BLASTX nr result
ID: Coptis21_contig00017171
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00017171
(2111 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002524282.1| nucleic acid binding protein, putative [Rici... 540 e-153
ref|XP_002282332.2| PREDICTED: PAP-associated domain-containing ... 547 e-153
ref|XP_002329093.1| predicted protein [Populus trichocarpa] gi|2... 531 e-150
ref|XP_004141224.1| PREDICTED: PAP-associated domain-containing ... 520 e-148
dbj|BAE71308.1| hypothetical protein [Trifolium pratense] 519 e-147
>ref|XP_002524282.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223536473|gb|EEF38121.1| nucleic acid binding protein,
putative [Ricinus communis]
Length = 526
Score = 540 bits (1390), Expect(2) = e-153
Identities = 284/460 (61%), Positives = 344/460 (74%), Gaps = 2/460 (0%)
Frame = +2
Query: 266 DYFSLDVSNDDIDLKVTKQEPPILPTPIENREFES-NKRVLESGWFSANGKFKSPMLQLH 442
D+FSLDV ++ + P ++ P +++ +S ++ LES WF N +F+SPMLQLH
Sbjct: 71 DFFSLDV----VEAAAEPKTPSVVAEPRKSKAAQSVSETKLESSWFRGNSRFRSPMLQLH 126
Query: 443 KEILDFCEFLSPTLEEQAARNAAVEAVFGVIKHIWPNCNVEVFGSFKTGLYLPTSDIDVV 622
KEI+DFC+FLSPT EE+ ARN AV+ VF VIK+IWPNC VEVFGS+KTGLYLPTSDIDVV
Sbjct: 127 KEIVDFCDFLSPTPEEEDARNTAVKCVFDVIKYIWPNCKVEVFGSYKTGLYLPTSDIDVV 186
Query: 623 ILDSKVKTPQIGLVALSRALTQRGIAKKMQVIAKARVPIIKFIEKRSGVAFDISFDVQNG 802
I S +K PQIGL ALSRAL+Q+GIAKK+QVIAKARVPI+KF+EKRSGV+FDISFDV NG
Sbjct: 187 IFRSGIKNPQIGLQALSRALSQKGIAKKIQVIAKARVPIVKFVEKRSGVSFDISFDVDNG 246
Query: 803 PKAAVFIKDAISRIPALRPLCLILKVFLQQRELNEVYSGGIGSYALLTMLIAQLQMHWKG 982
PKAA FIKDA+ + PALRPL LILKVFLQQRELNEVYSGGIGSYALLTML+A L
Sbjct: 247 PKAAEFIKDAVRKWPALRPLSLILKVFLQQRELNEVYSGGIGSYALLTMLMAVL------ 300
Query: 983 QYYQSSKASPEQNLGILLVNFFDFYGRKLNIYDVGVSCKDAGTFFLKNRKGFLNEDRPYL 1162
KAS E NLG+LLV FFDFYGRKLN DVGVSCK AGTFF K +KGF+N+ RP+L
Sbjct: 301 ------KASSEHNLGVLLVYFFDFYGRKLNTTDVGVSCKGAGTFFSKRKKGFMNKGRPFL 354
Query: 1163 LSIEDPQAPENDIGRSSFNFSQIRSAFGMAFSTLTNEKTXXXXXXXXXXXXTIIRPDSIL 1342
++IEDPQAP+NDIG++SFN+SQIRSAF MAFSTLTN +T TIIRPDSIL
Sbjct: 355 IAIEDPQAPDNDIGKNSFNYSQIRSAFSMAFSTLTNPRTILSLGPNRSILGTIIRPDSIL 414
Query: 1343 LERKGGANGEVTFDSLLPGAGEPLLAQEQSEQEMMFNWQFDEEEPLPRQNGNLGEDS-LN 1519
LERK G NGEVTF SLLPGAGE L+ QE++ NWQ D++E + + G + EDS
Sbjct: 415 LERKAGCNGEVTFSSLLPGAGE-LIQSHYDHQEILGNWQLDDDEEVLPRGGGIAEDSGAQ 473
Query: 1520 SSGKRKKVLREKRISLSNGREVVQRNYHANKLRKRWKSQK 1639
SSGK++K ++K + + ++ + RK K Q+
Sbjct: 474 SSGKKRKSSKDKSTKREENGSIGKVSHEESGSRKDRKKQR 513
Score = 32.3 bits (72), Expect(2) = e-153
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 51 VYETLAPLSSST--DSPQLTESLIPNSPEPYSVFRNQV 158
+Y+TL+PLS T SP+ + P P+SVFRN++
Sbjct: 18 LYQTLSPLSLPTPDQSPRSDDDGDHRHPNPFSVFRNEI 55
>ref|XP_002282332.2| PREDICTED: PAP-associated domain-containing protein 5-like [Vitis
vinifera] gi|302143015|emb|CBI20310.3| unnamed protein
product [Vitis vinifera]
Length = 497
Score = 547 bits (1409), Expect = e-153
Identities = 293/459 (63%), Positives = 344/459 (74%), Gaps = 2/459 (0%)
Frame = +2
Query: 266 DYFSLDVSNDDIDLKVTKQEPPILPTPIENREFESNKRVLESGWFSANGKFKSPMLQLHK 445
DYFSLD D V + P TP E E+ +ESGWF N + +SPML+LHK
Sbjct: 55 DYFSLDARAD-----VEEPSPARFRTPPPASEEEAP--AVESGWFRGNSRLRSPMLKLHK 107
Query: 446 EILDFCEFLSPTLEEQAARNAAVEAVFGVIKHIWPNCNVEVFGSFKTGLYLPTSDIDVVI 625
EILDF +FLSPT +EQ+ARNAA+E+VF VI++IWPNC VEVFGSFKTGLYLPTSDIDVVI
Sbjct: 108 EILDFSDFLSPTPKEQSARNAAIESVFNVIRYIWPNCKVEVFGSFKTGLYLPTSDIDVVI 167
Query: 626 LDSKVKTPQIGLVALSRALTQRGIAKKMQVIAKARVPIIKFIEKRSGVAFDISFDVQNGP 805
L S +KTPQIGL ALSRAL+Q+GIAKK+QVIAKARVPIIKFIEKRS VAFDISFDV+NGP
Sbjct: 168 LGSDIKTPQIGLYALSRALSQKGIAKKIQVIAKARVPIIKFIEKRSSVAFDISFDVENGP 227
Query: 806 KAAVFIKDAISRIPALRPLCLILKVFLQQRELNEVYSGGIGSYALLTMLIAQLQMHWKGQ 985
KAA +I+DAIS+ P LRPLCLILKVFLQQRELNEVYSGGIGSYALL MLIA L Q
Sbjct: 228 KAAEYIQDAISKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLAMLIAML------Q 281
Query: 986 YYQSSKASPEQNLGILLVNFFDFYGRKLNIYDVGVSCKDAGTFFLKNRKGFLNEDRPYLL 1165
Q AS E NLG+LLVNFFDFYGRKLN D+GV+C GTFFLK+ KGF+N+ + +L+
Sbjct: 282 NLQEWNASVEHNLGVLLVNFFDFYGRKLNTVDIGVTCNGPGTFFLKSTKGFVNKGQKFLI 341
Query: 1166 SIEDPQAPENDIGRSSFNFSQIRSAFGMAFSTLTNEKTXXXXXXXXXXXXTIIRPDSILL 1345
SIEDPQ P NDIG++SFN+ QIRSAF MAFSTLTN +T TIIRPD ILL
Sbjct: 342 SIEDPQLPGNDIGKNSFNYFQIRSAFSMAFSTLTNARTILGLDPNRSILGTIIRPDPILL 401
Query: 1346 ERKGGANGEVTFDSLLPGAGEPLLAQEQSEQEMMFNWQFD--EEEPLPRQNGNLGEDSLN 1519
ERKGG+NG +TFD LLPGAGEP L+ + QE++ NWQ + EEEPLPR N G+ S N
Sbjct: 402 ERKGGSNGTMTFDHLLPGAGEP-LSPQTGGQELLCNWQVEDAEEEPLPRSNPIAGDGSAN 460
Query: 1520 SSGKRKKVLREKRISLSNGREVVQRNYHANKLRKRWKSQ 1636
SSGK++K +E+ + +E +K ++RWK Q
Sbjct: 461 SSGKKRKASKER--LRNKVKEHADMEKDKSKKKRRWKHQ 497
>ref|XP_002329093.1| predicted protein [Populus trichocarpa] gi|222869762|gb|EEF06893.1|
predicted protein [Populus trichocarpa]
Length = 543
Score = 531 bits (1367), Expect(2) = e-150
Identities = 288/483 (59%), Positives = 349/483 (72%), Gaps = 23/483 (4%)
Frame = +2
Query: 266 DYFSLDVSNDDIDLKVTKQEPPILPTPIENREFESNKR-----------VLESGWFSANG 412
D+FSLDV + D +E L TP+ N E + ++ + ES WF +
Sbjct: 65 DFFSLDVGSGD-------EEELELKTPV-NGEAKGKRKAEVETENLPEPMTESVWFRGDS 116
Query: 413 KFKSPMLQLHKEILDFCEFLSPTLEEQAARNAAVEAVFGVIKHIWPNCNVEVFGSFKTGL 592
KF+SPMLQLHKEI+DFC+FLSPT EEQA+R AV VF VIK+IWPNC VEVFGSF+TGL
Sbjct: 117 KFRSPMLQLHKEIVDFCDFLSPTQEEQASRAEAVRCVFDVIKYIWPNCKVEVFGSFRTGL 176
Query: 593 YLPTSDIDVVILDSKVKTPQIGLVALSRALTQRGIAKKMQVIAKARVPIIKFIEKRSGVA 772
YLPTSDIDVVIL S +K+PQIGL ALSRAL+Q+G+AKK+QVIA+ARVPI+KF+EKRSGV+
Sbjct: 177 YLPTSDIDVVILGSGLKSPQIGLNALSRALSQKGVAKKIQVIARARVPIVKFVEKRSGVS 236
Query: 773 FDISFDVQNGPKAAVFIKDAISRIPALRPLCLILKVFLQQRELNEVYSGGIGSYALLTML 952
FDISFDV GP AA FIK+AIS+ P LRPLCLILKVFLQQRELNEVYSGGI SYALL ML
Sbjct: 237 FDISFDVNGGPIAAEFIKNAISKWPELRPLCLILKVFLQQRELNEVYSGGISSYALLAML 296
Query: 953 IAQLQMHWKGQYYQSSKASPEQNLGILLVNFFDFYGRKLNIYDVGVSCKDAGTFFLKNRK 1132
+A LQ H + +AS E+NLG+LL++FFDFYGRKLN +VGVSCK GTFF K K
Sbjct: 297 MAMLQNH------RECQASLERNLGLLLIHFFDFYGRKLNTTNVGVSCKGTGTFFSKRTK 350
Query: 1133 GFLNEDRPYLLSIEDPQAPENDIGRSSFNFSQIRSAFGMAFSTLTNEKTXXXXXXXXXXX 1312
GF+N RP+L++IEDPQAPENDIG++SFN+ QIRSAF MAF+TLTN KT
Sbjct: 351 GFMNNGRPFLIAIEDPQAPENDIGKNSFNYFQIRSAFAMAFTTLTNPKTILSLGPNRSIL 410
Query: 1313 XTIIRPDSILLERKGGANGEVTFDSLLPGAGEPLLAQEQSEQEMMFNWQF-DEEEPLPRQ 1489
TIIRPD +LLERKGG NGEVTF SLLPGAGEP L +QE++ NWQ DEEE LPR
Sbjct: 411 GTIIRPDPVLLERKGGKNGEVTFSSLLPGAGEP-LQSNYGQQEILCNWQLDDEEEALPRG 469
Query: 1490 NGNLGEDSLNSSGKRKKVLRE----KRISLSNG-------REVVQRNYHANKLRKRWKSQ 1636
G+ G+ S +SSGK++K + K+ S NG E + + K ++RW+
Sbjct: 470 GGDAGDGSAHSSGKKRKASSKEKSRKKKSKENGDIGKVRHDESGSKKEKSTKKKQRWRKN 529
Query: 1637 KNA 1645
++
Sbjct: 530 DSS 532
Score = 30.0 bits (66), Expect(2) = e-150
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +3
Query: 27 PMEVQQDFVYETLAPLSSSTDSPQLTESLIPNSP--EPYSVFRNQV 158
P++ Q +YETL L+ + SP T P S +PYSVFRN++
Sbjct: 4 PVQAQAIPLYETLT-LTPLSPSPTATPIRSPLSDPLQPYSVFRNEI 48
>ref|XP_004141224.1| PREDICTED: PAP-associated domain-containing protein 5-like [Cucumis
sativus]
Length = 544
Score = 520 bits (1339), Expect(2) = e-148
Identities = 282/464 (60%), Positives = 337/464 (72%), Gaps = 6/464 (1%)
Frame = +2
Query: 266 DYFSLDVSND--DIDLKVTKQEPPI---LPTPIENREFESNKRVLESGWFSANGKFKSPM 430
++F+LDV+ D + + + P+ L T E E R LESGWF N KSPM
Sbjct: 65 EFFALDVAADKGEENSGICSSPLPVTSALETEPRTPECEDQSR-LESGWFRGNSGLKSPM 123
Query: 431 LQLHKEILDFCEFLSPTLEEQAARNAAVEAVFGVIKHIWPNCNVEVFGSFKTGLYLPTSD 610
LQLHKEI+DFCEFLSPT EE+ AR++AVE VF V+KHIWP+C VEVFGSF+TGLYLPTSD
Sbjct: 124 LQLHKEIVDFCEFLSPTEEERVARDSAVERVFSVVKHIWPHCKVEVFGSFQTGLYLPTSD 183
Query: 611 IDVVILDSKVKTPQIGLVALSRALTQRGIAKKMQVIAKARVPIIKFIEKRSGVAFDISFD 790
IDVVIL S + PQ+GL ALSRAL+Q+GIAKK+QVI KARVPIIKFIEK+SG++FDISFD
Sbjct: 184 IDVVILGSGIPKPQLGLQALSRALSQKGIAKKIQVIGKARVPIIKFIEKQSGISFDISFD 243
Query: 791 VQNGPKAAVFIKDAISRIPALRPLCLILKVFLQQRELNEVYSGGIGSYALLTMLIAQLQM 970
VQNGPKAA FIK A+S+ P LRPLCLILKVFLQQRELNEVYSGG+GSYALLTML+A LQ
Sbjct: 244 VQNGPKAADFIKGAVSKWPPLRPLCLILKVFLQQRELNEVYSGGLGSYALLTMLMAMLQS 303
Query: 971 HWKGQYYQSSKASPEQNLGILLVNFFDFYGRKLNIYDVGVSCKDAGTFFLKNRKGFLNED 1150
+S E NLG+LLV+FFDFYGRKLN DVGVSC G FF K+ +GF+ +
Sbjct: 304 ------INVPPSSLEHNLGVLLVHFFDFYGRKLNTSDVGVSCNAGGIFFSKSYRGFMTKG 357
Query: 1151 RPYLLSIEDPQAPENDIGRSSFNFSQIRSAFGMAFSTLTNEKTXXXXXXXXXXXXTIIRP 1330
RP LLSIEDPQAP+NDIG++SFN+ QIRSAF MA+S LTN KT TIIRP
Sbjct: 358 RPCLLSIEDPQAPDNDIGKNSFNYFQIRSAFAMAYSILTNVKTVLGLGPNRSILGTIIRP 417
Query: 1331 DSILLERKGGANGEVTFDSLLPGAGEPLLAQEQ-SEQEMMFNWQFDEEEPLPRQNGNLGE 1507
D +LL+RKGG +GEVTF+SLLPGAGEP+ E +QEM+ NWQF +EEPLPR N + E
Sbjct: 418 DPVLLKRKGGRHGEVTFNSLLPGAGEPVQQPEYGDDQEMLCNWQFGDEEPLPRGN-DTPE 476
Query: 1508 DSLNSSGKRKKVLREKRISLSNGREVVQRNYHANKLRKRWKSQK 1639
+ S K+++ REK +R + N RK S+K
Sbjct: 477 NVGTPSSKKQRKTREKSRKKEKESHSSKRRHEDNGSRKEQSSKK 520
Score = 35.0 bits (79), Expect(2) = e-148
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Frame = +3
Query: 33 EVQQDFVYETLAPLSSSTDSPQLTESLIPNSP----EPYSVFRNQV 158
E Q ++Y+TL+PLS S + T + +SP EPYSVFRN++
Sbjct: 5 EAVQHYLYDTLSPLSFSAITTTTTGDQL-SSPDVDLEPYSVFRNEI 49
>dbj|BAE71308.1| hypothetical protein [Trifolium pratense]
Length = 518
Score = 519 bits (1337), Expect(2) = e-147
Identities = 277/465 (59%), Positives = 344/465 (73%), Gaps = 10/465 (2%)
Frame = +2
Query: 266 DYFSLDVSNDDIDLKVTKQEPPILPTPIENREFE-SNKRVLESGWFSANGKFKSPMLQLH 442
D+FSLDV+ D+ + + EP TP E + +K LE GWF NGKF+SPMLQLH
Sbjct: 57 DFFSLDVA-DEAEAEDPLPEPK---TPAEPKTPAIEHKPTLEGGWFRGNGKFRSPMLQLH 112
Query: 443 KEILDFCEFLSPTLEEQAARNAAVEAVFGVIKHIWPNCNVEVFGSFKTGLYLPTSDIDVV 622
KEI+DFCEFLSPT EE+A R+AA+E+VF VIKHIWP+C VE+FGSF+TGLYLPTSDIDVV
Sbjct: 113 KEIVDFCEFLSPTPEEKAKRDAAIESVFEVIKHIWPHCQVEIFGSFRTGLYLPTSDIDVV 172
Query: 623 ILDSKVKTPQIGLVALSRALTQRGIAKKMQVIAKARVPIIKFIEKRSGVAFDISFDVQNG 802
IL S + PQIGL A+SR+L+QR +AKK+QVI KARVPIIKF+EK+SG++FDISFD+ NG
Sbjct: 173 ILKSGLPNPQIGLNAISRSLSQRSMAKKIQVIGKARVPIIKFVEKKSGLSFDISFDIDNG 232
Query: 803 PKAAVFIKDAISRIPALRPLCLILKVFLQQRELNEVYSGGIGSYALLTMLIAQLQMHWKG 982
PKAA +I++A+++ P LRPLCLILKVFLQQRELNEVYSGGIGSYALLTML+A L
Sbjct: 233 PKAAEYIQEAVAKWPQLRPLCLILKVFLQQRELNEVYSGGIGSYALLTMLMAML------ 286
Query: 983 QYYQSSKASPEQNLGILLVNFFDFYGRKLNIYDVGVSCKDAGTFFLKNRKGFLNEDRPYL 1162
+ + S+ + E NLG+LLV+FFDFYGRKLN DVGVSC GTFF K+ +GF N+ RP+L
Sbjct: 287 RNVRQSQPTAEHNLGVLLVHFFDFYGRKLNTSDVGVSCIGEGTFFRKSSRGFYNKTRPFL 346
Query: 1163 LSIEDPQAPENDIGRSSFNFSQIRSAFGMAFSTLTNEKTXXXXXXXXXXXXTIIRPDSIL 1342
L I+DPQ P+NDIG++SFN+ Q+RSAF MAF+TLTN K TIIRPD +L
Sbjct: 347 LGIQDPQTPDNDIGKNSFNYFQVRSAFLMAFTTLTNPKVILSLGPNRSILGTIIRPDPVL 406
Query: 1343 LERKGGANGEVTFDSLLPGAGEPLLAQEQSEQEMMFNWQFD-EEEPLPRQNG-NLGEDSL 1516
+ERKGG+NGE+TF+SLLPGAGEP + Q+ E +M+ NWQ D EEEPLPR +G N G +
Sbjct: 407 MERKGGSNGEMTFNSLLPGAGEP-IQQQYGEHDMLCNWQLDFEEEPLPRGDGENTGAEPS 465
Query: 1517 NSSGKRK-----KVLREKRISLSN--GREVVQRNYHANKLRKRWK 1630
S K+K K +E R S N + + H +KR K
Sbjct: 466 RRSSKKKRKSASKENKENRDSRKNKENSSMTENGVHKKHKKKRAK 510
Score = 32.3 bits (72), Expect(2) = e-147
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +3
Query: 30 MEVQQDFVYETLAPLSSSTDSPQLTESLIPNSPEPYSVFRNQV 158
+++ + +Y TL+PL + D P + N+ E YSVFRN++
Sbjct: 4 LQIPETILYTTLSPLPLTADDPPDS-----NNHEQYSVFRNEI 41