468   e-129
ref|XP_003545705.1| PREDICTED: pentatricopeptide repeat-containi...   463   e-128
ref|XP_002323959.1| predicted protein [Populus trichocarpa] gi|2...   458   e-126
ref|XP_002268952.2| PREDICTED: pentatricopeptide repeat-containi...   452   e-125

>ref|XP_003531533.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
            mitochondrial-like [Glycine max]
          Length = 395

 Score =  469 bits (1208), Expect = e-130
 Identities = 232/381 (60%), Positives = 297/381 (77%)
 Frame = +3

Query: 81   RMNSYPALKLNQTRFLSNPFSSIPLESDDDLEESKQDDLKTKIFRLRFSKRSVTTLLEKW 260
            R NS  A  LN+TRF+S+   ++  +  ++  E   DDL+++IFRLR  KRS T +L+KW
Sbjct: 11   RRNSGLACLLNRTRFVSS--GAVSSDLVEESVEGVDDDLRSRIFRLRLPKRSATNVLQKW 68

Query: 261  VADGNNVTLFELRNIARDLNKSQRYKHALEISEWMVRNQEFELSDSDYGVRIDLMTKVFG 440
            V  GN VTL +LR+I+++L +SQRYKHALEISEWMV ++E+ELSDSDY  RIDL TKVFG
Sbjct: 69   VLQGNPVTLSQLRDISKELRRSQRYKHALEISEWMVSHEEYELSDSDYAARIDLTTKVFG 128

Query: 441  IDAAERYFEGLPLEVKTGETYTSLLHSYAGAKMTERAENFFQRVKEENVSLNAMMYNEMM 620
            IDAAERYFEGLPL  KT ETYT+LLHSYAGAK+T++AE  +QR+K+ N+S +A+ YNEMM
Sbjct: 129  IDAAERYFEGLPLATKTAETYTALLHSYAGAKLTKKAEELYQRIKDSNLSFDALTYNEMM 188

Query: 621  TLYMSVGQLEKVPSVIEDMKRRKVSLDLFTYNLWISACAANLDLDSVKSILDEMSCDPNS 800
            TLYMSVGQ EKVPSV+E++K++KVS D+FTYNLWIS CAA L++D V+ ILDEMS    S
Sbjct: 189  TLYMSVGQFEKVPSVVEELKQQKVSPDIFTYNLWISYCAAILNIDEVRRILDEMSHGAGS 248

Query: 801  DGGWEIYRQLTSIYINAGNLVNSDGTSVVETERKITQRESITYDFLIILYTGLKNKEKIN 980
            +  W  Y  L +IYI+ G+L N+   ++VETE++ITQR+ ITYDFLIILY GL +K+K++
Sbjct: 249  NESWIRYLNLANIYISVGHLDNASSNTLVETEKRITQRQWITYDFLIILYGGLGSKDKLD 308

Query: 981  QIWKSLRMAPMKMTSRNYICVISSYLMLGHFKEVDEVFEQWKQSTTTDFDSYACSRLLSA 1160
            QIW SLRM   KM SRNYIC+ISSYLMLGH KEV EV +QWKQSTTTDFD  AC +++ A
Sbjct: 309  QIWNSLRMTKQKMISRNYICIISSYLMLGHTKEVGEVIDQWKQSTTTDFDMLACKKIMVA 368

Query: 1161 VAGAGLVDKADGLRALMIQKN 1223
                GL + A+ L  ++I+KN
Sbjct: 369  FRDMGLAEIANNLNMILIEKN 389


>ref|XP_002522615.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223538091|gb|EEF39702.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 426

 Score =  468 bits (1203), Expect = e-129
 Identities = 236/413 (57%), Positives = 303/413 (73%), Gaps = 5/413 (1%)
 Frame = +3

Query: 9    LEADFVAAMTMRSLSSLLKRTLIERMNSYPALKLNQTRFLSNPF-SSIPLESDDDLEESK 185
            L+ + V    M S S L     I R+NS      N  ++  N F SS  L ++   EES 
Sbjct: 9    LKTNEVKRAVMASRSFLFNLQRICRINSGIGSLSNSKKWEFNHFLSSGTLRNEVLAEESS 68

Query: 186  ----QDDLKTKIFRLRFSKRSVTTLLEKWVADGNNVTLFELRNIARDLNKSQRYKHALEI 353
                +DDLK++IFRLR  KRS T ++  WV++GN VT  ELRNI+ +L K QRYKHALEI
Sbjct: 69   SKEIEDDLKSRIFRLRLPKRSATNIIHNWVSEGNTVTASELRNISNELRKLQRYKHALEI 128

Query: 354  SEWMVRNQEFELSDSDYGVRIDLMTKVFGIDAAERYFEGLPLEVKTGETYTSLLHSYAGA 533
            SEWMV N+EFEL D DY  RIDLMTKVFGIDAAERYFEGLP+ VKT ETYT+LLHSYAG 
Sbjct: 129  SEWMVTNKEFELMDFDYATRIDLMTKVFGIDAAERYFEGLPITVKTSETYTALLHSYAGV 188

Query: 534  KMTERAENFFQRVKEENVSLNAMMYNEMMTLYMSVGQLEKVPSVIEDMKRRKVSLDLFTY 713
            K   +AE  ++R+K  N+S  A+ YNEMMTLYMSVGQ+EKV  V+E++KR+K++ D+FTY
Sbjct: 189  KQLGKAEELYERIKGSNLSFTALTYNEMMTLYMSVGQVEKVSLVVEELKRQKIAPDIFTY 248

Query: 714  NLWISACAANLDLDSVKSILDEMSCDPNSDGGWEIYRQLTSIYINAGNLVNSDGTSVVET 893
            NLWIS+CAA L++D V  ILDEM  D   +  W  Y  + +IY+ AG+LVN++ ++VVE 
Sbjct: 249  NLWISSCAAILNIDQVTRILDEMKHDSGCNDDWLRYIDIANIYVKAGHLVNTESSAVVEA 308

Query: 894  ERKITQRESITYDFLIILYTGLKNKEKINQIWKSLRMAPMKMTSRNYICVISSYLMLGHF 1073
            E+ ITQRE ITYDFLIILY GL++K+K++QIWKSLRM   KMT+RN++C++SSY+MLGH 
Sbjct: 309  EKSITQREWITYDFLIILYAGLRDKDKVDQIWKSLRMTKQKMTNRNFVCILSSYMMLGHL 368

Query: 1074 KEVDEVFEQWKQSTTTDFDSYACSRLLSAVAGAGLVDKADGLRALMIQKNCNP 1232
            KE  EV +QWK+STTTDFD  ACSRLL A +G+GL + A+    L+I++NC+P
Sbjct: 369  KEAGEVLDQWKKSTTTDFDLSACSRLLDAFSGSGLTEIANDFHMLLIERNCDP 421


>ref|XP_003545705.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
            mitochondrial-like [Glycine max]
          Length = 399

 Score =  463 bits (1192), Expect = e-128
 Identities = 240/399 (60%), Positives = 304/399 (76%), Gaps = 2/399 (0%)
 Frame = +3

Query: 33   MTMRSLSSLLKRTLIERMNSYPALKLNQTRFLSNPFSSIPLESDDDLEESKQ--DDLKTK 206
            M  RSL   L+R    R NS  A  LN+TRF+S+        S D +EES +  DDL+++
Sbjct: 1    MAHRSLFLSLRRFSSCR-NSGLACVLNRTRFVSSG-----AVSSDLVEESVEGDDDLRSR 54

Query: 207  IFRLRFSKRSVTTLLEKWVADGNNVTLFELRNIARDLNKSQRYKHALEISEWMVRNQEFE 386
            IFRLR  KRS T +L+KWV  GN +TL +LR+I+++L +SQRYKHALEISEWMV N+E+E
Sbjct: 55   IFRLRLPKRSATNVLQKWVLQGNPITLSQLRDISKELRRSQRYKHALEISEWMVSNEEYE 114

Query: 387  LSDSDYGVRIDLMTKVFGIDAAERYFEGLPLEVKTGETYTSLLHSYAGAKMTERAENFFQ 566
            LSDSDY VRIDLMT+VFGIDAAERYFEGLPL  KT ETYT+LLHSYAGAK+TE+AE  +Q
Sbjct: 115  LSDSDYAVRIDLMTQVFGIDAAERYFEGLPLATKTTETYTALLHSYAGAKLTEKAEELYQ 174

Query: 567  RVKEENVSLNAMMYNEMMTLYMSVGQLEKVPSVIEDMKRRKVSLDLFTYNLWISACAANL 746
            R+K+ N+S +A+ YNEMMTLYMSVGQ EKVP V+E++K++KVS D+FTYNLWIS+CAA L
Sbjct: 175  RIKDSNLSFDALTYNEMMTLYMSVGQFEKVPIVVEELKQQKVSPDIFTYNLWISSCAAIL 234

Query: 747  DLDSVKSILDEMSCDPNSDGGWEIYRQLTSIYINAGNLVNSDGTSVVETERKITQRESIT 926
            ++D V+ ILDEMS    S+  W  Y  L +IYI+  +L N+   ++VETE++ITQR+ IT
Sbjct: 235  NIDEVRRILDEMSHGAGSNESWIRYLNLANIYISVAHLDNASSNTLVETEKRITQRQWIT 294

Query: 927  YDFLIILYTGLKNKEKINQIWKSLRMAPMKMTSRNYICVISSYLMLGHFKEVDEVFEQWK 1106
            YDFLIILY GL +K+K++QIW SL M   KM SRNY+C+ISSYLMLG  KEV EV +QWK
Sbjct: 295  YDFLIILYGGLGSKDKLDQIWNSLGMTKQKMISRNYMCIISSYLMLGLTKEVGEVIDQWK 354

Query: 1107 QSTTTDFDSYACSRLLSAVAGAGLVDKADGLRALMIQKN 1223
            QSTTTDFD  AC ++L A    GL + A+ L  ++I+KN
Sbjct: 355  QSTTTDFDMLACKKILVAFRDIGLAEIANNLNVILIEKN 393


>ref|XP_002323959.1| predicted protein [Populus trichocarpa] gi|222866961|gb|EEF04092.1|
            predicted protein [Populus trichocarpa]
          Length = 355

 Score =  458 bits (1178), Expect = e-126
 Identities = 219/352 (62%), Positives = 284/352 (80%), Gaps = 2/352 (0%)
 Frame = +3

Query: 177  ESKQDDLKTKIFRLRFSKRSVTTLLEKWVADGNNVTLFELRNIARDLNKSQRYKHALEIS 356
            +  +DDLK +IFRLR  KRSVT +++KWV +GN V+  ELR+I+++L KSQR+KHALEIS
Sbjct: 4    KENEDDLKGRIFRLRLPKRSVTNVIDKWVREGNTVSSSELRHISKELRKSQRFKHALEIS 63

Query: 357  EWMVRNQEFELSDSDYGVRIDLMTKVFGIDAAERYFEGLPLEVKTGETYTSLLHSYAGAK 536
            EWMV ++EFELSD+D+  RIDLMTKVFG+DAAERYF+GLPL  KT ETYT+LLHSYA AK
Sbjct: 64   EWMVAHEEFELSDTDHASRIDLMTKVFGVDAAERYFDGLPLAAKTTETYTALLHSYAAAK 123

Query: 537  MTERAENFFQRVKEENVSLNAMMYNEMMTLYMSVGQLEKVPSVIEDMKRRKVSLDLFTYN 716
            + E+AE F++R+K  N+   A+MYNEMMTLYMSVGQLEKV  V+E++K +KV+ D+FTYN
Sbjct: 124  LIEKAEEFYKRIKGSNLPFTALMYNEMMTLYMSVGQLEKVSQVVEELKHQKVAPDIFTYN 183

Query: 717  LWISACAANLDLDSVKSILDEMSCDPNSDGGWEIYRQLTSIYINAGNLVNSDGT--SVVE 890
            LWIS+CAA L++D V+ ILDEMS D   +  W  Y ++ +IY+ AG+LVN++ +  +VVE
Sbjct: 184  LWISSCAAALNIDKVRRILDEMSQDSGVNDDWMRYIKIVNIYVTAGHLVNAESSTAAVVE 243

Query: 891  TERKITQRESITYDFLIILYTGLKNKEKINQIWKSLRMAPMKMTSRNYICVISSYLMLGH 1070
             E+KITQRE ITYDFL+ILY GL  K+KI+QIWKSLRM   KMTSRN++C++SSYLMLGH
Sbjct: 244  AEKKITQREWITYDFLVILYAGLGKKDKIDQIWKSLRMTNQKMTSRNFVCILSSYLMLGH 303

Query: 1071 FKEVDEVFEQWKQSTTTDFDSYACSRLLSAVAGAGLVDKADGLRALMIQKNC 1226
             KEV E+ +QWKQSTTTDFD  AC+RLL A++  GL + A+    L+I++NC
Sbjct: 304  LKEVGEIVDQWKQSTTTDFDISACNRLLDAISCLGLTEIANNFHMLLIERNC 355


>ref|XP_002268952.2| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
            mitochondrial [Vitis vinifera]
          Length = 396

 Score =  452 bits (1164), Expect = e-125
 Identities = 227/378 (60%), Positives = 290/378 (76%), Gaps = 4/378 (1%)
 Frame = +3

Query: 120  RFLSNPFSSIPLESDDDLEES----KQDDLKTKIFRLRFSKRSVTTLLEKWVADGNNVTL 287
            +F     SS  L S+  LEES    + DDLK++IF+LR  KRSVT +L++W+ +GN V +
Sbjct: 18   KFAFRLLSSRTLRSEV-LEESPNSPENDDLKSRIFKLRLPKRSVTNVLQRWLGEGNQVHI 76

Query: 288  FELRNIARDLNKSQRYKHALEISEWMVRNQEFELSDSDYGVRIDLMTKVFGIDAAERYFE 467
             ELRNI+++L ++QRYKHALEISEWMV + EFELSDSD  VRIDLMT+VFGIDAAERYFE
Sbjct: 77   SELRNISKELRRAQRYKHALEISEWMVSHDEFELSDSDNAVRIDLMTRVFGIDAAERYFE 136

Query: 468  GLPLEVKTGETYTSLLHSYAGAKMTERAENFFQRVKEENVSLNAMMYNEMMTLYMSVGQL 647
            GLP   KT ETYT+LLHSYAGAK+ E+AE  ++R+KE NV LN ++YNEMMTLYMSVGQ+
Sbjct: 137  GLPSAAKTSETYTALLHSYAGAKLAEKAEELYERIKESNVPLNILLYNEMMTLYMSVGQV 196

Query: 648  EKVPSVIEDMKRRKVSLDLFTYNLWISACAANLDLDSVKSILDEMSCDPNSDGGWEIYRQ 827
            EKV  V+E++KR+KV  DLFTYNLW+S+CAA LD+D V+ IL EMS + +++ GW  YR 
Sbjct: 197  EKVSLVVEELKRQKVVPDLFTYNLWVSSCAATLDIDGVRRILKEMSNNSSANDGWVRYRN 256

Query: 828  LTSIYINAGNLVNSDGTSVVETERKITQRESITYDFLIILYTGLKNKEKINQIWKSLRMA 1007
            L +IYI AG+LVNS   SVVE     TQR+ ITYDFLIILY GL NK+KI+QIWKSL+M 
Sbjct: 257  LANIYIMAGHLVNSASNSVVEAGTNTTQRDWITYDFLIILYAGLGNKDKIDQIWKSLKMT 316

Query: 1008 PMKMTSRNYICVISSYLMLGHFKEVDEVFEQWKQSTTTDFDSYACSRLLSAVAGAGLVDK 1187
              K+ SR+Y+C++SSY+MLGH K+V  V ++WK+STTTDFD     RLL A A   L+++
Sbjct: 317  KQKIKSRSYVCILSSYVMLGHIKDVGIVIDEWKKSTTTDFDISVFYRLLDAFAELRLIEE 376

Query: 1188 ADGLRALMIQKNCNPEDE 1241
            A+    L+I+K+C P DE
Sbjct: 377  AETFHKLLIRKSCLPTDE 394