BLASTX nr result

ID: Coptis21_contig00017168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00017168
         (1482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280096.2| PREDICTED: uncharacterized protein LOC100249...   160   6e-37
ref|XP_002516729.1| protein with unknown function [Ricinus commu...   156   1e-35
ref|XP_002305812.1| predicted protein [Populus trichocarpa] gi|2...   154   6e-35
ref|XP_002329329.1| predicted protein [Populus trichocarpa] gi|2...   150   6e-34
emb|CAN68344.1| hypothetical protein VITISV_004018 [Vitis vinifera]   150   6e-34

>ref|XP_002280096.2| PREDICTED: uncharacterized protein LOC100249716 [Vitis vinifera]
          Length = 522

 Score =  160 bits (406), Expect = 6e-37
 Identities = 89/166 (53%), Positives = 116/166 (69%), Gaps = 2/166 (1%)
 Frame = +3

Query: 60  ISFYHNKECPDELNEAISSLIFAASRCGEFPELQEIRSVFISRFGKDFAARAVELRSNCG 239
           I+ + NKECPDEL EA+SSLIFA SRCG FPELQ+IR +F+SRFGK+FAARA EL++NCG
Sbjct: 90  ITLFQNKECPDELKEAVSSLIFATSRCGGFPELQQIREMFVSRFGKEFAARAAELQNNCG 149

Query: 240 VNRKIIQKLSTRHPSFESRMKVLQEIATENGITLHLEEEASVTA--KEXXXXXXXXXXXK 413
           VN K+IQ+LSTR  S ESR+KVL EIA+ENGITL LEE+A+++   K+           +
Sbjct: 150 VNLKMIQRLSTRQASLESRLKVLTEIASENGITLSLEEDAALSTEEKQDVNQKQKRKQLE 209

Query: 414 TNITVNMDNAKNGDQTPDVIEEMDQFERDDERSSGSLRTRKRYSDV 551
           +N + N+DN +  D   D  E ++      E  S S++ RK Y DV
Sbjct: 210 SNESANLDNPELKDDNNDFPELIN----CGETLSESVKARK-YRDV 250


>ref|XP_002516729.1| protein with unknown function [Ricinus communis]
           gi|223544102|gb|EEF45627.1| protein with unknown
           function [Ricinus communis]
          Length = 402

 Score =  156 bits (395), Expect = 1e-35
 Identities = 84/158 (53%), Positives = 107/158 (67%)
 Frame = +3

Query: 78  KECPDELNEAISSLIFAASRCGEFPELQEIRSVFISRFGKDFAARAVELRSNCGVNRKII 257
           KEC DE+ EAIS+LIFA+SRCGEFPELQEIR +F S+FGK+FAARA+ELR+NCGVN KII
Sbjct: 97  KECHDEVKEAISTLIFASSRCGEFPELQEIRGIFESKFGKEFAARAIELRNNCGVNPKII 156

Query: 258 QKLSTRHPSFESRMKVLQEIATENGITLHLEEEASVTAKEXXXXXXXXXXXKTNITVNMD 437
           QKLS R PS E+RMKVL+E A+E GI LHLEE+  V A+E           +      +D
Sbjct: 157 QKLSVRRPSLENRMKVLKETASEKGIVLHLEEDTPVVAEEKLDDKKKKMIPQQQQQEEID 216

Query: 438 NAKNGDQTPDVIEEMDQFERDDERSSGSLRTRKRYSDV 551
             +  D+   +IE ++      E+ S S + R +Y DV
Sbjct: 217 ETEPQDKPLVLIEVLNPV----EKLSKSTKARNKYRDV 250


>ref|XP_002305812.1| predicted protein [Populus trichocarpa] gi|222848776|gb|EEE86323.1|
           predicted protein [Populus trichocarpa]
          Length = 565

 Score =  154 bits (389), Expect = 6e-35
 Identities = 89/180 (49%), Positives = 116/180 (64%), Gaps = 1/180 (0%)
 Frame = +3

Query: 15  FVIFDQNDSFNQEMAISFYHNKECPDELNEAISSLIFAASRCGEFPELQEIRSVFISRFG 194
           FV+ +    F  +  +    ++ECPDEL EA+SSLIFA+SRCGEFPELQEIR VF+SRFG
Sbjct: 70  FVMMEDYLHFLNDRVVLLETSRECPDELKEAVSSLIFASSRCGEFPELQEIRGVFVSRFG 129

Query: 195 KDFAARAVELRSNCGVNRKIIQKLSTRHPSFESRMKVLQEIATENGITLHLEEEASVTAK 374
           K+ AA AVELRSNCGVN KII K S R  S ESR K+L++IA++NGI LHLEE+A V A+
Sbjct: 130 KEIAACAVELRSNCGVNPKIILKFSARQASLESRKKLLKDIASDNGIVLHLEEDAPVVAQ 189

Query: 375 EXXXXXXXXXXXKTNITVNMDNAKNGDQTPDVIEEMDQFE-RDDERSSGSLRTRKRYSDV 551
           E           +     ++++ K+     DV E   +     +E  S SL+ RK+Y DV
Sbjct: 190 EKMDVSQPKQQEQ-----HVEDFKSAKL--DVTESQARTHVLPEEELSESLKGRKKYKDV 242


>ref|XP_002329329.1| predicted protein [Populus trichocarpa] gi|222870783|gb|EEF07914.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score =  150 bits (380), Expect = 6e-34
 Identities = 90/167 (53%), Positives = 106/167 (63%)
 Frame = +3

Query: 51  EMAISFYHNKECPDELNEAISSLIFAASRCGEFPELQEIRSVFISRFGKDFAARAVELRS 230
           E  +    NKECP E  EAISSLIFA+SRCGEFPELQEIR VF +RFG +FAARAVELR 
Sbjct: 92  ERVVQLETNKECP-EFKEAISSLIFASSRCGEFPELQEIRGVFTTRFGNEFAARAVELRR 150

Query: 231 NCGVNRKIIQKLSTRHPSFESRMKVLQEIATENGITLHLEEEASVTAKEXXXXXXXXXXX 410
           NCGV+  IIQ LS R PS ESR K+L++IATENGI LHLEE+A V A+E           
Sbjct: 151 NCGVHPNIIQNLSARQPSLESRKKLLKDIATENGIILHLEEDAPVVAQENLDVDQPKQQQ 210

Query: 411 KTNITVNMDNAKNGDQTPDVIEEMDQFERDDERSSGSLRTRKRYSDV 551
               +V +D  +   +T  + E         E  SGSL+ RK Y DV
Sbjct: 211 HEYKSVKLDATEYQARTHVLPE---------EELSGSLKGRK-YKDV 247


>emb|CAN68344.1| hypothetical protein VITISV_004018 [Vitis vinifera]
          Length = 452

 Score =  150 bits (380), Expect = 6e-34
 Identities = 122/382 (31%), Positives = 174/382 (45%), Gaps = 5/382 (1%)
 Frame = +3

Query: 78   KECPDELNEAISSLIFAASRCGEFPELQEIRSVFISRFGKDFAARAVELRSNCGVNRKII 257
            K CPDEL EA S L+++ SRCGEF EL+EIR+V  SR+GK+F ARAVELR+NCGVN ++I
Sbjct: 97   KVCPDELKEAASGLLYSTSRCGEFQELREIRAVLTSRYGKEFVARAVELRNNCGVNPRLI 156

Query: 258  QKLSTRHPSFESRMKVLQEIATENGITLHLEEEASVTAKEXXXXXXXXXXXKTNITVNMD 437
            QKLS R P  E R+ VL+EIA+ENGITL LE  +S T ++           K + + N  
Sbjct: 157  QKLSVRPPDVEVRLNVLKEIASENGITLQLEGASSATLEDKLDKNQMENQPKPDQSANSG 216

Query: 438  NAKNGDQTPDVIEEMDQFERDDERSSGSLRTRKRYSDVXXXXXXXXXXXXXXXXXXXXXV 617
             AK      + +   DQ E+  E  SGS++TRK+Y DV                     V
Sbjct: 217  GAK----PEESLLPEDQIEK-GEGFSGSMKTRKKYKDVADAAQAAFESAAYAAAAARAAV 271

Query: 618  ELSQDNYXXXXXXXXXXXXXXXXXXXXXXXXAKNHVVGAASAEVENSDRLGFXXXXXXXX 797
            ELS+                              H     S E+E SD  G         
Sbjct: 272  ELSRTE------------------SHDPDDQNSPHPRRKDSGEIEKSDD-GLALEKIHPV 312

Query: 798  XXXXXXXXXWQQNHQKSHSKNSKGRAXXXXXXXXXXXXXXXXXXXXTNETNIASTIQVEI 977
                      ++ H +S ++ SK +                      N  +++S +   +
Sbjct: 313  ENQDSESED-EEIHNESQAQQSKWKKKAAELMRPMSSSSSDSAGGSLNVNSMSSDV---M 368

Query: 978  KPLEK-MAFDQSDNETKSEYDYGALPLSGEYRFGVGVKSGLSTDEFPKARQNNTMDHEEE 1154
            K LEK +  D SD+E+ +++      LS + +  + + S    D   +A   N +    E
Sbjct: 369  KLLEKDIVLDDSDDESGNKHSGN---LSSDMKPALQIPSSSQVDIKARAGPKNHIAQPAE 425

Query: 1155 ----VHLKGLNIGRRPISVRTR 1208
                  ++ LN G+RP SVRTR
Sbjct: 426  GLGMPSVQHLNTGKRPFSVRTR 447


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