BLASTX nr result

ID: Coptis21_contig00017187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017187
         (1426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271655.2| PREDICTED: uncharacterized protein LOC100258...   335   1e-89
gb|AFP55540.1| hypothetical protein [Rosa rugosa]                     300   5e-79
ref|XP_002515683.1| conserved hypothetical protein [Ricinus comm...   283   6e-74
ref|XP_004155706.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   280   7e-73
ref|XP_004142595.1| PREDICTED: uncharacterized protein LOC101209...   280   7e-73

>ref|XP_002271655.2| PREDICTED: uncharacterized protein LOC100258836 [Vitis vinifera]
          Length = 2390

 Score =  335 bits (860), Expect = 1e-89
 Identities = 177/342 (51%), Positives = 228/342 (66%), Gaps = 1/342 (0%)
 Frame = +3

Query: 336  NQLKQKWDKYKHPRKLKKGISIFVSSRGEHVAVAVGNKITILQKRDNYKEPCGIFTSHNR 515
            +Q+K+KW  Y+ P+KLK+ +S+FVS RGE VAVA GN+ITILQK DNY+EPCGIFTS N 
Sbjct: 41   SQIKEKWSDYRRPKKLKRWVSLFVSLRGERVAVAAGNQITILQKDDNYQEPCGIFTS-NS 99

Query: 516  RATFTLGAWSDSHNVFGAVDDTDTLFFIKPNGEVIKRIAKSELKVAAPIVGLVVLGGPDA 695
              TF  GAWS+SH+V G  DD++TL+FIK NGE + R  ++ LKV++PI+GL+     D 
Sbjct: 100  LGTFIYGAWSESHDVLGVCDDSETLYFIKGNGEEMARSTRAHLKVSSPIIGLIPQDDSDT 159

Query: 696  KTSCLCIFIVLTSDGLLHQVEVGQKTYAHISSMLTSSTHLSPNKQLYRNVFCIDYCPEFS 875
            + SCLC F +LTSDG LH +E+ Q     ISS  TSS  L+  KQ  ++VFC+DY  + S
Sbjct: 160  RGSCLCSFNLLTSDGFLHNIEISQDPAVSISSFRTSSNGLTLKKQFPQHVFCLDYHVKLS 219

Query: 876  LLVVVGTTFNISGKSSDNAELCCLSLWHIKGDLDIDLVSYTPQLEGFYSIPKGYEGLLTT 1055
            LL+VVG+  +IS  SS       LSLW     LD++ V  T Q+EG YS PKGY G +T+
Sbjct: 220  LLIVVGSASSISITSSGTTGSHHLSLWRRSSSLDLEPVCST-QVEGLYSKPKGYIGQITS 278

Query: 1056 PKVVFSPQSKRIAALDSAGGLDVFVLDGERSSLSIIDFKQSGHSQ-TAKLSNGKRNFLNN 1232
             KV+ SP  K +A LD  G LD+F LDGE  SLS   +     SQ T  LSN    FLN 
Sbjct: 279  SKVLISPHGKFVATLDLTGCLDIFKLDGECCSLSSFAYGMRNDSQETDNLSNEVGKFLNG 338

Query: 1233 ITDFTWWSDRVLIIAEMSGVVSMIDIFTGKRLLDDDPKFCMP 1358
            I DFTWWSD  L++A+ SG V M+DI +G +LL +DP + MP
Sbjct: 339  IVDFTWWSDHTLVLAKRSGTVIMLDILSGIKLLGNDPVYSMP 380


>gb|AFP55540.1| hypothetical protein [Rosa rugosa]
          Length = 2445

 Score =  300 bits (769), Expect = 5e-79
 Identities = 169/389 (43%), Positives = 230/389 (59%), Gaps = 1/389 (0%)
 Frame = +3

Query: 195  VLYETIHHITRPFSSTYPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQLKQKWDKYKHP 374
            V +ET  HITRP S  YPP                            +QL++KW++YK P
Sbjct: 8    VFFETKRHITRPCSPNYPPQQANDGGKGNIRSLLSFRGI--------SQLREKWNEYKKP 59

Query: 375  RKLKKGISIFVSSRGEHVAVAVGNKITILQKRDNYKEPCGIFTSHNRRATFTLGAWSDSH 554
            +K+++  S+F+S RGEHVAV  GN+ITIL+K D+Y EPCG FTS +  A+FT G WS+SH
Sbjct: 60   KKMRRLTSLFISPRGEHVAVVAGNQITILKKEDDYSEPCGTFTSGSP-ASFTTGTWSESH 118

Query: 555  NVFGAVDDTDTLFFIKPNGEVIKRIAKSELKVAAPIVGLVVLGGPDAKTSCLCIFIVLTS 734
            +V G  DDTDTL+FIK NG  I RI++ +LKV+ P++ LVVL   D + SCLC FI++TS
Sbjct: 119  DVLGVSDDTDTLYFIKANGSEIVRISRRQLKVSLPVISLVVLDDSDVQKSCLCSFIIITS 178

Query: 735  DGLLHQVEVGQKTYAHISSMLTSSTHLSPNKQLYRNVFCIDYCPEFSLLVVVGTTFNISG 914
            DG L  +E+ Q   + I S  TS   L+   Q    V C+DY PE SLL  V  T   SG
Sbjct: 179  DGTLQHIEISQDPSSSIYSAQTSHNGLTVKGQSAHIVLCVDYHPELSLLAGVTLT---SG 235

Query: 915  KSSDNAELCCLSLWHIKGDLDIDLVSYTPQLEGFYSIPKGYEGLLTTPKVVFSPQSKRIA 1094
                    C +SLW   G +D++ + +T Q +GFYS P      L  PKV+ SPQ+K +A
Sbjct: 236  S-------CYISLWRRSGIIDLEQL-FTIQFDGFYSKPIALGSQLAYPKVLISPQAKFVA 287

Query: 1095 ALDSAGGLDVFVLDGERSSLSIIDFKQSGHSQ-TAKLSNGKRNFLNNITDFTWWSDRVLI 1271
             LD  G L VF +D ER SLS    ++   SQ T  LS+G+   L +I DFTWWSD +L 
Sbjct: 288  TLDLTGRLHVFKMDKERFSLSKFTCRERYESQVTNNLSSGEGKELIDIVDFTWWSDHILT 347

Query: 1272 IAEMSGVVSMIDIFTGKRLLDDDPKFCMP 1358
             A+ SG+V+M+D+ +G  + ++   +  P
Sbjct: 348  FAKRSGLVTMLDLLSGLEVEENGTVYSKP 376


>ref|XP_002515683.1| conserved hypothetical protein [Ricinus communis]
            gi|223545226|gb|EEF46735.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2429

 Score =  283 bits (725), Expect = 6e-74
 Identities = 161/389 (41%), Positives = 226/389 (58%), Gaps = 1/389 (0%)
 Frame = +3

Query: 195  VLYETIHHITRPFSSTYPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQLKQKWDKYKHP 374
            V YET  H +RP+ S YPP                             Q+K KW +Y+ P
Sbjct: 9    VFYETRTHASRPYISNYPPQSPKSNEGGKGILSSLFSAPGIC------QIK-KWREYRSP 61

Query: 375  RKLKKGISIFVSSRGEHVAVAVGNKITILQKRDNYKEPCGIFTSHNRRATFTLGAWSDSH 554
             K+KK IS+ +S  GE VAVA G++ITIL+K D+Y+EPCG F S     +F  G WS+SH
Sbjct: 62   VKIKKPISLIISPSGERVAVATGSQITILRKEDDYQEPCGTFMSLLGMLSF--GVWSESH 119

Query: 555  NVFGAVDDTDTLFFIKPNGEVIKRIAKSELKVAAPIVGLVVLGGPDAKTSCLCIFIVLTS 734
            ++ G  D+ DTL+FIK NGE I R+ K +L+VA PI+ ++     DA  SCLC FI+LT+
Sbjct: 120  DILGIADNNDTLYFIKVNGEEITRVTKRQLRVAFPIICMIPQDNTDAHESCLCSFIILTA 179

Query: 735  DGLLHQVEVGQKTYAHISSMLTSSTHLSPNKQLYRNVFCIDYCPEFSLLVVVGTTFNISG 914
            DG LH +E+ Q+    IS   T +  L+  +Q  ++V+C DY P  SLL+VVG+  + S 
Sbjct: 180  DGFLHHIEISQQPTPSISIRQTLNNVLTIRRQFPKDVYCFDYDPAHSLLLVVGSAVSTSI 239

Query: 915  KSSDNAELCCLSLWHIKGDLDIDLVSYTPQLEGFYSIPKGYEGLLTTPKVVFSPQSKRIA 1094
             SS N+  C LSLW    ++D++L+S + Q EG Y   K + G +  PKV+ SP+   +A
Sbjct: 240  ASSGNSGSCQLSLWRRCPNVDLELLS-SVQFEGLYHKSKDFLGQIAYPKVLMSPEGNFVA 298

Query: 1095 ALDSAGGLDVFVLDGERSSLSIIDFKQSGHSQTA-KLSNGKRNFLNNITDFTWWSDRVLI 1271
             LD +G L +F LD E+SSLS I       SQ    L+N  + FLN+  DFTWWSD ++ 
Sbjct: 299  TLDISGCLYIFKLDKEQSSLSSIAVGGRFGSQVIDNLTNRHKEFLNDNIDFTWWSDHIVT 358

Query: 1272 IAEMSGVVSMIDIFTGKRLLDDDPKFCMP 1358
            +A   GV +M++I  G +L   D  + MP
Sbjct: 359  LARRGGVFTMLNILAGLQLQKSDHIYSMP 387


>ref|XP_004155706.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101228677
            [Cucumis sativus]
          Length = 2405

 Score =  280 bits (716), Expect = 7e-73
 Identities = 159/389 (40%), Positives = 220/389 (56%), Gaps = 1/389 (0%)
 Frame = +3

Query: 195  VLYETIHHITRPFSSTYPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQLKQKWDKYKHP 374
            VLYET  H +RPF S YPP                             +LK KW  Y H 
Sbjct: 8    VLYETRRHASRPFPSNYPPHKANEGAKGSLLSLFRIG----------GRLKDKWIGYNHT 57

Query: 375  RKLKKGISIFVSSRGEHVAVAVGNKITILQKRDNYKEPCGIFTSHNRRATFTLGAWSDSH 554
            +++++ +S+F+S  GE VAVAVGN ITIL+K D+Y EP GIF   +   +FT+GAWS+S 
Sbjct: 58   QRIRRLVSLFISPNGERVAVAVGNLITILRKEDDYLEPFGIFLDTSI-TSFTMGAWSESC 116

Query: 555  NVFGAVDDTDTLFFIKPNGEVIKRIAKSELKVAAPIVGLVVLGGPDAKTSCLCIFIVLTS 734
            N+ G +DDTDT++FIK NGE I R+    LKV+ PI+GL+     D + S LC FI++ S
Sbjct: 117  NILGVIDDTDTIYFIKSNGEEISRVTGKRLKVSLPIIGLIAKENSDTQRSYLCTFIIVAS 176

Query: 735  DGLLHQVEVGQKTYAHISSMLTSSTHLSPNKQLYRNVFCIDYCPEFSLLVVVGTTFNISG 914
            DG + Q+E+ +       S  T+S  L+   Q    VFC DY PE SL ++VG +F+ S 
Sbjct: 177  DGSIRQMEISKDPTISFLSAHTNS-GLTTKSQFPNKVFCFDYSPELSLFLIVG-SFSTSI 234

Query: 915  KSSDNAELCCLSLWHIKGDLDIDLVSYTPQLEGFYSIPKGYEGLLTTPKVVFSPQSKRIA 1094
             S  N+  C L+LW   G  D++L+ Y+ Q +G Y IPKGYEG  +  K+  SP+++ IA
Sbjct: 235  PSGRNSGSCYLTLWR-SGVFDLELL-YSIQFDGLYFIPKGYEGQTSYSKLQVSPKAQFIA 292

Query: 1095 ALDSAGGLDVFVLDGERSSLSIIDFKQSGHSQ-TAKLSNGKRNFLNNITDFTWWSDRVLI 1271
             LD  G L +F L  E  ++S   F     S+ T K  N       +I DFTWWSD +L 
Sbjct: 293  TLDVTGQLFIFNLQREHFTISSFSFPGKHKSKSTDKTLNETNRIFYDILDFTWWSDHILT 352

Query: 1272 IAEMSGVVSMIDIFTGKRLLDDDPKFCMP 1358
            +A   G+V MIDI +G  + +D P +  P
Sbjct: 353  VARRGGLVVMIDILSGINVQEDSPMYSRP 381


>ref|XP_004142595.1| PREDICTED: uncharacterized protein LOC101209372 [Cucumis sativus]
          Length = 2405

 Score =  280 bits (716), Expect = 7e-73
 Identities = 159/389 (40%), Positives = 220/389 (56%), Gaps = 1/389 (0%)
 Frame = +3

Query: 195  VLYETIHHITRPFSSTYPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQLKQKWDKYKHP 374
            VLYET  H +RPF S YPP                             +LK KW  Y H 
Sbjct: 8    VLYETRRHASRPFPSNYPPHKANEGAKGSLLSLFRIG----------GRLKDKWIGYNHT 57

Query: 375  RKLKKGISIFVSSRGEHVAVAVGNKITILQKRDNYKEPCGIFTSHNRRATFTLGAWSDSH 554
            +++++ +S+F+S  GE VAVAVGN ITIL+K D+Y EP GIF   +   +FT+GAWS+S 
Sbjct: 58   QRIRRLVSLFISPNGERVAVAVGNLITILRKEDDYLEPFGIFLDTSI-TSFTMGAWSESC 116

Query: 555  NVFGAVDDTDTLFFIKPNGEVIKRIAKSELKVAAPIVGLVVLGGPDAKTSCLCIFIVLTS 734
            N+ G +DDTDT++FIK NGE I R+    LKV+ PI+GL+     D + S LC FI++ S
Sbjct: 117  NILGVIDDTDTIYFIKSNGEEISRVTGKRLKVSLPIIGLIAKENSDTQRSYLCTFIIVAS 176

Query: 735  DGLLHQVEVGQKTYAHISSMLTSSTHLSPNKQLYRNVFCIDYCPEFSLLVVVGTTFNISG 914
            DG + Q+E+ +       S  T+S  L+   Q    VFC DY PE SL ++VG +F+ S 
Sbjct: 177  DGSIRQMEISKDPTISFLSAHTNS-GLTTKSQFPNKVFCFDYSPELSLFLIVG-SFSTSI 234

Query: 915  KSSDNAELCCLSLWHIKGDLDIDLVSYTPQLEGFYSIPKGYEGLLTTPKVVFSPQSKRIA 1094
             S  N+  C L+LW   G  D++L+ Y+ Q +G Y IPKGYEG  +  K+  SP+++ IA
Sbjct: 235  PSGRNSGSCYLTLWR-SGVFDLELL-YSIQFDGLYFIPKGYEGQTSYSKLQVSPKAQFIA 292

Query: 1095 ALDSAGGLDVFVLDGERSSLSIIDFKQSGHSQ-TAKLSNGKRNFLNNITDFTWWSDRVLI 1271
             LD  G L +F L  E  ++S   F     S+ T K  N       +I DFTWWSD +L 
Sbjct: 293  TLDVTGQLFIFNLQREHFTISSFSFPGKHKSKSTDKTLNETNRIFYDILDFTWWSDHILT 352

Query: 1272 IAEMSGVVSMIDIFTGKRLLDDDPKFCMP 1358
            +A   G+V MIDI +G  + +D P +  P
Sbjct: 353  VARRGGLVVMIDILSGINVQEDSPMYSRP 381


Top