BLASTX nr result

ID: Coptis21_contig00017189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017189
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269437.1| PREDICTED: protein LURP-one-related 4 [Vitis...    89   5e-16
emb|CBI34692.3| unnamed protein product [Vitis vinifera]               87   1e-15
ref|XP_002304253.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15
emb|CBI34691.3| unnamed protein product [Vitis vinifera]               83   2e-14
ref|XP_002269469.1| PREDICTED: protein LURP-one-related 4 [Vitis...    83   2e-14

>ref|XP_002269437.1| PREDICTED: protein LURP-one-related 4 [Vitis vinifera]
          Length = 204

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 46/90 (51%), Positives = 62/90 (68%)
 Frame = +2

Query: 26  SPCEVIIMGWDEAAGQSNKSCYHIEGCSGKVDYCKIVNQTGGLVAEVMQKQSGSGIALGE 205
           S C+V +        ++   CY I+G +GK  + KIV+  GGL+AEV QKQ+ SG+ LGE
Sbjct: 121 SSCQVTVR-----PNEAQSYCYRIQGLTGKSAF-KIVDSQGGLLAEVEQKQTSSGVVLGE 174

Query: 206 DVMKLVVEANVDHSLVMGIVIVYSLMNHRM 295
           DV+ LVVE +VDHSLVM +V VY L++HRM
Sbjct: 175 DVLNLVVEPHVDHSLVMALVAVYGLIHHRM 204


>emb|CBI34692.3| unnamed protein product [Vitis vinifera]
          Length = 210

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 45/90 (50%), Positives = 62/90 (68%)
 Frame = +2

Query: 26  SPCEVIIMGWDEAAGQSNKSCYHIEGCSGKVDYCKIVNQTGGLVAEVMQKQSGSGIALGE 205
           S C+V +        ++   CY I+G +GK  + KIV+  GGL+AEV QKQ+ SG+ LGE
Sbjct: 121 SSCQVTVR-----PNEAQSYCYRIQGLTGKSAF-KIVDSQGGLLAEVEQKQTSSGVVLGE 174

Query: 206 DVMKLVVEANVDHSLVMGIVIVYSLMNHRM 295
           DV+ LVVE +VDHSLVM +V VY L++HR+
Sbjct: 175 DVLNLVVEPHVDHSLVMALVAVYGLIHHRI 204


>ref|XP_002304253.1| predicted protein [Populus trichocarpa] gi|222841685|gb|EEE79232.1|
           predicted protein [Populus trichocarpa]
          Length = 199

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 49/104 (47%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
 Frame = +2

Query: 2   FRVKEAYR-----SPCEVIIMGWDEAAGQSNKSC-YHIEGCSGKVDYCKIVNQTGGLVAE 163
           F+V++  R     +PC + + G D+     N+ C Y IE  + K  Y KIV++ GGL+AE
Sbjct: 103 FQVRKTLRLLRGDAPCNITV-GLDK-----NQPCQYMIESWTSKSTY-KIVDKCGGLIAE 155

Query: 164 VMQKQSGSGIALGEDVMKLVVEANVDHSLVMGIVIVYSLMNHRM 295
           V +KQS  G+ LGEDVM +VVE  +DHSL+MG+V+VYSL+N +M
Sbjct: 156 VQRKQSACGVVLGEDVMTMVVEPFIDHSLIMGLVVVYSLINSKM 199


>emb|CBI34691.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 48/91 (52%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
 Frame = +2

Query: 26  SPCEVIIMGWDEAAGQSNKSCYH-IEGCSGKVDYCKIVNQTGGLVAEVMQKQSGSGIALG 202
           S CEV +   +EA     +SCY+ I+G +GK  + KIVN  GG++AEV QKQ+ SG+ LG
Sbjct: 316 SSCEVTVRP-NEA-----QSCYYRIQGLAGKSTF-KIVNSEGGVMAEVKQKQTSSGVVLG 368

Query: 203 EDVMKLVVEANVDHSLVMGIVIVYSLMNHRM 295
           +DV+ LVVE +VDHSLVM +V V  L++HRM
Sbjct: 369 DDVLNLVVEPHVDHSLVMALVAVCGLIHHRM 399



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 39/80 (48%), Positives = 53/80 (66%)
 Frame = +2

Query: 26  SPCEVIIMGWDEAAGQSNKSCYHIEGCSGKVDYCKIVNQTGGLVAEVMQKQSGSGIALGE 205
           S CEV +        ++    Y I+G +GK  + KIVN  GG++AEV QKQ+ SG+ LG+
Sbjct: 119 SSCEVTVR-----PNEAQSYHYRIQGLAGKSTF-KIVNSEGGVMAEVKQKQTSSGVVLGD 172

Query: 206 DVMKLVVEANVDHSLVMGIV 265
           DV+ LVVE +VDHSLVM +V
Sbjct: 173 DVLDLVVEPHVDHSLVMALV 192


>ref|XP_002269469.1| PREDICTED: protein LURP-one-related 4 [Vitis vinifera]
          Length = 206

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 48/91 (52%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
 Frame = +2

Query: 26  SPCEVIIMGWDEAAGQSNKSCYH-IEGCSGKVDYCKIVNQTGGLVAEVMQKQSGSGIALG 202
           S CEV +   +EA     +SCY+ I+G +GK  + KIVN  GG++AEV QKQ+ SG+ LG
Sbjct: 123 SSCEVTVRP-NEA-----QSCYYRIQGLAGKSTF-KIVNSEGGVMAEVKQKQTSSGVVLG 175

Query: 203 EDVMKLVVEANVDHSLVMGIVIVYSLMNHRM 295
           +DV+ LVVE +VDHSLVM +V V  L++HRM
Sbjct: 176 DDVLNLVVEPHVDHSLVMALVAVCGLIHHRM 206


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